RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 ADAM9Q13443 819 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 SEPT6Q14141 434 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 CTAGE3PQ8IX95 158 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 RASGRP4Q8TDF6 673 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 MARF1Q9Y4F3 1742 aaKnown RBP6.18□□□□□ -1.42
ERCC6-213ENST00000624341 TECPR2O15040 1411 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 PLEKHG3A1L390 1219 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 PRAMEF22A3QJZ6 481 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 GNA14O95837 355 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 CFBP00751 764 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 EPHB4P54760 987 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 ADCY1Q08828 1119 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 LLGL1Q15334 1064 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 RBM26Q5T8P6 1007 aaKnown RBP6.18□□□□□ -1.42
ERCC6-213ENST00000624341 PI16Q6UXB8 463 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 CCDC13Q8IYE1 715 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 STAG1Q8WVM7 1258 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 LZTS2Q9BRK4 669 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 INTS9Q9NV88 658 aaKnown RBP6.18□□□□□ -1.42
ERCC6-213ENST00000624341 PCDHA12Q9UN75 941 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 I3L4J1 428 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 M0R2C6 588 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 SLFN14P0C7P3 912 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 ITIH3Q06033 890 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 FAM26FQ5R3K3 315 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 NT5C3AQ9H0P0 336 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 KLRF2D3W0D1 207 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 CD19P15391 556 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 APBA1Q02410 837 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 NNTQ13423 1086 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 GEN1Q17RS7 908 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 CCDC14Q49A88 953 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 NEK8Q86SG6 692 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 RPAINQ86UA6 219 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 GBP5Q96PP8 586 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 PANK4Q9NVE7 773 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 SSX2IPQ9Y2D8 614 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 GNPATO15228 680 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 NDUFA10O95299 355 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 MOCS3O95396 460 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 BAG2O95816 211 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 FTCDO95954 541 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 TROVE2P10155 538 aaKnown RBP eCLIP6.18□□□□□ -1.42
ERCC6-213ENST00000624341 LRRC41Q15345 812 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 ZKSCAN8Q15776 578 aaPredicted RBP6.18□□□□□ -1.42
ERCC6-213ENST00000624341 TAB3Q8N5C8 712 aaPredicted RBP6.18□□□□□ -1.42
ERCC6-213ENST00000624341 OSBP2Q969R2 916 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 EYA3Q99504 573 aa6.18□□□□□ -1.42
ERCC6-213ENST00000624341 FOXP1Q9H334 677 aaPredicted RBP6.18□□□□□ -1.42
ERCC6-213ENST00000624341 TRPC5Q9UL62 973 aaPredicted RBP6.18□□□□□ -1.42
ERCC6-213ENST00000624341 ADGRB2O60241 1585 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 PABPN1LA6NDY0 278 aaKnown RBP6.17□□□□□ -1.42
ERCC6-213ENST00000624341 TMEM232C9JQI7 657 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 THAP12O43422 761 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 SASH1O94885 1247 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 LONP1P36776 959 aaKnown RBP6.17□□□□□ -1.42
ERCC6-213ENST00000624341 CTSWP56202 376 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 CC2D1AQ6P1N0 951 aaPredicted RBP6.17□□□□□ -1.42
ERCC6-213ENST00000624341 SARM1Q6SZW1 724 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 TOGARAM2Q6ZUX3 1019 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 CCDC197Q8NCU1 140 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.17□□□□□ -1.42
ERCC6-213ENST00000624341 EPSTI1Q96J88 318 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 DDX23Q9BUQ8 820 aaKnown RBP6.17□□□□□ -1.42
ERCC6-213ENST00000624341 GLT8D2Q9H1C3 349 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 ODF2LQ9ULJ1 636 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 ATP8A1Q9Y2Q0 1164 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 PCDHB6Q9Y5E3 794 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 MED23Q9ULK4 1368 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 FMN2Q9NZ56 1722 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 SOS2Q07890 1332 aaPredicted RBP6.17□□□□□ -1.42
ERCC6-213ENST00000624341 ARHGAP42A6NI28 874 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 CTNND1O60716 968 aaKnown RBP6.17□□□□□ -1.42
ERCC6-213ENST00000624341 MYCLP12524 364 aaPredicted RBP6.17□□□□□ -1.42
ERCC6-213ENST00000624341 TCP10Q12799 353 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 TRPC3Q13507 836 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 CASC4Q6P4E1 433 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 RPUSD2Q8IZ73 545 aaKnown RBP6.17□□□□□ -1.42
ERCC6-213ENST00000624341 CPXCR1Q8N123 301 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 GJA10Q969M2 543 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 KIF2CQ99661 725 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 QTRT2Q9H974 415 aaKnown RBP6.17□□□□□ -1.42
ERCC6-213ENST00000624341 CD2APQ9Y5K6 639 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 EEF1GP26641 437 aaKnown RBP6.17□□□□□ -1.42
ERCC6-213ENST00000624341 PLTPP55058 493 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 SLFNL1Q499Z3 407 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 PHLDB2Q86SQ0 1253 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 SMCR8Q8TEV9 937 aaPredicted RBP6.17□□□□□ -1.42
ERCC6-213ENST00000624341 BTG4Q9NY30 223 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 EXOC7Q9UPT5 735 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 PTPN22Q9Y2R2 807 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 FRMPD2Q68DX3 1309 aaPredicted RBP6.17□□□□□ -1.42
ERCC6-213ENST00000624341 ARHGEF28Q8N1W1 1705 aaKnown RBP6.17□□□□□ -1.42
ERCC6-213ENST00000624341 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.17□□□□□ -1.42
ERCC6-213ENST00000624341 FMNL1O95466 1100 aaPredicted RBP6.17□□□□□ -1.42
ERCC6-213ENST00000624341 UBE3CQ15386 1083 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 PPP2R5EQ16537 467 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 PRR16Q569H4 304 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 CCDC89Q8N998 374 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 MAGOHBQ96A72 148 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms