RNA–Protein interactions for RNA: ENST00000623196.1

C9orf139-202, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 2 BASIC

Gene C9orf139, Length 4,990 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-202ENST00000623196 RIOK1Q9BRS2 568 aaKnown RBP16.29■□□□□ 0.2
C9orf139-202ENST00000623196 NOD1Q9Y239 953 aa16.29■□□□□ 0.2
C9orf139-202ENST00000623196 COL4A3BPQ9Y5P4 624 aa16.29■□□□□ 0.2
C9orf139-202ENST00000623196 BZW2Q9Y6E2 419 aaKnown RBP16.29■□□□□ 0.2
C9orf139-202ENST00000623196 IKBKBO14920 756 aa16.29■□□□□ 0.2
C9orf139-202ENST00000623196 PTGDRQ13258 359 aa16.29■□□□□ 0.2
C9orf139-202ENST00000623196 TOB2Q14106 344 aaPredicted RBP16.29■□□□□ 0.2
C9orf139-202ENST00000623196 SLC39A14Q15043 492 aa16.29■□□□□ 0.2
C9orf139-202ENST00000623196 HSP90AA5PQ58FG0 334 aa16.29■□□□□ 0.2
C9orf139-202ENST00000623196 ZMYM1Q5SVZ6 1142 aa16.29■□□□□ 0.2
C9orf139-202ENST00000623196 NXNQ6DKJ4 435 aa16.29■□□□□ 0.2
C9orf139-202ENST00000623196 FAM178BQ8IXR5 827 aa16.29■□□□□ 0.2
C9orf139-202ENST00000623196 HINFPQ9BQA5 517 aa16.29■□□□□ 0.2
C9orf139-202ENST00000623196 TUBGCP2Q9BSJ2 902 aa16.29■□□□□ 0.2
C9orf139-202ENST00000623196 SLC39A2Q9NP94 309 aa16.29■□□□□ 0.2
C9orf139-202ENST00000623196 GJB4Q9NTQ9 266 aa16.29■□□□□ 0.2
C9orf139-202ENST00000623196 WDR46O15213 610 aaKnown RBP16.29■□□□□ 0.2
C9orf139-202ENST00000623196 LONP1P36776 959 aaKnown RBP16.29■□□□□ 0.2
C9orf139-202ENST00000623196 IL9RQ01113 521 aa16.29■□□□□ 0.2
C9orf139-202ENST00000623196 CUL4BQ13620 913 aa16.29■□□□□ 0.2
C9orf139-202ENST00000623196 PANK4Q9NVE7 773 aa16.29■□□□□ 0.2
C9orf139-202ENST00000623196 FAM170AA1A519 330 aa16.29■□□□□ 0.2
C9orf139-202ENST00000623196 FNBP4Q8N3X1 1017 aaPredicted RBP16.29■□□□□ 0.2
C9orf139-202ENST00000623196 PNMA1Q8ND90 353 aa16.29■□□□□ 0.2
C9orf139-202ENST00000623196 DEPTORQ8TB45 409 aa16.29■□□□□ 0.2
C9orf139-202ENST00000623196 RCOR1Q9UKL0 485 aa16.29■□□□□ 0.2
C9orf139-202ENST00000623196 PTPN12Q05209 780 aaKnown RBP16.28■□□□□ 0.2
C9orf139-202ENST00000623196 BFSP1Q12934 665 aa16.28■□□□□ 0.2
C9orf139-202ENST00000623196 TCIRG1Q13488 830 aa16.28■□□□□ 0.2
C9orf139-202ENST00000623196 TMCO4Q5TGY1 634 aa16.28■□□□□ 0.2
C9orf139-202ENST00000623196 NAA35Q5VZE5 725 aa16.28■□□□□ 0.2
C9orf139-202ENST00000623196 PPM1KQ8N3J5 372 aa16.28■□□□□ 0.2
C9orf139-202ENST00000623196 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.28■□□□□ 0.2
C9orf139-202ENST00000623196 TSPYL2Q9H2G4 693 aaPredicted RBP16.28■□□□□ 0.2
C9orf139-202ENST00000623196 PPP1R9AQ9ULJ8 1098 aa16.28■□□□□ 0.2
C9orf139-202ENST00000623196 PDE6CP51160 858 aa16.28■□□□□ 0.2
C9orf139-202ENST00000623196 KRT81Q14533 505 aa16.28■□□□□ 0.2
C9orf139-202ENST00000623196 MIER3Q7Z3K6 550 aa16.28■□□□□ 0.2
C9orf139-202ENST00000623196 FAF1Q9UNN5 650 aaPredicted RBP16.28■□□□□ 0.2
C9orf139-202ENST00000623196 A0A087WUV0 522 aaPredicted RBP16.28■□□□□ 0.2
C9orf139-202ENST00000623196 ENC1O14682 589 aa16.28■□□□□ 0.2
C9orf139-202ENST00000623196 SART1O43290 800 aaKnown RBP16.28■□□□□ 0.2
C9orf139-202ENST00000623196 SMIM24O75264 130 aa16.28■□□□□ 0.2
C9orf139-202ENST00000623196 PDE6AP16499 860 aa16.28■□□□□ 0.2
C9orf139-202ENST00000623196 EXOC3L4Q17RC7 722 aa16.28■□□□□ 0.2
C9orf139-202ENST00000623196 EPHA10Q5JZY3 1008 aa16.28■□□□□ 0.2
C9orf139-202ENST00000623196 TTC19Q6DKK2 380 aaPredicted RBP16.28■□□□□ 0.2
C9orf139-202ENST00000623196 PGBD1Q96JS3 809 aa16.28■□□□□ 0.2
C9orf139-202ENST00000623196 NACA2Q9H009 215 aa16.28■□□□□ 0.2
C9orf139-202ENST00000623196 PSTPIP2Q9H939 334 aa16.28■□□□□ 0.2
C9orf139-202ENST00000623196 TULP4Q9NRJ4 1543 aa16.28■□□□□ 0.2
C9orf139-202ENST00000623196 SEC31AO94979 1220 aaKnown RBP16.28■□□□□ 0.2
C9orf139-202ENST00000623196 POLR2BP30876 1174 aaKnown RBP16.28■□□□□ 0.2
C9orf139-202ENST00000623196 RASSF7Q02833 373 aa16.28■□□□□ 0.2
C9orf139-202ENST00000623196 MAGOHBQ96A72 148 aaKnown RBP16.28■□□□□ 0.2
C9orf139-202ENST00000623196 AIFM3Q96NN9 605 aa16.28■□□□□ 0.2
C9orf139-202ENST00000623196 IVNS1ABPQ9Y6Y0 642 aa16.28■□□□□ 0.2
C9orf139-202ENST00000623196 PPFIA2O75334 1257 aa16.27■□□□□ 0.2
C9orf139-202ENST00000623196 NAA30Q147X3 362 aaPredicted RBP16.27■□□□□ 0.2
C9orf139-202ENST00000623196 AOC3Q16853 763 aa16.27■□□□□ 0.2
C9orf139-202ENST00000623196 RETREG2Q8NC44 543 aa16.27■□□□□ 0.2
C9orf139-202ENST00000623196 CHURC1Q8WUH1 139 aa16.27■□□□□ 0.2
C9orf139-202ENST00000623196 SYMPKQ92797 1274 aaKnown RBP16.27■□□□□ 0.2
C9orf139-202ENST00000623196 CHD1O14646 1710 aa16.27■□□□□ 0.2
C9orf139-202ENST00000623196 PHLPP2Q6ZVD8 1323 aa16.27■□□□□ 0.2
C9orf139-202ENST00000623196 ECM2O94769 699 aaPredicted RBP16.27■□□□□ 0.2
C9orf139-202ENST00000623196 RNASELQ05823 741 aaKnown RBP16.27■□□□□ 0.2
C9orf139-202ENST00000623196 SCYL2Q6P3W7 929 aa16.27■□□□□ 0.2
C9orf139-202ENST00000623196 CCDC24Q8N4L8 307 aa16.27■□□□□ 0.2
C9orf139-202ENST00000623196 MIS12Q9H081 205 aa16.27■□□□□ 0.2
C9orf139-202ENST00000623196 MAGEF1Q9HAY2 307 aa16.27■□□□□ 0.2
C9orf139-202ENST00000623196 TPX2Q9ULW0 747 aaKnown RBP16.27■□□□□ 0.2
C9orf139-202ENST00000623196 EEF1GP26641 437 aaKnown RBP16.27■□□□□ 0.19
C9orf139-202ENST00000623196 SERPINB6P35237 376 aa16.27■□□□□ 0.19
C9orf139-202ENST00000623196 PRR16Q569H4 304 aa16.27■□□□□ 0.19
C9orf139-202ENST00000623196 BANK1Q8NDB2 785 aa16.27■□□□□ 0.19
C9orf139-202ENST00000623196 C8orf37Q96NL8 207 aa16.27■□□□□ 0.19
C9orf139-202ENST00000623196 KLRF2D3W0D1 207 aa16.27■□□□□ 0.19
C9orf139-202ENST00000623196 RNF8O76064 485 aa16.27■□□□□ 0.19
C9orf139-202ENST00000623196 SLFN12Q8IYM2 578 aa16.27■□□□□ 0.19
C9orf139-202ENST00000623196 LINC00301Q8NCQ3 95 aa16.27■□□□□ 0.19
C9orf139-202ENST00000623196 SDR42E1Q8WUS8 393 aa16.27■□□□□ 0.19
C9orf139-202ENST00000623196 TCP11Q8WWU5 503 aa16.27■□□□□ 0.19
C9orf139-202ENST00000623196 EXOC4Q96A65 974 aa16.27■□□□□ 0.19
C9orf139-202ENST00000623196 EEF2KMTQ96G04 330 aa16.27■□□□□ 0.19
C9orf139-202ENST00000623196 HEXIM1O94992 359 aaKnown RBP16.26■□□□□ 0.19
C9orf139-202ENST00000623196 YARSP54577 528 aaKnown RBP16.26■□□□□ 0.19
C9orf139-202ENST00000623196 ARMC9Q7Z3E5 817 aa16.26■□□□□ 0.19
C9orf139-202ENST00000623196 TRIM50Q86XT4 487 aa16.26■□□□□ 0.19
C9orf139-202ENST00000623196 GRAMD1CQ8IYS0 662 aa16.26■□□□□ 0.19
C9orf139-202ENST00000623196 PRPF31Q8WWY3 499 aaKnown RBP16.26■□□□□ 0.19
C9orf139-202ENST00000623196 OSBP2Q969R2 916 aa16.26■□□□□ 0.19
C9orf139-202ENST00000623196 CNOT6LQ96LI5 555 aaKnown RBP16.26■□□□□ 0.19
C9orf139-202ENST00000623196 DAAM1Q9Y4D1 1078 aa16.26■□□□□ 0.19
C9orf139-202ENST00000623196 LMNB2Q03252 620 aa16.26■□□□□ 0.19
C9orf139-202ENST00000623196 GRM1Q13255 1194 aa16.26■□□□□ 0.19
C9orf139-202ENST00000623196 RPAINQ86UA6 219 aa16.26■□□□□ 0.19
C9orf139-202ENST00000623196 SPATS2LQ9NUQ6 558 aaKnown RBP16.26■□□□□ 0.19
C9orf139-202ENST00000623196 BTG4Q9NY30 223 aa16.26■□□□□ 0.19
C9orf139-202ENST00000623196 MYO1FO00160 1098 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms