RNA–Protein interactions for RNA: ENST00000622978.1

PCDHB12-202, Transcript of protocadherin beta 12, humanhuman

TSL 2 BASIC

Gene PCDHB12, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12-202ENST00000622978 TRMT44Q8IYL2 757 aaKnown RBP22.69■■□□□ 1.22
PCDHB12-202ENST00000622978 USP17L15C9J2P7 530 aa22.69■■□□□ 1.22
PCDHB12-202ENST00000622978 USP17L13C9JLJ4 530 aa22.69■■□□□ 1.22
PCDHB12-202ENST00000622978 USP17L11C9JVI0 530 aa22.69■■□□□ 1.22
PCDHB12-202ENST00000622978 USP17L18D6R9N7 530 aa22.69■■□□□ 1.22
PCDHB12-202ENST00000622978 USP17L22D6RA61 530 aa22.69■■□□□ 1.22
PCDHB12-202ENST00000622978 USP17L17D6RBQ6 530 aa22.69■■□□□ 1.22
PCDHB12-202ENST00000622978 USP17L19D6RCP7 530 aa22.69■■□□□ 1.22
PCDHB12-202ENST00000622978 USP17L20D6RJB6 530 aa22.69■■□□□ 1.22
PCDHB12-202ENST00000622978 MYL1P05976 194 aa22.69■■□□□ 1.22
PCDHB12-202ENST00000622978 FXR2P51116 673 aaKnown RBP eCLIP22.69■■□□□ 1.22
PCDHB12-202ENST00000622978 SNAP25P60880 206 aa22.69■■□□□ 1.22
PCDHB12-202ENST00000622978 MAP3K10Q02779 954 aa22.69■■□□□ 1.22
PCDHB12-202ENST00000622978 RASSF7Q02833 373 aa22.69■■□□□ 1.22
PCDHB12-202ENST00000622978 USP17L24Q0WX57 530 aa22.69■■□□□ 1.22
PCDHB12-202ENST00000622978 USP17L6PQ6QN14 398 aa22.69■■□□□ 1.22
PCDHB12-202ENST00000622978 SH2D4AQ9H788 454 aa22.69■■□□□ 1.22
PCDHB12-202ENST00000622978 IMPACTQ9P2X3 320 aa22.69■■□□□ 1.22
PCDHB12-202ENST00000622978 RPN1P04843 607 aaKnown RBP22.68■■□□□ 1.22
PCDHB12-202ENST00000622978 AP3B2Q13367 1082 aa22.68■■□□□ 1.22
PCDHB12-202ENST00000622978 FILIP1Q7Z7B0 1213 aa22.68■■□□□ 1.22
PCDHB12-202ENST00000622978 RAB34Q9BZG1 259 aa22.68■■□□□ 1.22
PCDHB12-202ENST00000622978 DDX25Q9UHL0 483 aaKnown RBP22.68■■□□□ 1.22
PCDHB12-202ENST00000622978 PRR12Q9ULL5 1215 aa22.68■■□□□ 1.22
PCDHB12-202ENST00000622978 PLCG1P19174 1290 aa22.67■■□□□ 1.22
PCDHB12-202ENST00000622978 PTGER2P43116 358 aa22.67■■□□□ 1.22
PCDHB12-202ENST00000622978 UBASH3AP57075 661 aa22.67■■□□□ 1.22
PCDHB12-202ENST00000622978 RASA3Q14644 834 aa22.67■■□□□ 1.22
PCDHB12-202ENST00000622978 ARID5BQ14865 1188 aa22.67■■□□□ 1.22
PCDHB12-202ENST00000622978 MCTP2Q6DN12 878 aa22.67■■□□□ 1.22
PCDHB12-202ENST00000622978 PLIN2Q99541 437 aa22.67■■□□□ 1.22
PCDHB12-202ENST00000622978 ANO3Q9BYT9 981 aa22.67■■□□□ 1.22
PCDHB12-202ENST00000622978 KBTBD4Q9NVX7 518 aa22.67■■□□□ 1.22
PCDHB12-202ENST00000622978 SYNRGQ9UMZ2 1314 aa22.67■■□□□ 1.22
PCDHB12-202ENST00000622978 CD44P16070 742 aaKnown RBP22.67■■□□□ 1.22
PCDHB12-202ENST00000622978 GMPSP49915 693 aaPredicted RBP22.67■■□□□ 1.22
PCDHB12-202ENST00000622978 GSDMDP57764 484 aa22.67■■□□□ 1.22
PCDHB12-202ENST00000622978 USH1GQ495M9 461 aa22.67■■□□□ 1.22
PCDHB12-202ENST00000622978 KIAA1755Q5JYT7 1200 aa22.67■■□□□ 1.22
PCDHB12-202ENST00000622978 MICALL2Q8IY33 904 aa22.67■■□□□ 1.22
PCDHB12-202ENST00000622978 VCPKMTQ9H867 229 aa22.67■■□□□ 1.22
PCDHB12-202ENST00000622978 MEIS2O14770 477 aa22.66■■□□□ 1.22
PCDHB12-202ENST00000622978 EGFRP00533 1210 aa22.66■■□□□ 1.22
PCDHB12-202ENST00000622978 ASNSP08243 561 aa22.66■■□□□ 1.22
PCDHB12-202ENST00000622978 FAM83BQ5T0W9 1011 aa22.66■■□□□ 1.22
PCDHB12-202ENST00000622978 SMYD4Q8IYR2 804 aaPredicted RBP22.66■■□□□ 1.22
PCDHB12-202ENST00000622978 DPF2Q92785 391 aa22.66■■□□□ 1.22
PCDHB12-202ENST00000622978 CALML4Q96GE6 196 aa22.66■■□□□ 1.22
PCDHB12-202ENST00000622978 MED15Q96RN5 788 aa22.66■■□□□ 1.22
PCDHB12-202ENST00000622978 LRWD1Q9UFC0 647 aa22.66■■□□□ 1.22
PCDHB12-202ENST00000622978 PPP1R3GB7ZBB8 358 aa22.66■■□□□ 1.22
PCDHB12-202ENST00000622978 FZD9O00144 591 aa22.66■■□□□ 1.22
PCDHB12-202ENST00000622978 ZNF18P17022 549 aa22.66■■□□□ 1.22
PCDHB12-202ENST00000622978 KLHL10Q6JEL2 608 aa22.66■■□□□ 1.22
PCDHB12-202ENST00000622978 MMTAG2Q9BU76 263 aaKnown RBP22.66■■□□□ 1.22
PCDHB12-202ENST00000622978 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.66■■□□□ 1.22
PCDHB12-202ENST00000622978 USP11P51784 963 aa22.65■■□□□ 1.22
PCDHB12-202ENST00000622978 TRAF1Q13077 416 aa22.65■■□□□ 1.22
PCDHB12-202ENST00000622978 PDIA5Q14554 519 aa22.65■■□□□ 1.22
PCDHB12-202ENST00000622978 ZNF658Q5TYW1 1059 aaPredicted RBP22.65■■□□□ 1.22
PCDHB12-202ENST00000622978 TMC6Q7Z403 805 aa22.65■■□□□ 1.22
PCDHB12-202ENST00000622978 ATAD5Q96QE3 1844 aa22.65■■□□□ 1.22
PCDHB12-202ENST00000622978 PSDA5PKW4 1024 aaPredicted RBP22.64■■□□□ 1.22
PCDHB12-202ENST00000622978 SPATA1Q5VX52 437 aa22.64■■□□□ 1.22
PCDHB12-202ENST00000622978 LRRC15Q8TF66 581 aa22.64■■□□□ 1.22
PCDHB12-202ENST00000622978 UPF1Q92900 1129 aaKnown RBP eCLIP22.64■■□□□ 1.22
PCDHB12-202ENST00000622978 GJA3Q9Y6H8 435 aa22.64■■□□□ 1.22
PCDHB12-202ENST00000622978 CDK11BP21127 795 aaKnown RBP22.64■■□□□ 1.21
PCDHB12-202ENST00000622978 SEMA3FQ13275 785 aa22.64■■□□□ 1.21
PCDHB12-202ENST00000622978 CHURC1Q8WUH1 139 aa22.64■■□□□ 1.21
PCDHB12-202ENST00000622978 TEPSINQ96N21 525 aa22.64■■□□□ 1.21
PCDHB12-202ENST00000622978 SCAF8Q9UPN6 1271 aaKnown RBP22.64■■□□□ 1.21
PCDHB12-202ENST00000622978 GTF2F1P35269 517 aaKnown RBP eCLIP22.63■■□□□ 1.21
PCDHB12-202ENST00000622978 PRELPP51888 382 aa22.63■■□□□ 1.21
PCDHB12-202ENST00000622978 KCNB1Q14721 858 aa22.63■■□□□ 1.21
PCDHB12-202ENST00000622978 ZYXQ15942 572 aaKnown RBP22.63■■□□□ 1.21
PCDHB12-202ENST00000622978 CNOT7Q9UIV1 285 aaKnown RBP22.63■■□□□ 1.21
PCDHB12-202ENST00000622978 CTNND2Q9UQB3 1225 aa22.63■■□□□ 1.21
PCDHB12-202ENST00000622978 MARCH6O60337 910 aa22.62■■□□□ 1.21
PCDHB12-202ENST00000622978 FOSP01100 380 aaPredicted RBP22.62■■□□□ 1.21
PCDHB12-202ENST00000622978 DHX8Q14562 1220 aaKnown RBP22.62■■□□□ 1.21
PCDHB12-202ENST00000622978 HSP90AA4PQ58FG1 418 aa22.62■■□□□ 1.21
PCDHB12-202ENST00000622978 MOXD1Q6UVY6 613 aa22.62■■□□□ 1.21
PCDHB12-202ENST00000622978 SAMD7Q7Z3H4 446 aa22.62■■□□□ 1.21
PCDHB12-202ENST00000622978 C16orf45Q96MC5 204 aaPredicted RBP22.62■■□□□ 1.21
PCDHB12-202ENST00000622978 POTEMA6NI47 508 aa22.62■■□□□ 1.21
PCDHB12-202ENST00000622978 SPDYE3A6NKU9 549 aa22.62■■□□□ 1.21
PCDHB12-202ENST00000622978 PHF20L1A8MW92 1017 aa22.62■■□□□ 1.21
PCDHB12-202ENST00000622978 SKILP12757 684 aa22.62■■□□□ 1.21
PCDHB12-202ENST00000622978 STX17P56962 302 aa22.62■■□□□ 1.21
PCDHB12-202ENST00000622978 FAM160B2Q86V87 743 aa22.62■■□□□ 1.21
PCDHB12-202ENST00000622978 NLGN2Q8NFZ4 835 aa22.62■■□□□ 1.21
PCDHB12-202ENST00000622978 HAS1Q92839 578 aa22.62■■□□□ 1.21
PCDHB12-202ENST00000622978 CDK5RAP3Q96JB5 506 aa22.62■■□□□ 1.21
PCDHB12-202ENST00000622978 SAMSN1Q9NSI8 373 aaKnown RBP22.62■■□□□ 1.21
PCDHB12-202ENST00000622978 STK17AQ9UEE5 414 aa22.62■■□□□ 1.21
PCDHB12-202ENST00000622978 CYP3A7-CYP3A51PA0A087WV96 503 aa22.61■■□□□ 1.21
PCDHB12-202ENST00000622978 PLA2G6O60733 806 aa22.61■■□□□ 1.21
PCDHB12-202ENST00000622978 CYP3A7P24462 503 aa22.61■■□□□ 1.21
PCDHB12-202ENST00000622978 TPD52L1Q16890 204 aaPredicted RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms