RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 KCNK18Q7Z418 384 aa11.89□□□□□ -0.51
VPS11-208ENST00000621676 MAN1B1Q9UKM7 699 aa11.89□□□□□ -0.51
VPS11-208ENST00000621676 KIAA1024Q9UPX6 916 aa11.89□□□□□ -0.51
VPS11-208ENST00000621676 NFE2L3Q9Y4A8 694 aa11.89□□□□□ -0.51
VPS11-208ENST00000621676 RIPK3Q9Y572 518 aa11.89□□□□□ -0.51
VPS11-208ENST00000621676 ABCB11O95342 1321 aa11.89□□□□□ -0.51
VPS11-208ENST00000621676 POTEB3A0JP26 581 aa11.89□□□□□ -0.51
VPS11-208ENST00000621676 POTECB2RU33 542 aa11.89□□□□□ -0.51
VPS11-208ENST00000621676 MRPL12P52815 198 aaKnown RBP11.89□□□□□ -0.51
VPS11-208ENST00000621676 CTTNQ14247 550 aaKnown RBP11.89□□□□□ -0.51
VPS11-208ENST00000621676 ASPRV1Q53RT3 343 aa11.89□□□□□ -0.51
VPS11-208ENST00000621676 POTEBQ6S5H4 581 aa11.89□□□□□ -0.51
VPS11-208ENST00000621676 CABP7Q86V35 215 aa11.89□□□□□ -0.51
VPS11-208ENST00000621676 KSR1Q8IVT5 923 aa11.89□□□□□ -0.51
VPS11-208ENST00000621676 PAGE5Q96GU1 130 aa11.89□□□□□ -0.51
VPS11-208ENST00000621676 PCDHA12Q9UN75 941 aa11.89□□□□□ -0.51
VPS11-208ENST00000621676 CNTNAP1P78357 1384 aa11.89□□□□□ -0.51
VPS11-208ENST00000621676 POTEFA5A3E0 1075 aa11.89□□□□□ -0.51
VPS11-208ENST00000621676 CD44P16070 742 aaKnown RBP11.89□□□□□ -0.51
VPS11-208ENST00000621676 POTEGQ6S5H5 508 aa11.89□□□□□ -0.51
VPS11-208ENST00000621676 POTEEQ6S8J3 1075 aa11.89□□□□□ -0.51
VPS11-208ENST00000621676 TPH2Q8IWU9 490 aa11.89□□□□□ -0.51
VPS11-208ENST00000621676 MTRQ99707 1265 aa11.89□□□□□ -0.51
VPS11-208ENST00000621676 AMNQ9BXJ7 453 aa11.89□□□□□ -0.51
VPS11-208ENST00000621676 RPAP3Q9H6T3 665 aaPredicted RBP11.89□□□□□ -0.51
VPS11-208ENST00000621676 PYCARDQ9ULZ3 195 aa11.89□□□□□ -0.51
VPS11-208ENST00000621676 SUGT1Q9Y2Z0 365 aa11.89□□□□□ -0.51
VPS11-208ENST00000621676 R3HCC1Q9Y3T6 440 aaKnown RBP11.89□□□□□ -0.51
VPS11-208ENST00000621676 STK36Q9NRP7 1315 aa11.89□□□□□ -0.51
VPS11-208ENST00000621676 TXLNAP40222 546 aa11.88□□□□□ -0.51
VPS11-208ENST00000621676 NKRFO15226 690 aaKnown RBP eCLIP11.88□□□□□ -0.51
VPS11-208ENST00000621676 LETM1O95202 739 aaPredicted RBP11.88□□□□□ -0.51
VPS11-208ENST00000621676 OR52Z1P0C646 297 aa11.88□□□□□ -0.51
VPS11-208ENST00000621676 LDHDQ86WU2 507 aa11.88□□□□□ -0.51
VPS11-208ENST00000621676 PCMTD1Q96MG8 357 aaPredicted RBP11.88□□□□□ -0.51
VPS11-208ENST00000621676 ANO3Q9BYT9 981 aa11.88□□□□□ -0.51
VPS11-208ENST00000621676 USP20Q9Y2K6 914 aa11.88□□□□□ -0.51
VPS11-208ENST00000621676 LMNB1P20700 586 aa11.88□□□□□ -0.51
VPS11-208ENST00000621676 HMGB2P26583 209 aaKnown RBP11.88□□□□□ -0.51
VPS11-208ENST00000621676 PSMC6P62333 389 aa11.88□□□□□ -0.51
VPS11-208ENST00000621676 ECM1Q16610 540 aa11.88□□□□□ -0.51
VPS11-208ENST00000621676 MUM1L1Q5H9M0 696 aa11.88□□□□□ -0.51
VPS11-208ENST00000621676 ZMYND12Q9H0C1 365 aa11.88□□□□□ -0.51
VPS11-208ENST00000621676 TELO2Q9Y4R8 837 aa11.88□□□□□ -0.51
VPS11-208ENST00000621676 FAM86B1E9PN63 330 aa11.87□□□□□ -0.51
VPS11-208ENST00000621676 ASNSP08243 561 aa11.87□□□□□ -0.51
VPS11-208ENST00000621676 FAM86B2P0C5J1 330 aa11.87□□□□□ -0.51
VPS11-208ENST00000621676 ADKP55263 362 aaKnown RBP11.87□□□□□ -0.51
VPS11-208ENST00000621676 DPYDQ12882 1025 aa11.87□□□□□ -0.51
VPS11-208ENST00000621676 GPATCH4Q5T3I0 446 aaKnown RBP11.87□□□□□ -0.51
VPS11-208ENST00000621676 DHX40Q8IX18 779 aaKnown RBP11.87□□□□□ -0.51
VPS11-208ENST00000621676 AGBL3Q8NEM8 1001 aa11.87□□□□□ -0.51
VPS11-208ENST00000621676 TNFRSF25Q93038 417 aa11.87□□□□□ -0.51
VPS11-208ENST00000621676 DCPSQ96C86 337 aaKnown RBP11.87□□□□□ -0.51
VPS11-208ENST00000621676 C16orf45Q96MC5 204 aaPredicted RBP11.87□□□□□ -0.51
VPS11-208ENST00000621676 RIOX1Q9H6W3 641 aa11.87□□□□□ -0.51
VPS11-208ENST00000621676 PPP6R2O75170 966 aa11.87□□□□□ -0.51
VPS11-208ENST00000621676 UBASH3AP57075 661 aa11.87□□□□□ -0.51
VPS11-208ENST00000621676 UTP14CQ5TAP6 766 aaKnown RBP11.87□□□□□ -0.51
VPS11-208ENST00000621676 IL31RAQ8NI17 732 aa11.87□□□□□ -0.51
VPS11-208ENST00000621676 CCDC12Q8WUD4 166 aaPredicted RBP11.87□□□□□ -0.51
VPS11-208ENST00000621676 SPZ1Q9BXG8 430 aa11.87□□□□□ -0.51
VPS11-208ENST00000621676 ENTPD3O75355 529 aa11.86□□□□□ -0.51
VPS11-208ENST00000621676 CDR1P51861 262 aa11.86□□□□□ -0.51
VPS11-208ENST00000621676 TICAM2Q86XR7 235 aa11.86□□□□□ -0.51
VPS11-208ENST00000621676 IQUBQ8NA54 791 aa11.86□□□□□ -0.51
VPS11-208ENST00000621676 RDH13Q8NBN7 331 aa11.86□□□□□ -0.51
VPS11-208ENST00000621676 GPRC5DQ9NZD1 345 aa11.86□□□□□ -0.51
VPS11-208ENST00000621676 A0A1W2PQ27 194 aa11.86□□□□□ -0.51
VPS11-208ENST00000621676 A0A1W2PQ64 194 aa11.86□□□□□ -0.51
VPS11-208ENST00000621676 A0A1W2PQD8 194 aa11.86□□□□□ -0.51
VPS11-208ENST00000621676 ARHGAP4P98171 946 aa11.86□□□□□ -0.51
VPS11-208ENST00000621676 ATP2C1P98194 919 aaPredicted RBP11.86□□□□□ -0.51
VPS11-208ENST00000621676 PDE4DQ08499 809 aa11.86□□□□□ -0.51
VPS11-208ENST00000621676 PPP2R5BQ15173 497 aa11.86□□□□□ -0.51
VPS11-208ENST00000621676 TATDN1Q6P1N9 297 aa11.86□□□□□ -0.51
VPS11-208ENST00000621676 ELMO3Q96BJ8 720 aa11.86□□□□□ -0.51
VPS11-208ENST00000621676 SGIP1Q9BQI5 828 aa11.86□□□□□ -0.51
VPS11-208ENST00000621676 CD2APQ9Y5K6 639 aa11.86□□□□□ -0.51
VPS11-208ENST00000621676 COL11A2P13942 1736 aaPredicted RBP11.86□□□□□ -0.51
VPS11-208ENST00000621676 MYCP01106 439 aaPredicted RBP11.86□□□□□ -0.51
VPS11-208ENST00000621676 GOPCQ9HD26 462 aa11.86□□□□□ -0.51
VPS11-208ENST00000621676 TAB2Q9NYJ8 693 aa11.86□□□□□ -0.51
VPS11-208ENST00000621676 ACTN4O43707 911 aaKnown RBP11.85□□□□□ -0.51
VPS11-208ENST00000621676 VCAM1P19320 739 aa11.85□□□□□ -0.51
VPS11-208ENST00000621676 IQCB1Q15051 598 aa11.85□□□□□ -0.51
VPS11-208ENST00000621676 DPY19L2Q6NUT2 758 aa11.85□□□□□ -0.51
VPS11-208ENST00000621676 BANK1Q8NDB2 785 aa11.85□□□□□ -0.51
VPS11-208ENST00000621676 VCPKMTQ9H867 229 aa11.85□□□□□ -0.51
VPS11-208ENST00000621676 TCEAL9Q9UHQ7 104 aa11.85□□□□□ -0.51
VPS11-208ENST00000621676 HTTP42858 3142 aa11.85□□□□□ -0.51
VPS11-208ENST00000621676 MEIS2O14770 477 aa11.85□□□□□ -0.51
VPS11-208ENST00000621676 TEX33O43247 280 aa11.85□□□□□ -0.51
VPS11-208ENST00000621676 KRT25Q7Z3Z0 450 aa11.85□□□□□ -0.51
VPS11-208ENST00000621676 TEPSINQ96N21 525 aa11.85□□□□□ -0.51
VPS11-208ENST00000621676 PPP1R16BQ96T49 567 aa11.85□□□□□ -0.51
VPS11-208ENST00000621676 NAT10Q9H0A0 1025 aaKnown RBP11.85□□□□□ -0.51
VPS11-208ENST00000621676 NYAP2Q9P242 653 aa11.85□□□□□ -0.51
VPS11-208ENST00000621676 IRF6O14896 467 aa11.85□□□□□ -0.51
VPS11-208ENST00000621676 ARP10275 920 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms