RNA–Protein interactions for RNA: ENST00000624873.3

SRGAP2-217, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SRGAP2, Length 4,705 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-217ENST00000624873 KCNH4Q9UQ05 1017 aa11.31□□□□□ -0.6
SRGAP2-217ENST00000624873 SYNRGQ9UMZ2 1314 aa11.31□□□□□ -0.6
SRGAP2-217ENST00000624873 CCL15-CCL14A0A0B4J2E2 113 aa11.31□□□□□ -0.6
SRGAP2-217ENST00000624873 ATF7P17544 494 aaPredicted RBP11.31□□□□□ -0.6
SRGAP2-217ENST00000624873 RASSF7Q02833 373 aa11.31□□□□□ -0.6
SRGAP2-217ENST00000624873 NEDD9Q14511 834 aa11.31□□□□□ -0.6
SRGAP2-217ENST00000624873 CCL15Q16663 113 aa11.31□□□□□ -0.6
SRGAP2-217ENST00000624873 UBXN4Q92575 508 aa11.31□□□□□ -0.6
SRGAP2-217ENST00000624873 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.31□□□□□ -0.6
SRGAP2-217ENST00000624873 SIGLEC1Q9BZZ2 1709 aa11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 URI1O94763 535 aaPredicted RBP11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 PLEKHA8P1O95397 391 aa11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 ZSCAN20P17040 1043 aaPredicted RBP11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 RGS22Q8NE09 1264 aa11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 TEX13BQ9BXU2 312 aa11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 TMEM39BQ9GZU3 492 aa11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 PANK4Q9NVE7 773 aa11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 LRFN2Q9ULH4 789 aa11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 INO80B-WBP1J3KQ70 363 aa11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 FAM26FQ5R3K3 315 aa11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 PRAMEF18Q5VWM3 479 aa11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 ZSCAN30Q86W11 494 aa11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 INO80BQ9C086 356 aaPredicted RBP11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 BLZF1Q9H2G9 400 aa11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 MTMR4Q9NYA4 1195 aa11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 TNNC2P02585 160 aa11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 PFKFB1P16118 471 aa11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 PTGS1P23219 599 aa11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 GBP2P32456 591 aaPredicted RBP11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 PPM1FP49593 454 aaPredicted RBP11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 KIF5AQ12840 1032 aa11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 CNGA4Q8IV77 575 aa11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 FAM167AQ96KS9 214 aa11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 LRRC4BQ9NT99 713 aa11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 PPP2R3BQ9Y5P8 575 aa11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 MED1Q15648 1581 aaPredicted RBP11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 GTPBP6O43824 516 aaPredicted RBP11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 SLC39A14Q15043 492 aa11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 CCDC84Q86UT8 332 aaPredicted RBP11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 MB21D1Q8N884 522 aa11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 TMEM106CQ9BVX2 250 aa11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 PCDHA6Q9UN73 950 aa11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 PCDHA8Q9Y5H6 950 aa11.3□□□□□ -0.6
SRGAP2-217ENST00000624873 ADGRB2O60241 1585 aa11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 NMT2O60551 498 aa11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 CD19P15391 556 aa11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 QRICH1Q2TAL8 776 aa11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 ZDHHC15Q96MV8 337 aa11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 TBC1D22BQ9NU19 505 aa11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 TRMT1Q9NXH9 659 aaKnown RBP11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 IFNKQ9P0W0 207 aa11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 GOLGA6L10A0A0M3HER8 536 aa11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 DDNO94850 711 aaPredicted RBP11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 BCRP11274 1271 aa11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 GAP43P17677 238 aa11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 JAK3P52333 1124 aa11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 NLRP12P59046 1061 aa11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 PFKFB3Q16875 520 aaPredicted RBP11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 Q3C1V9 767 aa11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 TKFCQ3LXA3 575 aa11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 MB21D2Q8IYB1 491 aaPredicted RBP11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 GPC2Q8N158 579 aa11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 PSMD1Q99460 953 aa11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 TNFAIP3P21580 790 aa11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 KIF23Q02241 960 aaPredicted RBP11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 MTMR1Q13613 665 aa11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 CYB5R4Q7L1T6 521 aa11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 RDH13Q8NBN7 331 aa11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 LARP4BQ92615 738 aaKnown RBP11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 PRMT6Q96LA8 375 aaPredicted RBP11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 NACA2Q9H009 215 aa11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 GBP3Q9H0R5 595 aa11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 VPS16Q9H269 839 aa11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 VCPKMTQ9H867 229 aa11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 GBA2Q9HCG7 927 aaPredicted RBP11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 INCENPQ9NQS7 918 aa11.29□□□□□ -0.6
SRGAP2-217ENST00000624873 TACC1O75410 805 aa11.28□□□□□ -0.6
SRGAP2-217ENST00000624873 MYL3P08590 195 aa11.28□□□□□ -0.6
SRGAP2-217ENST00000624873 TRIM14Q14142 442 aa11.28□□□□□ -0.6
SRGAP2-217ENST00000624873 ARMCX5Q6P1M9 558 aa11.28□□□□□ -0.6
SRGAP2-217ENST00000624873 NELFBQ8WX92 580 aa11.28□□□□□ -0.6
SRGAP2-217ENST00000624873 JADE2Q9NQC1 790 aa11.28□□□□□ -0.6
SRGAP2-217ENST00000624873 PODXL2Q9NZ53 605 aa11.28□□□□□ -0.6
SRGAP2-217ENST00000624873 ADAMTSL3P82987 1691 aa11.28□□□□□ -0.6
SRGAP2-217ENST00000624873 SPDYE2BA6NHP3 402 aa11.28□□□□□ -0.6
SRGAP2-217ENST00000624873 KRT86O43790 486 aa11.28□□□□□ -0.6
SRGAP2-217ENST00000624873 SPDYE6P0CI01 402 aa11.28□□□□□ -0.6
SRGAP2-217ENST00000624873 RFX1P22670 979 aa11.28□□□□□ -0.6
SRGAP2-217ENST00000624873 CYP2J2P51589 502 aa11.28□□□□□ -0.6
SRGAP2-217ENST00000624873 NR5A1Q13285 461 aa11.28□□□□□ -0.6
SRGAP2-217ENST00000624873 AXDND1Q5T1B0 1012 aaPredicted RBP11.28□□□□□ -0.6
SRGAP2-217ENST00000624873 STK17AQ9UEE5 414 aa11.28□□□□□ -0.6
SRGAP2-217ENST00000624873 DISP2A7MBM2 1401 aa11.28□□□□□ -0.6
SRGAP2-217ENST00000624873 ESPNB1AK53 854 aa11.28□□□□□ -0.6
SRGAP2-217ENST00000624873 PPP6R2O75170 966 aa11.28□□□□□ -0.6
SRGAP2-217ENST00000624873 GTF2A2P52657 109 aa11.28□□□□□ -0.6
SRGAP2-217ENST00000624873 MTERF2Q49AM1 385 aa11.28□□□□□ -0.6
SRGAP2-217ENST00000624873 C16orf86Q6ZW13 317 aa11.28□□□□□ -0.6
SRGAP2-217ENST00000624873 LDHDQ86WU2 507 aa11.28□□□□□ -0.6
SRGAP2-217ENST00000624873 SYMPKQ92797 1274 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms