RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 APPP05067 770 aa6.85□□□□□ -1.31
CPNE3-213ENST00000622183 FOSL1P15407 271 aa6.85□□□□□ -1.31
CPNE3-213ENST00000622183 LTKP29376 864 aa6.85□□□□□ -1.31
CPNE3-213ENST00000622183 FLT3P36888 993 aa6.85□□□□□ -1.31
CPNE3-213ENST00000622183 CDKN1CP49918 316 aaPredicted RBP6.85□□□□□ -1.31
CPNE3-213ENST00000622183 DDX46Q7L014 1031 aaKnown RBP6.85□□□□□ -1.31
CPNE3-213ENST00000622183 IFNL3Q8IZI9 196 aa6.85□□□□□ -1.31
CPNE3-213ENST00000622183 DIO2Q92813 273 aa6.85□□□□□ -1.31
CPNE3-213ENST00000622183 MMP19Q99542 508 aa6.85□□□□□ -1.31
CPNE3-213ENST00000622183 METTL14Q9HCE5 456 aaKnown RBP6.85□□□□□ -1.31
CPNE3-213ENST00000622183 AP5S1Q9NUS5 200 aa6.85□□□□□ -1.31
CPNE3-213ENST00000622183 MCM8Q9UJA3 840 aa6.85□□□□□ -1.31
CPNE3-213ENST00000622183 PCDHA9Q9Y5H5 950 aa6.85□□□□□ -1.31
CPNE3-213ENST00000622183 NPHP3-ACAD11A0A0J9YXS1 232 aa6.84□□□□□ -1.31
CPNE3-213ENST00000622183 TMEM82A0PJX8 343 aa6.84□□□□□ -1.31
CPNE3-213ENST00000622183 ARVCFO00192 962 aa6.84□□□□□ -1.31
CPNE3-213ENST00000622183 FKTNO75072 461 aa6.84□□□□□ -1.31
CPNE3-213ENST00000622183 JMJD7P0C870 316 aa6.84□□□□□ -1.31
CPNE3-213ENST00000622183 PAMP19021 973 aa6.84□□□□□ -1.31
CPNE3-213ENST00000622183 NEK4P51957 841 aa6.84□□□□□ -1.31
CPNE3-213ENST00000622183 DOC2BQ14184 412 aa6.84□□□□□ -1.31
CPNE3-213ENST00000622183 NKAPLQ5M9Q1 402 aa6.84□□□□□ -1.31
CPNE3-213ENST00000622183 ZCCHC8Q6NZY4 707 aaKnown RBP6.84□□□□□ -1.31
CPNE3-213ENST00000622183 PKN3Q6P5Z2 889 aa6.84□□□□□ -1.31
CPNE3-213ENST00000622183 LBX2Q6XYB7 198 aa6.84□□□□□ -1.31
CPNE3-213ENST00000622183 MTDHQ86UE4 582 aaKnown RBP6.84□□□□□ -1.31
CPNE3-213ENST00000622183 CREG2Q8IUH2 290 aa6.84□□□□□ -1.31
CPNE3-213ENST00000622183 TMEM151AQ8N4L1 468 aa6.84□□□□□ -1.31
CPNE3-213ENST00000622183 LEO1Q8WVC0 666 aaPredicted RBP6.84□□□□□ -1.31
CPNE3-213ENST00000622183 PTCHD1Q96NR3 888 aa6.84□□□□□ -1.31
CPNE3-213ENST00000622183 CDADC1Q9BWV3 514 aa6.84□□□□□ -1.31
CPNE3-213ENST00000622183 MTFR1LQ9H019 292 aa6.84□□□□□ -1.31
CPNE3-213ENST00000622183 IRF2BPLQ9H1B7 796 aa6.84□□□□□ -1.31
CPNE3-213ENST00000622183 ATP13A1Q9HD20 1204 aa6.84□□□□□ -1.31
CPNE3-213ENST00000622183 PRR19A6NJB7 356 aa6.83□□□□□ -1.32
CPNE3-213ENST00000622183 ESR1P03372 595 aa6.83□□□□□ -1.32
CPNE3-213ENST00000622183 CPEP16870 476 aa6.83□□□□□ -1.32
CPNE3-213ENST00000622183 TEKQ02763 1124 aa6.83□□□□□ -1.32
CPNE3-213ENST00000622183 PCBP1Q15365 356 aaKnown RBP eCLIP6.83□□□□□ -1.32
CPNE3-213ENST00000622183 DHCR24Q15392 516 aa6.83□□□□□ -1.32
CPNE3-213ENST00000622183 RSPO4Q2I0M5 234 aaPredicted RBP6.83□□□□□ -1.32
CPNE3-213ENST00000622183 PLEKHG6Q3KR16 790 aa6.83□□□□□ -1.32
CPNE3-213ENST00000622183 CFAP100Q494V2 611 aa6.83□□□□□ -1.32
CPNE3-213ENST00000622183 CYP2R1Q6VVX0 501 aa6.83□□□□□ -1.32
CPNE3-213ENST00000622183 UBE2R2Q712K3 238 aaPredicted RBP6.83□□□□□ -1.32
CPNE3-213ENST00000622183 ANKLE2Q86XL3 938 aa6.83□□□□□ -1.32
CPNE3-213ENST00000622183 ORAI3Q9BRQ5 295 aa6.83□□□□□ -1.32
CPNE3-213ENST00000622183 ALG1Q9BT22 464 aa6.83□□□□□ -1.32
CPNE3-213ENST00000622183 HOMER2Q9NSB8 354 aa6.83□□□□□ -1.32
CPNE3-213ENST00000622183 ZC3H7BQ9UGR2 993 aaKnown RBP6.83□□□□□ -1.32
CPNE3-213ENST00000622183 ZNF281Q9Y2X9 895 aa6.83□□□□□ -1.32
CPNE3-213ENST00000622183 PCDHA8Q9Y5H6 950 aa6.83□□□□□ -1.32
CPNE3-213ENST00000622183 ALG1L2C9J202 215 aa6.82□□□□□ -1.32
CPNE3-213ENST00000622183 MSCO60682 206 aa6.82□□□□□ -1.32
CPNE3-213ENST00000622183 KPNA6O60684 536 aa6.82□□□□□ -1.32
CPNE3-213ENST00000622183 EYA4O95677 639 aa6.82□□□□□ -1.32
CPNE3-213ENST00000622183 PDGFRBP09619 1106 aa6.82□□□□□ -1.32
CPNE3-213ENST00000622183 LCP1P13796 627 aa6.82□□□□□ -1.32
CPNE3-213ENST00000622183 KCNA6P17658 529 aa6.82□□□□□ -1.32
CPNE3-213ENST00000622183 PMLP29590 882 aa6.82□□□□□ -1.32
CPNE3-213ENST00000622183 EGR3Q06889 387 aa6.82□□□□□ -1.32
CPNE3-213ENST00000622183 PAK1Q13153 545 aa6.82□□□□□ -1.32
CPNE3-213ENST00000622183 KIZQ2M2Z5 673 aa6.82□□□□□ -1.32
CPNE3-213ENST00000622183 CDCA2Q69YH5 1023 aaPredicted RBP6.82□□□□□ -1.32
CPNE3-213ENST00000622183 WWC2Q6AWC2 1192 aa6.82□□□□□ -1.32
CPNE3-213ENST00000622183 ABHD17CQ6PCB6 329 aa6.82□□□□□ -1.32
CPNE3-213ENST00000622183 STRA8Q7Z7C7 330 aa6.82□□□□□ -1.32
CPNE3-213ENST00000622183 DDX53Q86TM3 631 aaKnown RBP6.82□□□□□ -1.32
CPNE3-213ENST00000622183 FERMT3Q86UX7 667 aa6.82□□□□□ -1.32
CPNE3-213ENST00000622183 RCBTB1Q8NDN9 531 aa6.82□□□□□ -1.32
CPNE3-213ENST00000622183 WNT9AO14904 365 aa6.81□□□□□ -1.32
CPNE3-213ENST00000622183 TBC1D8O95759 1140 aa6.81□□□□□ -1.32
CPNE3-213ENST00000622183 PROCP04070 461 aa6.81□□□□□ -1.32
CPNE3-213ENST00000622183 SEPT7Q16181 437 aaKnown RBP6.81□□□□□ -1.32
CPNE3-213ENST00000622183 INF2Q27J81 1249 aa6.81□□□□□ -1.32
CPNE3-213ENST00000622183 MBLAC2Q68D91 279 aa6.81□□□□□ -1.32
CPNE3-213ENST00000622183 KIF18BQ86Y91 864 aa6.81□□□□□ -1.32
CPNE3-213ENST00000622183 NAT16Q8N8M0 369 aa6.81□□□□□ -1.32
CPNE3-213ENST00000622183 ATL2Q8NHH9 583 aa6.81□□□□□ -1.32
CPNE3-213ENST00000622183 PCDH19Q8TAB3 1148 aa6.81□□□□□ -1.32
CPNE3-213ENST00000622183 ASB11Q8WXH4 323 aa6.81□□□□□ -1.32
CPNE3-213ENST00000622183 HRASLS5Q96KN8 279 aa6.81□□□□□ -1.32
CPNE3-213ENST00000622183 ERVK13-1Q9NX77 482 aa6.81□□□□□ -1.32
CPNE3-213ENST00000622183 KLHL42Q9P2K6 505 aa6.81□□□□□ -1.32
CPNE3-213ENST00000622183 DYRK3O43781 588 aa6.8□□□□□ -1.32
CPNE3-213ENST00000622183 MYO1BO43795 1136 aa6.8□□□□□ -1.32
CPNE3-213ENST00000622183 RPL10P27635 214 aaKnown RBP6.8□□□□□ -1.32
CPNE3-213ENST00000622183 RBM10P98175 930 aaKnown RBP6.8□□□□□ -1.32
CPNE3-213ENST00000622183 PRKCQQ04759 706 aa6.8□□□□□ -1.32
CPNE3-213ENST00000622183 STRN3Q13033 797 aa6.8□□□□□ -1.32
CPNE3-213ENST00000622183 PIK3R6Q5UE93 754 aa6.8□□□□□ -1.32
CPNE3-213ENST00000622183 ZPBP2Q6X784 338 aa6.8□□□□□ -1.32
CPNE3-213ENST00000622183 WAPLQ7Z5K2 1190 aa6.8□□□□□ -1.32
CPNE3-213ENST00000622183 ZC3H7AQ8IWR0 971 aaKnown RBP6.8□□□□□ -1.32
CPNE3-213ENST00000622183 WNK4Q96J92 1243 aa6.8□□□□□ -1.32
CPNE3-213ENST00000622183 FCRL2Q96LA5 508 aaPredicted RBP6.8□□□□□ -1.32
CPNE3-213ENST00000622183 CELF4Q9BZC1 486 aaKnown RBP6.8□□□□□ -1.32
CPNE3-213ENST00000622183 SAMD15Q9P1V8 674 aa6.8□□□□□ -1.32
CPNE3-213ENST00000622183 VAV3Q9UKW4 847 aa6.8□□□□□ -1.32
CPNE3-213ENST00000622183 PCDHA2Q9Y5H9 948 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms