RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 A0A0U1RQG5 324 aaPredicted RBP18.77■□□□□ 0.6
CD40-207ENST00000620709 KIAA0355O15063 1070 aa18.77■□□□□ 0.6
CD40-207ENST00000620709 SMPD1P17405 629 aa18.77■□□□□ 0.6
CD40-207ENST00000620709 USH1GQ495M9 461 aa18.77■□□□□ 0.6
CD40-207ENST00000620709 ANKRD33Q7Z3H0 272 aa18.77■□□□□ 0.6
CD40-207ENST00000620709 MAP4K1Q92918 833 aa18.77■□□□□ 0.6
CD40-207ENST00000620709 IL17RAQ96F46 866 aa18.77■□□□□ 0.6
CD40-207ENST00000620709 MTMR10Q9NXD2 777 aa18.77■□□□□ 0.6
CD40-207ENST00000620709 CTNNA3Q9UI47 895 aa18.77■□□□□ 0.6
CD40-207ENST00000620709 ELP1O95163 1332 aa18.77■□□□□ 0.6
CD40-207ENST00000620709 LAMA4Q16363 1823 aa18.77■□□□□ 0.59
CD40-207ENST00000620709 ALDH5A1P51649 535 aaPredicted RBP18.76■□□□□ 0.59
CD40-207ENST00000620709 FPGSQ05932 587 aa18.76■□□□□ 0.59
CD40-207ENST00000620709 CCDC178Q5BJE1 867 aa18.76■□□□□ 0.59
CD40-207ENST00000620709 MROH7Q68CQ1 1323 aa18.76■□□□□ 0.59
CD40-207ENST00000620709 CXCL17Q6UXB2 119 aa18.76■□□□□ 0.59
CD40-207ENST00000620709 SLC30A10Q6XR72 485 aa18.76■□□□□ 0.59
CD40-207ENST00000620709 RNF207Q6ZRF8 634 aa18.76■□□□□ 0.59
CD40-207ENST00000620709 PNMA1Q8ND90 353 aa18.76■□□□□ 0.59
CD40-207ENST00000620709 TOX2Q96NM4 488 aa18.76■□□□□ 0.59
CD40-207ENST00000620709 DSCC1Q9BVC3 393 aa18.76■□□□□ 0.59
CD40-207ENST00000620709 ARVCFO00192 962 aa18.75■□□□□ 0.59
CD40-207ENST00000620709 DHX16O60231 1041 aaKnown RBP18.75■□□□□ 0.59
CD40-207ENST00000620709 EPHB4P54760 987 aa18.75■□□□□ 0.59
CD40-207ENST00000620709 FSCN1Q16658 493 aaKnown RBP18.75■□□□□ 0.59
CD40-207ENST00000620709 TMEM63BQ5T3F8 832 aa18.75■□□□□ 0.59
CD40-207ENST00000620709 IQSEC1Q6DN90 963 aa18.75■□□□□ 0.59
CD40-207ENST00000620709 TAPT1Q6NXT6 567 aa18.75■□□□□ 0.59
CD40-207ENST00000620709 DGKHQ86XP1 1220 aa18.75■□□□□ 0.59
CD40-207ENST00000620709 SNX21Q969T3 373 aa18.75■□□□□ 0.59
CD40-207ENST00000620709 RNPC3Q96LT9 517 aaKnown RBP18.75■□□□□ 0.59
CD40-207ENST00000620709 ZSCAN10Q96SZ4 725 aaPredicted RBP18.75■□□□□ 0.59
CD40-207ENST00000620709 VTA1Q9NP79 307 aa18.75■□□□□ 0.59
CD40-207ENST00000620709 RBM8AQ9Y5S9 174 aaKnown RBP18.75■□□□□ 0.59
CD40-207ENST00000620709 LCTP09848 1927 aa18.75■□□□□ 0.59
CD40-207ENST00000620709 LRRC37A2A6NM11 1700 aa18.75■□□□□ 0.59
CD40-207ENST00000620709 CTAGE5O15320 804 aa18.74■□□□□ 0.59
CD40-207ENST00000620709 TLR3O15455 904 aaKnown RBP18.74■□□□□ 0.59
CD40-207ENST00000620709 ZEB2O60315 1214 aa18.74■□□□□ 0.59
CD40-207ENST00000620709 GPATCH4Q5T3I0 446 aaKnown RBP18.74■□□□□ 0.59
CD40-207ENST00000620709 ZNF697Q5TEC3 545 aa18.74■□□□□ 0.59
CD40-207ENST00000620709 HSCBQ8IWL3 235 aa18.74■□□□□ 0.59
CD40-207ENST00000620709 CLEC4DQ8WXI8 215 aa18.74■□□□□ 0.59
CD40-207ENST00000620709 PPP1R12CQ9BZL4 782 aa18.74■□□□□ 0.59
CD40-207ENST00000620709 ZSWIM5Q9P217 1185 aa18.74■□□□□ 0.59
CD40-207ENST00000620709 GNEQ9Y223 722 aaKnown RBP18.74■□□□□ 0.59
CD40-207ENST00000620709 TIMP1P01033 207 aa18.74■□□□□ 0.59
CD40-207ENST00000620709 SNHG28P0DPA3 235 aa18.74■□□□□ 0.59
CD40-207ENST00000620709 CDK7P50613 346 aa18.74■□□□□ 0.59
CD40-207ENST00000620709 PDE4DQ08499 809 aa18.74■□□□□ 0.59
CD40-207ENST00000620709 UBAC1Q9BSL1 405 aa18.74■□□□□ 0.59
CD40-207ENST00000620709 KRT23Q9C075 422 aa18.74■□□□□ 0.59
CD40-207ENST00000620709 VAT1LQ9HCJ6 419 aa18.74■□□□□ 0.59
CD40-207ENST00000620709 PNMA2Q9UL42 364 aa18.74■□□□□ 0.59
CD40-207ENST00000620709 TNKSO95271 1327 aa18.73■□□□□ 0.59
CD40-207ENST00000620709 RPS6P62753 249 aaKnown RBP18.73■□□□□ 0.59
CD40-207ENST00000620709 NECTIN1Q15223 517 aa18.73■□□□□ 0.59
CD40-207ENST00000620709 RNF20Q5VTR2 975 aa18.73■□□□□ 0.59
CD40-207ENST00000620709 ENAHQ8N8S7 591 aaPredicted RBP18.73■□□□□ 0.59
CD40-207ENST00000620709 IL27Q8NEV9 243 aa18.73■□□□□ 0.59
CD40-207ENST00000620709 MPHOSPH6Q99547 160 aaKnown RBP18.73■□□□□ 0.59
CD40-207ENST00000620709 WDR11Q9BZH6 1224 aa18.73■□□□□ 0.59
CD40-207ENST00000620709 STXBP5LQ9Y2K9 1186 aa18.73■□□□□ 0.59
CD40-207ENST00000620709 U3KPZ7 1027 aaPredicted RBP18.73■□□□□ 0.59
CD40-207ENST00000620709 WDR19Q8NEZ3 1342 aa18.72■□□□□ 0.59
CD40-207ENST00000620709 PSMC6P62333 389 aa18.72■□□□□ 0.59
CD40-207ENST00000620709 CDC37Q16543 378 aaPredicted RBP18.72■□□□□ 0.59
CD40-207ENST00000620709 KCNB2Q92953 911 aa18.72■□□□□ 0.59
CD40-207ENST00000620709 CNNM2Q9H8M5 875 aa18.72■□□□□ 0.59
CD40-207ENST00000620709 TBX21Q9UL17 535 aa18.72■□□□□ 0.59
CD40-207ENST00000620709 SNX14Q9Y5W7 946 aa18.72■□□□□ 0.59
CD40-207ENST00000620709 ST18O60284 1047 aa18.71■□□□□ 0.59
CD40-207ENST00000620709 CABYRO75952 493 aa18.71■□□□□ 0.59
CD40-207ENST00000620709 PARP1P09874 1014 aaKnown RBP18.71■□□□□ 0.59
CD40-207ENST00000620709 ITGA7Q13683 1181 aa18.71■□□□□ 0.59
CD40-207ENST00000620709 IFIT1BQ5T764 474 aaKnown RBP18.71■□□□□ 0.59
CD40-207ENST00000620709 CREB3L3Q68CJ9 461 aa18.71■□□□□ 0.59
CD40-207ENST00000620709 ADGRF4Q8IZF3 695 aa18.71■□□□□ 0.59
CD40-207ENST00000620709 MORC4Q8TE76 937 aa18.71■□□□□ 0.59
CD40-207ENST00000620709 MYL3P08590 195 aa18.7■□□□□ 0.58
CD40-207ENST00000620709 NT5C2P49902 561 aa18.7■□□□□ 0.58
CD40-207ENST00000620709 NKX3-2P78367 333 aa18.7■□□□□ 0.58
CD40-207ENST00000620709 ASPRV1Q53RT3 343 aa18.7■□□□□ 0.58
CD40-207ENST00000620709 FAM109BQ6ICB4 259 aaPredicted RBP18.7■□□□□ 0.58
CD40-207ENST00000620709 MFSD5Q6N075 450 aa18.7■□□□□ 0.58
CD40-207ENST00000620709 FAM126BQ8IXS8 530 aa18.7■□□□□ 0.58
CD40-207ENST00000620709 OR6J1Q8NGC5 347 aa18.7■□□□□ 0.58
CD40-207ENST00000620709 GUCD1Q96NT3 240 aa18.7■□□□□ 0.58
CD40-207ENST00000620709 SLC27A2O14975 620 aa18.69■□□□□ 0.58
CD40-207ENST00000620709 CYP2C18P33260 490 aa18.69■□□□□ 0.58
CD40-207ENST00000620709 SMAD3P84022 425 aaKnown RBP18.69■□□□□ 0.58
CD40-207ENST00000620709 TRDNQ13061 729 aa18.69■□□□□ 0.58
CD40-207ENST00000620709 DUSP28Q4G0W2 176 aa18.69■□□□□ 0.58
CD40-207ENST00000620709 RASEFQ8IZ41 740 aa18.69■□□□□ 0.58
CD40-207ENST00000620709 TMEM199Q8N511 208 aa18.69■□□□□ 0.58
CD40-207ENST00000620709 ANKS1AQ92625 1134 aa18.69■□□□□ 0.58
CD40-207ENST00000620709 Q9Y3F1 56 aa18.69■□□□□ 0.58
CD40-207ENST00000620709 ACRP10323 421 aa18.69■□□□□ 0.58
CD40-207ENST00000620709 CSF2RAP15509 400 aa18.69■□□□□ 0.58
CD40-207ENST00000620709 PPIGQ13427 754 aaKnown RBP eCLIP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms