RNA–Protein interactions for RNA: ENST00000622454.4

EPB42-210, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best) BASIC

Gene EPB42, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-210ENST00000622454 LRWD1Q9UFC0 647 aa15.72■□□□□ 0.11
EPB42-210ENST00000622454 F5H6K3 240 aa15.71■□□□□ 0.11
EPB42-210ENST00000622454 KLRC3Q07444 240 aa15.71■□□□□ 0.11
EPB42-210ENST00000622454 STIM1Q13586 685 aa15.71■□□□□ 0.11
EPB42-210ENST00000622454 RBM26Q5T8P6 1007 aaKnown RBP15.71■□□□□ 0.11
EPB42-210ENST00000622454 RSBN1LQ6PCB5 846 aaPredicted RBP15.71■□□□□ 0.11
EPB42-210ENST00000622454 TC2NQ8N9U0 490 aa15.71■□□□□ 0.11
EPB42-210ENST00000622454 GIMAP8Q8ND71 665 aaPredicted RBP15.71■□□□□ 0.11
EPB42-210ENST00000622454 CCDC47Q96A33 483 aaKnown RBP15.71■□□□□ 0.11
EPB42-210ENST00000622454 PPP1R13BQ96KQ4 1090 aa15.71■□□□□ 0.11
EPB42-210ENST00000622454 MAPK8IP1Q9UQF2 711 aa15.71■□□□□ 0.11
EPB42-210ENST00000622454 PCDHA1Q9Y5I3 950 aa15.71■□□□□ 0.11
EPB42-210ENST00000622454 LRRC10BA6NIK2 292 aa15.71■□□□□ 0.1
EPB42-210ENST00000622454 ARHGAP6O43182 974 aa15.71■□□□□ 0.1
EPB42-210ENST00000622454 TEX33O43247 280 aa15.71■□□□□ 0.1
EPB42-210ENST00000622454 GCFC2P16383 781 aaKnown RBP15.71■□□□□ 0.1
EPB42-210ENST00000622454 GOLGA8FQ08AF8 430 aa15.71■□□□□ 0.1
EPB42-210ENST00000622454 GOLGA8DPQ0D2H9 430 aa15.71■□□□□ 0.1
EPB42-210ENST00000622454 CDC37Q16543 378 aaPredicted RBP15.71■□□□□ 0.1
EPB42-210ENST00000622454 FCHSD1Q86WN1 690 aa15.71■□□□□ 0.1
EPB42-210ENST00000622454 TMEM139Q8IV31 216 aa15.71■□□□□ 0.1
EPB42-210ENST00000622454 ANKRD20A12PQ8NF67 263 aa15.71■□□□□ 0.1
EPB42-210ENST00000622454 ZNF592Q92610 1267 aa15.71■□□□□ 0.1
EPB42-210ENST00000622454 GMCL1Q96IK5 515 aa15.71■□□□□ 0.1
EPB42-210ENST00000622454 C7orf25Q9BPX7 421 aa15.71■□□□□ 0.1
EPB42-210ENST00000622454 TRIM9Q9C026 710 aa15.71■□□□□ 0.1
EPB42-210ENST00000622454 LIMA1Q9UHB6 759 aaKnown RBP15.71■□□□□ 0.1
EPB42-210ENST00000622454 HERC5Q9UII4 1024 aaKnown RBP15.71■□□□□ 0.1
EPB42-210ENST00000622454 SPDYE2BA6NHP3 402 aa15.7■□□□□ 0.1
EPB42-210ENST00000622454 H7C1D1 291 aa15.7■□□□□ 0.1
EPB42-210ENST00000622454 STX10O60499 249 aa15.7■□□□□ 0.1
EPB42-210ENST00000622454 SPDYE6P0CI01 402 aa15.7■□□□□ 0.1
EPB42-210ENST00000622454 NAP1L4Q99733 375 aaKnown RBP15.7■□□□□ 0.1
EPB42-210ENST00000622454 BAG1Q99933 345 aaPredicted RBP15.7■□□□□ 0.1
EPB42-210ENST00000622454 GTPBP4Q9BZE4 634 aaKnown RBP15.7■□□□□ 0.1
EPB42-210ENST00000622454 STK17AQ9UEE5 414 aa15.7■□□□□ 0.1
EPB42-210ENST00000622454 DDX25Q9UHL0 483 aaKnown RBP15.7■□□□□ 0.1
EPB42-210ENST00000622454 HDAC9Q9UKV0 1011 aa15.7■□□□□ 0.1
EPB42-210ENST00000622454 COL4A5P29400 1685 aa15.7■□□□□ 0.1
EPB42-210ENST00000622454 PSMD14O00487 310 aa15.7■□□□□ 0.1
EPB42-210ENST00000622454 PSMA7O14818 248 aa15.7■□□□□ 0.1
EPB42-210ENST00000622454 COBLO75128 1261 aa15.7■□□□□ 0.1
EPB42-210ENST00000622454 GH2P01242 217 aa15.7■□□□□ 0.1
EPB42-210ENST00000622454 VIL1P09327 827 aaKnown RBP15.7■□□□□ 0.1
EPB42-210ENST00000622454 PBX1P40424 430 aa15.7■□□□□ 0.1
EPB42-210ENST00000622454 ADKP55263 362 aaKnown RBP15.7■□□□□ 0.1
EPB42-210ENST00000622454 KRT31Q15323 416 aa15.7■□□□□ 0.1
EPB42-210ENST00000622454 OGFOD1Q8N543 542 aa15.7■□□□□ 0.1
EPB42-210ENST00000622454 TUBB4AP04350 444 aa15.69■□□□□ 0.1
EPB42-210ENST00000622454 DALRD3Q5D0E6 543 aaKnown RBP15.69■□□□□ 0.1
EPB42-210ENST00000622454 TCP11X2Q5H9J9 407 aa15.69■□□□□ 0.1
EPB42-210ENST00000622454 KIF18AQ8NI77 898 aa15.69■□□□□ 0.1
EPB42-210ENST00000622454 CDK5RAP3Q96JB5 506 aa15.69■□□□□ 0.1
EPB42-210ENST00000622454 SYNPO2Q9UMS6 1093 aa15.69■□□□□ 0.1
EPB42-210ENST00000622454 KCNJ18B7U540 433 aa15.68■□□□□ 0.1
EPB42-210ENST00000622454 TCP10L2B9ZVM9 353 aa15.68■□□□□ 0.1
EPB42-210ENST00000622454 NDUFB10O96000 172 aa15.68■□□□□ 0.1
EPB42-210ENST00000622454 ASIC1P78348 528 aa15.68■□□□□ 0.1
EPB42-210ENST00000622454 GRB10Q13322 594 aa15.68■□□□□ 0.1
EPB42-210ENST00000622454 KCNJ12Q14500 433 aa15.68■□□□□ 0.1
EPB42-210ENST00000622454 DLGAP5Q15398 846 aa15.68■□□□□ 0.1
EPB42-210ENST00000622454 SV2BQ7L1I2 683 aa15.68■□□□□ 0.1
EPB42-210ENST00000622454 PPFIBP1Q86W92 1011 aa15.68■□□□□ 0.1
EPB42-210ENST00000622454 GMLQ99445 158 aa15.68■□□□□ 0.1
EPB42-210ENST00000622454 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.68■□□□□ 0.1
EPB42-210ENST00000622454 EXOC1Q9NV70 894 aa15.68■□□□□ 0.1
EPB42-210ENST00000622454 POTEMA6NI47 508 aa15.68■□□□□ 0.1
EPB42-210ENST00000622454 USP17L15C9J2P7 530 aa15.68■□□□□ 0.1
EPB42-210ENST00000622454 USP17L13C9JLJ4 530 aa15.68■□□□□ 0.1
EPB42-210ENST00000622454 AKR1B15C9JRZ8 316 aaPredicted RBP15.68■□□□□ 0.1
EPB42-210ENST00000622454 USP17L11C9JVI0 530 aa15.68■□□□□ 0.1
EPB42-210ENST00000622454 USP17L18D6R9N7 530 aa15.68■□□□□ 0.1
EPB42-210ENST00000622454 USP17L22D6RA61 530 aa15.68■□□□□ 0.1
EPB42-210ENST00000622454 USP17L17D6RBQ6 530 aa15.68■□□□□ 0.1
EPB42-210ENST00000622454 USP17L19D6RCP7 530 aa15.68■□□□□ 0.1
EPB42-210ENST00000622454 USP17L20D6RJB6 530 aa15.68■□□□□ 0.1
EPB42-210ENST00000622454 N4BP3O15049 544 aa15.68■□□□□ 0.1
EPB42-210ENST00000622454 CCT6AP40227 531 aaKnown RBP15.68■□□□□ 0.1
EPB42-210ENST00000622454 JAG1P78504 1218 aa15.68■□□□□ 0.1
EPB42-210ENST00000622454 PDE4DQ08499 809 aa15.68■□□□□ 0.1
EPB42-210ENST00000622454 USP17L24Q0WX57 530 aa15.68■□□□□ 0.1
EPB42-210ENST00000622454 KRT79Q5XKE5 535 aa15.68■□□□□ 0.1
EPB42-210ENST00000622454 USP17L6PQ6QN14 398 aa15.68■□□□□ 0.1
EPB42-210ENST00000622454 NIM1KQ8IY84 436 aa15.68■□□□□ 0.1
EPB42-210ENST00000622454 DHTKD1Q96HY7 919 aaPredicted RBP15.68■□□□□ 0.1
EPB42-210ENST00000622454 PANX2Q96RD6 677 aa15.68■□□□□ 0.1
EPB42-210ENST00000622454 AMNQ9BXJ7 453 aa15.68■□□□□ 0.1
EPB42-210ENST00000622454 VPS33BQ9H267 617 aa15.68■□□□□ 0.1
EPB42-210ENST00000622454 ZBTB12Q9Y330 459 aaPredicted RBP15.68■□□□□ 0.1
EPB42-210ENST00000622454 ITIH6Q6UXX5 1313 aa15.68■□□□□ 0.1
EPB42-210ENST00000622454 ZSCAN12O43309 604 aa15.67■□□□□ 0.1
EPB42-210ENST00000622454 CTIFO43310 598 aaKnown RBP15.67■□□□□ 0.1
EPB42-210ENST00000622454 BMP3P12645 472 aa15.67■□□□□ 0.1
EPB42-210ENST00000622454 PPP1R2P41236 205 aa15.67■□□□□ 0.1
EPB42-210ENST00000622454 USP11P51784 963 aa15.67■□□□□ 0.1
EPB42-210ENST00000622454 IKQ13123 557 aaPredicted RBP15.67■□□□□ 0.1
EPB42-210ENST00000622454 MCTP2Q6DN12 878 aa15.67■□□□□ 0.1
EPB42-210ENST00000622454 FAM151AQ8WW52 585 aa15.67■□□□□ 0.1
EPB42-210ENST00000622454 LARP4BQ92615 738 aaKnown RBP15.67■□□□□ 0.1
EPB42-210ENST00000622454 NUP88Q99567 741 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms