RNA–Protein interactions for RNA: ENST00000619530.1

LINC00221-202, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,499 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-202ENST00000619530 TLE2Q04725 743 aa18.23■□□□□ 0.51
LINC00221-202ENST00000619530 TMEM63BQ5T3F8 832 aa18.23■□□□□ 0.51
LINC00221-202ENST00000619530 IQSEC1Q6DN90 963 aa18.23■□□□□ 0.51
LINC00221-202ENST00000619530 TAPT1Q6NXT6 567 aa18.23■□□□□ 0.51
LINC00221-202ENST00000619530 MB21D2Q8IYB1 491 aaPredicted RBP18.23■□□□□ 0.51
LINC00221-202ENST00000619530 AP5M1Q9H0R1 490 aa18.23■□□□□ 0.51
LINC00221-202ENST00000619530 GPHNQ9NQX3 736 aaPredicted RBP18.23■□□□□ 0.51
LINC00221-202ENST00000619530 LCTP09848 1927 aa18.22■□□□□ 0.51
LINC00221-202ENST00000619530 MYH6P13533 1939 aa18.22■□□□□ 0.51
LINC00221-202ENST00000619530 PALM3A6NDB9 673 aaPredicted RBP18.22■□□□□ 0.51
LINC00221-202ENST00000619530 SMPD1P17405 629 aa18.22■□□□□ 0.51
LINC00221-202ENST00000619530 PDE4DQ08499 809 aa18.22■□□□□ 0.51
LINC00221-202ENST00000619530 GRM4Q14833 912 aa18.22■□□□□ 0.51
LINC00221-202ENST00000619530 CREB3L3Q68CJ9 461 aa18.22■□□□□ 0.51
LINC00221-202ENST00000619530 CASC1Q6TDU7 716 aa18.22■□□□□ 0.51
LINC00221-202ENST00000619530 CATIPQ7Z7H3 387 aa18.22■□□□□ 0.51
LINC00221-202ENST00000619530 IGDCC4Q8TDY8 1250 aa18.22■□□□□ 0.51
LINC00221-202ENST00000619530 NUP133Q8WUM0 1156 aa18.22■□□□□ 0.51
LINC00221-202ENST00000619530 UPF3AQ9H1J1 476 aaKnown RBP18.22■□□□□ 0.51
LINC00221-202ENST00000619530 VTA1Q9NP79 307 aa18.22■□□□□ 0.51
LINC00221-202ENST00000619530 STARD7Q9NQZ5 370 aa18.22■□□□□ 0.51
LINC00221-202ENST00000619530 MOXD2PA6NHM9 499 aa18.21■□□□□ 0.51
LINC00221-202ENST00000619530 PRC1O43663 620 aa18.21■□□□□ 0.51
LINC00221-202ENST00000619530 PQBP1O60828 265 aaKnown RBP18.21■□□□□ 0.51
LINC00221-202ENST00000619530 ASGR1P07306 291 aa18.21■□□□□ 0.51
LINC00221-202ENST00000619530 BMP8BP34820 402 aa18.21■□□□□ 0.51
LINC00221-202ENST00000619530 SNX17Q15036 470 aa18.21■□□□□ 0.51
LINC00221-202ENST00000619530 CCSAPQ6IQ19 270 aaPredicted RBP18.21■□□□□ 0.51
LINC00221-202ENST00000619530 HOMER1Q86YM7 354 aa18.21■□□□□ 0.51
LINC00221-202ENST00000619530 PCSK9Q8NBP7 692 aaKnown RBP18.21■□□□□ 0.51
LINC00221-202ENST00000619530 MORC4Q8TE76 937 aa18.21■□□□□ 0.51
LINC00221-202ENST00000619530 PIBF1Q8WXW3 757 aa18.21■□□□□ 0.51
LINC00221-202ENST00000619530 MRPL11Q9Y3B7 192 aaKnown RBP18.21■□□□□ 0.51
LINC00221-202ENST00000619530 BAZ2BQ9UIF8 2168 aaKnown RBP18.21■□□□□ 0.51
LINC00221-202ENST00000619530 CDC45O75419 566 aa18.2■□□□□ 0.5
LINC00221-202ENST00000619530 NECTIN1Q15223 517 aa18.2■□□□□ 0.5
LINC00221-202ENST00000619530 NFXL1Q6ZNB6 911 aa18.2■□□□□ 0.5
LINC00221-202ENST00000619530 SH3RF1Q7Z6J0 888 aa18.2■□□□□ 0.5
LINC00221-202ENST00000619530 TLK2Q86UE8 772 aa18.2■□□□□ 0.5
LINC00221-202ENST00000619530 MCF2L2Q86YR7 1114 aa18.2■□□□□ 0.5
LINC00221-202ENST00000619530 RGS22Q8NE09 1264 aa18.2■□□□□ 0.5
LINC00221-202ENST00000619530 TAAR1Q96RJ0 339 aa18.2■□□□□ 0.5
LINC00221-202ENST00000619530 MPHOSPH6Q99547 160 aaKnown RBP18.2■□□□□ 0.5
LINC00221-202ENST00000619530 AMNQ9BXJ7 453 aa18.2■□□□□ 0.5
LINC00221-202ENST00000619530 GNEQ9Y223 722 aaKnown RBP18.2■□□□□ 0.5
LINC00221-202ENST00000619530 RANBP2P49792 3224 aaKnown RBP18.2■□□□□ 0.5
LINC00221-202ENST00000619530 CTAGE5O15320 804 aa18.2■□□□□ 0.5
LINC00221-202ENST00000619530 CST5P28325 142 aaPredicted RBP18.2■□□□□ 0.5
LINC00221-202ENST00000619530 MCM5P33992 734 aa18.2■□□□□ 0.5
LINC00221-202ENST00000619530 SYTL5Q8TDW5 730 aaPredicted RBP18.2■□□□□ 0.5
LINC00221-202ENST00000619530 GLT1D1Q96MS3 346 aa18.2■□□□□ 0.5
LINC00221-202ENST00000619530 PIGSQ96S52 555 aa18.2■□□□□ 0.5
LINC00221-202ENST00000619530 MYL10Q9BUA6 226 aa18.2■□□□□ 0.5
LINC00221-202ENST00000619530 WDR11Q9BZH6 1224 aa18.2■□□□□ 0.5
LINC00221-202ENST00000619530 LY9Q9HBG7 655 aa18.2■□□□□ 0.5
LINC00221-202ENST00000619530 B4DLN1 442 aa18.19■□□□□ 0.5
LINC00221-202ENST00000619530 ZBTB5O15062 677 aa18.19■□□□□ 0.5
LINC00221-202ENST00000619530 PPP1R11O60927 126 aaPredicted RBP18.19■□□□□ 0.5
LINC00221-202ENST00000619530 CFBP00751 764 aa18.19■□□□□ 0.5
LINC00221-202ENST00000619530 MRPL12P52815 198 aaKnown RBP18.19■□□□□ 0.5
LINC00221-202ENST00000619530 TROAPQ12815 778 aa18.19■□□□□ 0.5
LINC00221-202ENST00000619530 COL9A3Q14050 684 aaPredicted RBP18.19■□□□□ 0.5
LINC00221-202ENST00000619530 FSCN1Q16658 493 aaKnown RBP18.19■□□□□ 0.5
LINC00221-202ENST00000619530 C1orf53Q5VUE5 145 aa18.19■□□□□ 0.5
LINC00221-202ENST00000619530 CXCL17Q6UXB2 119 aa18.19■□□□□ 0.5
LINC00221-202ENST00000619530 DNERQ8NFT8 737 aa18.19■□□□□ 0.5
LINC00221-202ENST00000619530 A0A1W2PPC1 479 aa18.18■□□□□ 0.5
LINC00221-202ENST00000619530 TRIM43BA6NCK2 446 aa18.18■□□□□ 0.5
LINC00221-202ENST00000619530 SLC35G1Q2M3R5 365 aa18.18■□□□□ 0.5
LINC00221-202ENST00000619530 BADQ92934 168 aa18.18■□□□□ 0.5
LINC00221-202ENST00000619530 TRIM43Q96BQ3 446 aaPredicted RBP18.18■□□□□ 0.5
LINC00221-202ENST00000619530 LRRC2Q9BYS8 371 aa18.18■□□□□ 0.5
LINC00221-202ENST00000619530 PDLIM7Q9NR12 457 aa18.18■□□□□ 0.5
LINC00221-202ENST00000619530 TMEM39AQ9NV64 488 aa18.18■□□□□ 0.5
LINC00221-202ENST00000619530 COL20A1Q9P218 1284 aa18.18■□□□□ 0.5
LINC00221-202ENST00000619530 PCDHA1Q9Y5I3 950 aa18.18■□□□□ 0.5
LINC00221-202ENST00000619530 LOC102724159A0A0B4J2E5 919 aa18.17■□□□□ 0.5
LINC00221-202ENST00000619530 CCDC69A6NI79 296 aa18.17■□□□□ 0.5
LINC00221-202ENST00000619530 DCDC2CA8MYV0 355 aa18.17■□□□□ 0.5
LINC00221-202ENST00000619530 SOX1O00570 391 aaPredicted RBP18.17■□□□□ 0.5
LINC00221-202ENST00000619530 ZEB2O60315 1214 aa18.17■□□□□ 0.5
LINC00221-202ENST00000619530 CLTBP09497 229 aa18.17■□□□□ 0.5
LINC00221-202ENST00000619530 PWP2Q15269 919 aaKnown RBP18.17■□□□□ 0.5
LINC00221-202ENST00000619530 RNF20Q5VTR2 975 aa18.17■□□□□ 0.5
LINC00221-202ENST00000619530 ARHGEF16Q5VV41 709 aa18.17■□□□□ 0.5
LINC00221-202ENST00000619530 RAB11FIP4Q86YS3 637 aa18.17■□□□□ 0.5
LINC00221-202ENST00000619530 TDHQ8IZJ6 230 aa18.17■□□□□ 0.5
LINC00221-202ENST00000619530 ZNF654Q8IZM8 581 aa18.17■□□□□ 0.5
LINC00221-202ENST00000619530 NSUN6Q8TEA1 469 aaKnown RBP18.17■□□□□ 0.5
LINC00221-202ENST00000619530 MTMR8Q96EF0 704 aa18.17■□□□□ 0.5
LINC00221-202ENST00000619530 RMDN3Q96TC7 470 aa18.17■□□□□ 0.5
LINC00221-202ENST00000619530 RIOX1Q9H6W3 641 aa18.17■□□□□ 0.5
LINC00221-202ENST00000619530 ELP1O95163 1332 aa18.17■□□□□ 0.5
LINC00221-202ENST00000619530 LRRC37A2A6NM11 1700 aa18.16■□□□□ 0.5
LINC00221-202ENST00000619530 SH2B2O14492 632 aaPredicted RBP18.16■□□□□ 0.5
LINC00221-202ENST00000619530 CYTH3O43739 400 aa18.16■□□□□ 0.5
LINC00221-202ENST00000619530 DUSP28Q4G0W2 176 aa18.16■□□□□ 0.5
LINC00221-202ENST00000619530 TMTC2Q8N394 836 aa18.16■□□□□ 0.5
LINC00221-202ENST00000619530 CTCFLQ8NI51 663 aaPredicted RBP18.16■□□□□ 0.5
LINC00221-202ENST00000619530 TMEM87BQ96K49 555 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms