RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 PHKBQ93100 1093 aa16.56■□□□□ 0.24
CBWD3-217ENST00000621474 SEC63Q9UGP8 760 aaKnown RBP16.56■□□□□ 0.24
CBWD3-217ENST00000621474 MRPL11Q9Y3B7 192 aaKnown RBP16.56■□□□□ 0.24
CBWD3-217ENST00000621474 DDX49Q9Y6V7 483 aaKnown RBP16.56■□□□□ 0.24
CBWD3-217ENST00000621474 PTPDC1A2A3K4 754 aa16.55■□□□□ 0.24
CBWD3-217ENST00000621474 POTEB2H3BUK9 544 aa16.55■□□□□ 0.24
CBWD3-217ENST00000621474 CD2BP2O95400 341 aaKnown RBP16.55■□□□□ 0.24
CBWD3-217ENST00000621474 PRKAR2AP13861 404 aaKnown RBP16.55■□□□□ 0.24
CBWD3-217ENST00000621474 HSD17B4P51659 736 aa16.55■□□□□ 0.24
CBWD3-217ENST00000621474 RABEP1Q15276 862 aa16.55■□□□□ 0.24
CBWD3-217ENST00000621474 WWC2Q6AWC2 1192 aa16.55■□□□□ 0.24
CBWD3-217ENST00000621474 MAMDC4Q6UXC1 1216 aa16.55■□□□□ 0.24
CBWD3-217ENST00000621474 ZNF467Q7Z7K2 595 aaPredicted RBP16.55■□□□□ 0.24
CBWD3-217ENST00000621474 GPKOWQ92917 476 aaPredicted RBP eCLIP16.55■□□□□ 0.24
CBWD3-217ENST00000621474 SLC5A4Q9NY91 659 aa16.55■□□□□ 0.24
CBWD3-217ENST00000621474 DTNBO60941 627 aa16.54■□□□□ 0.24
CBWD3-217ENST00000621474 CTDNEP1O95476 244 aa16.54■□□□□ 0.24
CBWD3-217ENST00000621474 MYCP01106 439 aaPredicted RBP16.54■□□□□ 0.24
CBWD3-217ENST00000621474 TRPV1Q8NER1 839 aa16.54■□□□□ 0.24
CBWD3-217ENST00000621474 SYTL5Q8TDW5 730 aaPredicted RBP16.54■□□□□ 0.24
CBWD3-217ENST00000621474 SHISA4Q96DD7 197 aa16.54■□□□□ 0.24
CBWD3-217ENST00000621474 TINF2Q9BSI4 451 aa16.54■□□□□ 0.24
CBWD3-217ENST00000621474 MAF1Q9H063 256 aa16.54■□□□□ 0.24
CBWD3-217ENST00000621474 UNC93B1Q9H1C4 597 aa16.54■□□□□ 0.24
CBWD3-217ENST00000621474 PRPF3O43395 683 aaKnown RBP16.53■□□□□ 0.24
CBWD3-217ENST00000621474 SNAI1O95863 264 aaPredicted RBP16.53■□□□□ 0.24
CBWD3-217ENST00000621474 CYBAP13498 195 aa16.53■□□□□ 0.24
CBWD3-217ENST00000621474 CALML3P27482 149 aa16.53■□□□□ 0.24
CBWD3-217ENST00000621474 PFKFB3Q16875 520 aaPredicted RBP16.53■□□□□ 0.24
CBWD3-217ENST00000621474 NECAB1Q8N987 351 aa16.53■□□□□ 0.24
CBWD3-217ENST00000621474 GTF3C6Q969F1 213 aa16.53■□□□□ 0.24
CBWD3-217ENST00000621474 RNF26Q9BY78 433 aaPredicted RBP16.53■□□□□ 0.24
CBWD3-217ENST00000621474 SLKQ9H2G2 1235 aaPredicted RBP16.53■□□□□ 0.24
CBWD3-217ENST00000621474 PAK6Q9NQU5 681 aaPredicted RBP16.53■□□□□ 0.24
CBWD3-217ENST00000621474 BIN2Q9UBW5 565 aaPredicted RBP16.53■□□□□ 0.24
CBWD3-217ENST00000621474 SYNGAP1Q96PV0 1343 aa16.53■□□□□ 0.24
CBWD3-217ENST00000621474 CFBP00751 764 aa16.52■□□□□ 0.24
CBWD3-217ENST00000621474 CCL5P13501 91 aa16.52■□□□□ 0.24
CBWD3-217ENST00000621474 CCND3P30281 292 aaPredicted RBP16.52■□□□□ 0.24
CBWD3-217ENST00000621474 UBXN2AP68543 259 aa16.52■□□□□ 0.24
CBWD3-217ENST00000621474 PRAMEF19Q5SWL8 479 aa16.52■□□□□ 0.24
CBWD3-217ENST00000621474 HEATR3Q7Z4Q2 680 aa16.52■□□□□ 0.24
CBWD3-217ENST00000621474 MCF2L2Q86YR7 1114 aa16.52■□□□□ 0.24
CBWD3-217ENST00000621474 MSL3Q8N5Y2 521 aaKnown RBP16.52■□□□□ 0.24
CBWD3-217ENST00000621474 KATNBL1Q9H079 304 aa16.52■□□□□ 0.24
CBWD3-217ENST00000621474 RPTORQ8N122 1335 aa16.52■□□□□ 0.24
CBWD3-217ENST00000621474 STXBP3O00186 592 aa16.52■□□□□ 0.23
CBWD3-217ENST00000621474 MEIS2O14770 477 aa16.52■□□□□ 0.23
CBWD3-217ENST00000621474 HOXA13P31271 388 aaPredicted RBP16.52■□□□□ 0.23
CBWD3-217ENST00000621474 ALDH5A1P51649 535 aaPredicted RBP16.52■□□□□ 0.23
CBWD3-217ENST00000621474 TRAF1Q13077 416 aa16.52■□□□□ 0.23
CBWD3-217ENST00000621474 MFSD14CQ5VZR4 134 aa16.52■□□□□ 0.23
CBWD3-217ENST00000621474 ARMCX2Q7L311 632 aa16.52■□□□□ 0.23
CBWD3-217ENST00000621474 MORC4Q8TE76 937 aa16.52■□□□□ 0.23
CBWD3-217ENST00000621474 SLC26A6Q9BXS9 759 aa16.52■□□□□ 0.23
CBWD3-217ENST00000621474 BARHL2Q9NY43 387 aa16.52■□□□□ 0.23
CBWD3-217ENST00000621474 LIMCH1Q9UPQ0 1083 aa16.52■□□□□ 0.23
CBWD3-217ENST00000621474 KIAA1217Q5T5P2 1943 aa16.51■□□□□ 0.23
CBWD3-217ENST00000621474 SCG2P13521 617 aa16.51■□□□□ 0.23
CBWD3-217ENST00000621474 DNERQ8NFT8 737 aa16.51■□□□□ 0.23
CBWD3-217ENST00000621474 TAAR1Q96RJ0 339 aa16.51■□□□□ 0.23
CBWD3-217ENST00000621474 POTEFA5A3E0 1075 aa16.5■□□□□ 0.23
CBWD3-217ENST00000621474 PIK3CDO00329 1044 aa16.5■□□□□ 0.23
CBWD3-217ENST00000621474 ZNF865P0CJ78 1059 aaPredicted RBP16.5■□□□□ 0.23
CBWD3-217ENST00000621474 EDNRBP24530 442 aa16.5■□□□□ 0.23
CBWD3-217ENST00000621474 USP17L6PQ6QN14 398 aa16.5■□□□□ 0.23
CBWD3-217ENST00000621474 SAMD3Q8N6K7 520 aa16.5■□□□□ 0.23
CBWD3-217ENST00000621474 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.5■□□□□ 0.23
CBWD3-217ENST00000621474 RNF208Q9H0X6 261 aa16.5■□□□□ 0.23
CBWD3-217ENST00000621474 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.5■□□□□ 0.23
CBWD3-217ENST00000621474 MAP3K20Q9NYL2 800 aaKnown RBP16.5■□□□□ 0.23
CBWD3-217ENST00000621474 CCDC85CA6NKD9 419 aa16.49■□□□□ 0.23
CBWD3-217ENST00000621474 hCG_1984214I3L0E3 225 aa16.49■□□□□ 0.23
CBWD3-217ENST00000621474 CPLX1O14810 134 aa16.49■□□□□ 0.23
CBWD3-217ENST00000621474 ADAMTS3O15072 1205 aa16.49■□□□□ 0.23
CBWD3-217ENST00000621474 ZNF713Q8N859 430 aaPredicted RBP16.49■□□□□ 0.23
CBWD3-217ENST00000621474 AIFM3Q96NN9 605 aa16.49■□□□□ 0.23
CBWD3-217ENST00000621474 HMX1Q9NP08 348 aaPredicted RBP16.49■□□□□ 0.23
CBWD3-217ENST00000621474 RBM27Q9P2N5 1060 aaKnown RBP16.49■□□□□ 0.23
CBWD3-217ENST00000621474 ADD3Q9UEY8 706 aaKnown RBP16.49■□□□□ 0.23
CBWD3-217ENST00000621474 GCOM1H8Y6P7 765 aaPredicted RBP16.48■□□□□ 0.23
CBWD3-217ENST00000621474 POLR2MP0CAP2 368 aa16.48■□□□□ 0.23
CBWD3-217ENST00000621474 FDPSP14324 419 aaKnown RBP16.48■□□□□ 0.23
CBWD3-217ENST00000621474 NAPAP54920 295 aa16.48■□□□□ 0.23
CBWD3-217ENST00000621474 SSRP1Q08945 709 aaKnown RBP16.48■□□□□ 0.23
CBWD3-217ENST00000621474 LHX8Q68G74 356 aa16.48■□□□□ 0.23
CBWD3-217ENST00000621474 PPP1R18Q6NYC8 613 aa16.48■□□□□ 0.23
CBWD3-217ENST00000621474 NSUN7Q8NE18 718 aaKnown RBP16.48■□□□□ 0.23
CBWD3-217ENST00000621474 PXMP2Q9NR77 195 aa16.48■□□□□ 0.23
CBWD3-217ENST00000621474 FRMPD4Q14CM0 1322 aa16.48■□□□□ 0.23
CBWD3-217ENST00000621474 STK36Q9NRP7 1315 aa16.48■□□□□ 0.23
CBWD3-217ENST00000621474 LOC102724159A0A0B4J2E5 919 aa16.48■□□□□ 0.23
CBWD3-217ENST00000621474 ASB14A6NK59 587 aa16.48■□□□□ 0.23
CBWD3-217ENST00000621474 ADCY6O43306 1168 aa16.48■□□□□ 0.23
CBWD3-217ENST00000621474 GJB1P08034 283 aa16.48■□□□□ 0.23
CBWD3-217ENST00000621474 PWP2Q15269 919 aaKnown RBP16.48■□□□□ 0.23
CBWD3-217ENST00000621474 UBE2SQ16763 222 aa16.48■□□□□ 0.23
CBWD3-217ENST00000621474 RMDN3Q96TC7 470 aa16.48■□□□□ 0.23
CBWD3-217ENST00000621474 PSTPIP2Q9H939 334 aa16.48■□□□□ 0.23
CBWD3-217ENST00000621474 NRBP1Q9UHY1 535 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms