RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 PTGDRQ13258 359 aa9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 R3HDM1Q15032 1099 aaKnown RBP9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 BRDTQ58F21 947 aaPredicted RBP9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 SPATA1Q5VX52 437 aa9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 ZNF34Q8IZ26 560 aa9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 GOLGA1Q92805 767 aa9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 ADAMTSL3P82987 1691 aa9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 ERVV-1B6SEH8 477 aa9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 BMP15O95972 392 aa9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 CD44P16070 742 aaKnown RBP9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 NONOQ15233 471 aaKnown RBP eCLIP9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 GRIPAP1Q4V328 841 aa9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 IQCEQ6IPM2 695 aa9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 GSTA5Q7RTV2 222 aa9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 SESTD1Q86VW0 696 aa9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 ALS2CR12Q96Q35 445 aa9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 DNAI2Q9GZS0 605 aa9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 ZCCHC17Q9NP64 241 aaKnown RBP9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 TRPC6Q9Y210 931 aa9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 ERCC5P28715 1186 aaPredicted RBP9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 TECP42680 631 aa9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 ADCY7P51828 1080 aa9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 ZNF579Q8NAF0 562 aaKnown RBP9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 RNF34Q969K3 372 aa9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 MED15Q96RN5 788 aa9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 NLRC4Q9NPP4 1024 aa9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 MYH7P12883 1935 aa9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 A0A0U1RQJ8 604 aa9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 PPEF1O14829 653 aaPredicted RBP9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 NMT2O60551 498 aa9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 EIF3JO75822 258 aaKnown RBP9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 PLA2G4AP47712 749 aa9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 SARSP49591 514 aaKnown RBP9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 TBX2Q13207 712 aaPredicted RBP9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 NR1I3Q14994 352 aa9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 NLRX1Q86UT6 975 aa9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 ATRIPQ8WXE1 791 aa9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 CCDC127Q96BQ5 260 aa9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 PARD6BQ9BYG5 372 aa9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 TAB2Q9NYJ8 693 aa9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 PCDHA1Q9Y5I3 950 aa9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 AKAP11Q9UKA4 1901 aa9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 WNT7AO00755 349 aa9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 KIAA0754O94854 1291 aa9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 SLFN13Q68D06 897 aa9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 NEK11Q8NG66 645 aa9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 HINFPQ9BQA5 517 aa9.17□□□□□ -0.94
PTPDC1-204ENST00000620992 PNPLA7Q6ZV29 1317 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 EXOC3O60645 756 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 GCNT3O95395 438 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 CHRNA5P30532 468 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 RASA3Q14644 834 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 ARHGAP44Q17R89 818 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 PRAMEF18Q5VWM3 479 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 RAD9BQ6WBX8 426 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 DPP9Q86TI2 863 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 GPR161Q8N6U8 529 aaKnown RBP9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 ACRBPQ8NEB7 543 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 SUPT20HQ8NEM7 779 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 FLAD1Q8NFF5 587 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 CTAGE1Q96RT6 745 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 LRRC27Q9C0I9 530 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 NACA2Q9H009 215 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 ZNF277Q9NRM2 450 aaPredicted RBP9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 MRFAP1Q9Y605 127 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 PARP4Q9UKK3 1724 aaKnown RBP9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 A0A1B0GTH6 734 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 GAS7O60861 476 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 RHOXF2BP0C7M4 288 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 OAS2P29728 719 aaKnown RBP9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 CACNB1Q02641 598 aaPredicted RBP9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 MAP2K1Q02750 393 aaPredicted RBP9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 USP17L2Q6R6M4 530 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 DEFB132Q7Z7B7 95 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 USP37Q86T82 979 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 CSGALNACT2Q8N6G5 542 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 RHOXF2Q9BQY4 288 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 ATP6V0A2Q9Y487 856 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 HSPA1LP34931 641 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 CYP2J2P51589 502 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 TNFAIP1Q13829 316 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 ZRSR2Q15696 482 aaKnown RBP9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 CALCRLQ16602 461 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 CCDC65Q8IXS2 484 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 PSTPIP2Q9H939 334 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 USTQ9Y2C2 406 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 C4AP0C0L4 1744 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 C4BP0C0L5 1744 aa9.16□□□□□ -0.94
PTPDC1-204ENST00000620992 ATP2B4P23634 1241 aa9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 PRDX5P30044 214 aa9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 ABCB5Q2M3G0 1257 aa9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 NT5DC1Q5TFE4 455 aa9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 CC2D1AQ6P1N0 951 aaPredicted RBP9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 NOC4LQ9BVI4 516 aaKnown RBP9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 TRIM31Q9BZY9 425 aa9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 TDRD3Q9H7E2 651 aaKnown RBP9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 LUC7L2Q9Y383 392 aaKnown RBP9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 HGSO14964 777 aaPredicted RBP9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 GYS2P54840 703 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms