RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 SNRNP48Q6IEG0 339 aaKnown RBP10.77□□□□□ -0.69
SYN3-213ENST00000619146 HSCBQ8IWL3 235 aa10.77□□□□□ -0.69
SYN3-213ENST00000619146 MB21D2Q8IYB1 491 aaPredicted RBP10.77□□□□□ -0.69
SYN3-213ENST00000619146 ZNF444Q8N0Y2 327 aaPredicted RBP10.77□□□□□ -0.69
SYN3-213ENST00000619146 CPXCR1Q8N123 301 aa10.77□□□□□ -0.69
SYN3-213ENST00000619146 FBXL16Q8N461 479 aa10.77□□□□□ -0.69
SYN3-213ENST00000619146 KLHDC9Q8NEP7 349 aa10.77□□□□□ -0.69
SYN3-213ENST00000619146 DDX11Q96FC9 970 aa10.77□□□□□ -0.69
SYN3-213ENST00000619146 TMEM87BQ96K49 555 aa10.77□□□□□ -0.69
SYN3-213ENST00000619146 GLT1D1Q96MS3 346 aa10.77□□□□□ -0.69
SYN3-213ENST00000619146 TOX2Q96NM4 488 aa10.77□□□□□ -0.69
SYN3-213ENST00000619146 FAM184BQ9ULE4 1060 aa10.77□□□□□ -0.69
SYN3-213ENST00000619146 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.77□□□□□ -0.69
SYN3-213ENST00000619146 B4E1Z4 1266 aa10.76□□□□□ -0.69
SYN3-213ENST00000619146 PRC1O43663 620 aa10.76□□□□□ -0.69
SYN3-213ENST00000619146 RANBP6O60518 1105 aaKnown RBP10.76□□□□□ -0.69
SYN3-213ENST00000619146 KDM4AO75164 1064 aa10.76□□□□□ -0.69
SYN3-213ENST00000619146 CDK8P49336 464 aa10.76□□□□□ -0.69
SYN3-213ENST00000619146 CCDC144BQ3MJ40 725 aa10.76□□□□□ -0.69
SYN3-213ENST00000619146 CCDC178Q5BJE1 867 aa10.76□□□□□ -0.69
SYN3-213ENST00000619146 KRT40Q6A162 431 aa10.76□□□□□ -0.69
SYN3-213ENST00000619146 CCSAPQ6IQ19 270 aaPredicted RBP10.76□□□□□ -0.69
SYN3-213ENST00000619146 IQCA1Q86XH1 822 aa10.76□□□□□ -0.69
SYN3-213ENST00000619146 TMTC2Q8N394 836 aa10.76□□□□□ -0.69
SYN3-213ENST00000619146 TMEM199Q8N511 208 aa10.76□□□□□ -0.69
SYN3-213ENST00000619146 CCDC17Q96LX7 622 aa10.76□□□□□ -0.69
SYN3-213ENST00000619146 TTC14Q96N46 770 aa10.76□□□□□ -0.69
SYN3-213ENST00000619146 UBAC1Q9BSL1 405 aa10.76□□□□□ -0.69
SYN3-213ENST00000619146 TSEN34Q9BSV6 310 aaKnown RBP10.76□□□□□ -0.69
SYN3-213ENST00000619146 EPHX3Q9H6B9 360 aa10.76□□□□□ -0.69
SYN3-213ENST00000619146 SH2D4AQ9H788 454 aa10.76□□□□□ -0.69
SYN3-213ENST00000619146 SLC28A3Q9HAS3 691 aa10.76□□□□□ -0.69
SYN3-213ENST00000619146 ZSWIM5Q9P217 1185 aa10.76□□□□□ -0.69
SYN3-213ENST00000619146 DAXXQ9UER7 740 aaPredicted RBP10.76□□□□□ -0.69
SYN3-213ENST00000619146 ZNF214Q9UL59 606 aaPredicted RBP10.76□□□□□ -0.69
SYN3-213ENST00000619146 PPP1R9AQ9ULJ8 1098 aa10.76□□□□□ -0.69
SYN3-213ENST00000619146 NEDD4P46934 1319 aa10.76□□□□□ -0.69
SYN3-213ENST00000619146 NLRC5Q86WI3 1866 aa10.76□□□□□ -0.69
SYN3-213ENST00000619146 SIP14410 1827 aa10.75□□□□□ -0.69
SYN3-213ENST00000619146 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.75□□□□□ -0.69
SYN3-213ENST00000619146 ERICH2A1L162 156 aa10.75□□□□□ -0.69
SYN3-213ENST00000619146 MOXD2PA6NHM9 499 aa10.75□□□□□ -0.69
SYN3-213ENST00000619146 TSPY2A6NKD2 308 aa10.75□□□□□ -0.69
SYN3-213ENST00000619146 ARVCFO00192 962 aa10.75□□□□□ -0.69
SYN3-213ENST00000619146 CDK7P50613 346 aa10.75□□□□□ -0.69
SYN3-213ENST00000619146 GNASQ5JWF2 1037 aa10.75□□□□□ -0.69
SYN3-213ENST00000619146 PPP4R3BQ5MIZ7 849 aa10.75□□□□□ -0.69
SYN3-213ENST00000619146 RASIP1Q5U651 963 aa10.75□□□□□ -0.69
SYN3-213ENST00000619146 NOL8Q76FK4 1167 aaKnown RBP10.75□□□□□ -0.69
SYN3-213ENST00000619146 FAM126BQ8IXS8 530 aa10.75□□□□□ -0.69
SYN3-213ENST00000619146 REPS2Q8NFH8 660 aa10.75□□□□□ -0.69
SYN3-213ENST00000619146 PPP1R13LQ8WUF5 828 aa10.75□□□□□ -0.69
SYN3-213ENST00000619146 IL23AQ9NPF7 189 aa10.75□□□□□ -0.69
SYN3-213ENST00000619146 INCENPQ9NQS7 918 aa10.75□□□□□ -0.69
SYN3-213ENST00000619146 HOMER2Q9NSB8 354 aa10.75□□□□□ -0.69
SYN3-213ENST00000619146 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.75□□□□□ -0.69
SYN3-213ENST00000619146 NRBP1Q9UHY1 535 aa10.75□□□□□ -0.69
SYN3-213ENST00000619146 ADAMTS5Q9UNA0 930 aa10.75□□□□□ -0.69
SYN3-213ENST00000619146 LIMCH1Q9UPQ0 1083 aa10.75□□□□□ -0.69
SYN3-213ENST00000619146 C5orf42Q9H799 3197 aa10.75□□□□□ -0.69
SYN3-213ENST00000619146 ATG2AQ2TAZ0 1938 aa10.74□□□□□ -0.69
SYN3-213ENST00000619146 WDFY4Q6ZS81 3184 aa10.74□□□□□ -0.69
SYN3-213ENST00000619146 A0A0U1RQG5 324 aaPredicted RBP10.74□□□□□ -0.69
SYN3-213ENST00000619146 FAM86C2PA6NEL3 165 aa10.74□□□□□ -0.69
SYN3-213ENST00000619146 ZBBXA8MT70 800 aa10.74□□□□□ -0.69
SYN3-213ENST00000619146 TLR3O15455 904 aaKnown RBP10.74□□□□□ -0.69
SYN3-213ENST00000619146 DUSP11O75319 330 aaKnown RBP10.74□□□□□ -0.69
SYN3-213ENST00000619146 PRDM1O75626 825 aa10.74□□□□□ -0.69
SYN3-213ENST00000619146 FGBP02675 491 aa10.74□□□□□ -0.69
SYN3-213ENST00000619146 TSPY3P0CV98 308 aa10.74□□□□□ -0.69
SYN3-213ENST00000619146 TSPY8P0CW00 308 aa10.74□□□□□ -0.69
SYN3-213ENST00000619146 BMP1P13497 986 aa10.74□□□□□ -0.69
SYN3-213ENST00000619146 CPA1P15085 419 aa10.74□□□□□ -0.69
SYN3-213ENST00000619146 RASA1P20936 1047 aa10.74□□□□□ -0.69
SYN3-213ENST00000619146 AK2P54819 239 aa10.74□□□□□ -0.69
SYN3-213ENST00000619146 TFAP4Q01664 338 aa10.74□□□□□ -0.69
SYN3-213ENST00000619146 ACVR2BQ13705 512 aa10.74□□□□□ -0.69
SYN3-213ENST00000619146 RAB30Q15771 203 aa10.74□□□□□ -0.69
SYN3-213ENST00000619146 TMEM67Q5HYA8 995 aa10.74□□□□□ -0.69
SYN3-213ENST00000619146 PPP2R2DQ66LE6 453 aa10.74□□□□□ -0.69
SYN3-213ENST00000619146 PSRC1Q6PGN9 363 aaPredicted RBP10.74□□□□□ -0.69
SYN3-213ENST00000619146 CCDC174Q6PII3 467 aa10.74□□□□□ -0.69
SYN3-213ENST00000619146 CXCL17Q6UXB2 119 aa10.74□□□□□ -0.69
SYN3-213ENST00000619146 SCLYQ96I15 445 aa10.74□□□□□ -0.69
SYN3-213ENST00000619146 ZSCAN31Q96LW9 406 aaPredicted RBP10.74□□□□□ -0.69
SYN3-213ENST00000619146 AGXT2Q9BYV1 514 aa10.74□□□□□ -0.69
SYN3-213ENST00000619146 TRPV6Q9H1D0 765 aa10.74□□□□□ -0.69
SYN3-213ENST00000619146 RAVER2Q9HCJ3 691 aaKnown RBP10.74□□□□□ -0.69
SYN3-213ENST00000619146 GOPCQ9HD26 462 aa10.74□□□□□ -0.69
SYN3-213ENST00000619146 TCP11L1Q9NUJ3 509 aa10.74□□□□□ -0.69
SYN3-213ENST00000619146 DIS3Q9Y2L1 958 aaKnown RBP10.74□□□□□ -0.69
SYN3-213ENST00000619146 TRIOO75962 3097 aa10.74□□□□□ -0.69
SYN3-213ENST00000619146 MROH7Q68CQ1 1323 aa10.74□□□□□ -0.69
SYN3-213ENST00000619146 MYO7AQ13402 2215 aa10.74□□□□□ -0.69
SYN3-213ENST00000619146 K7ELQ4 463 aaPredicted RBP10.73□□□□□ -0.69
SYN3-213ENST00000619146 IFIT3O14879 490 aaKnown RBP10.73□□□□□ -0.69
SYN3-213ENST00000619146 LIFRP42702 1097 aa10.73□□□□□ -0.69
SYN3-213ENST00000619146 ANTXR2P58335 489 aa10.73□□□□□ -0.69
SYN3-213ENST00000619146 PSMC6P62333 389 aa10.73□□□□□ -0.69
SYN3-213ENST00000619146 TMEM63BQ5T3F8 832 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms