RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 MRPS25P82663 173 aaKnown RBP3.34□□□□□ -1.87
LPP-221ENST00000618621 EHHADHQ08426 723 aa3.34□□□□□ -1.87
LPP-221ENST00000618621 VSIG1Q86XK7 387 aa3.34□□□□□ -1.87
LPP-221ENST00000618621 ELOA2Q8IYF1 753 aaPredicted RBP3.34□□□□□ -1.87
LPP-221ENST00000618621 BCAS4Q8TDM0 211 aa3.34□□□□□ -1.87
LPP-221ENST00000618621 HINFPQ9BQA5 517 aa3.34□□□□□ -1.87
LPP-221ENST00000618621 TXLNGQ9NUQ3 528 aa3.34□□□□□ -1.87
LPP-221ENST00000618621 DOPEY2Q9Y3R5 2298 aa3.34□□□□□ -1.87
LPP-221ENST00000618621 TARSL2A2RTX5 802 aaKnown RBP3.34□□□□□ -1.87
LPP-221ENST00000618621 LGALS16A8MUM7 142 aa3.34□□□□□ -1.87
LPP-221ENST00000618621 CREB3O43889 395 aa3.34□□□□□ -1.87
LPP-221ENST00000618621 PCCAP05165 728 aaPredicted RBP3.34□□□□□ -1.87
LPP-221ENST00000618621 ANXA13P27216 316 aa3.34□□□□□ -1.87
LPP-221ENST00000618621 PHBP35232 272 aa3.34□□□□□ -1.87
LPP-221ENST00000618621 EFCAB13Q8IY85 973 aa3.34□□□□□ -1.87
LPP-221ENST00000618621 TMC2Q8TDI7 906 aa3.34□□□□□ -1.87
LPP-221ENST00000618621 RIC8AQ9NPQ8 531 aa3.34□□□□□ -1.87
LPP-221ENST00000618621 MYO1CO00159 1063 aa3.34□□□□□ -1.88
LPP-221ENST00000618621 XRCC5P13010 732 aaKnown RBP3.34□□□□□ -1.88
LPP-221ENST00000618621 CTNNA1P35221 906 aaKnown RBP3.34□□□□□ -1.88
LPP-221ENST00000618621 GUCY2DQ02846 1103 aa3.34□□□□□ -1.88
LPP-221ENST00000618621 APLFQ8IW19 511 aaPredicted RBP3.34□□□□□ -1.88
LPP-221ENST00000618621 GABPB2Q8TAK5 448 aaPredicted RBP3.34□□□□□ -1.88
LPP-221ENST00000618621 FAM114A2Q9NRY5 505 aa3.34□□□□□ -1.88
LPP-221ENST00000618621 GJB4Q9NTQ9 266 aa3.34□□□□□ -1.88
LPP-221ENST00000618621 FHOD1Q9Y613 1164 aa3.34□□□□□ -1.88
LPP-221ENST00000618621 GMNCA6NCL1 334 aa3.34□□□□□ -1.88
LPP-221ENST00000618621 CRCPO75575 148 aa3.34□□□□□ -1.88
LPP-221ENST00000618621 H2AFZP0C0S5 128 aa3.34□□□□□ -1.88
LPP-221ENST00000618621 EIF4A3P38919 411 aaKnown RBP3.34□□□□□ -1.88
LPP-221ENST00000618621 ZNF827Q17R98 1081 aa3.34□□□□□ -1.88
LPP-221ENST00000618621 H2AFVQ71UI9 128 aa3.34□□□□□ -1.88
LPP-221ENST00000618621 GET4Q7L5D6 327 aaPredicted RBP3.34□□□□□ -1.88
LPP-221ENST00000618621 NEK8Q86SG6 692 aa3.34□□□□□ -1.88
LPP-221ENST00000618621 KRT12Q99456 494 aa3.34□□□□□ -1.88
LPP-221ENST00000618621 SRPRBQ9Y5M8 271 aaKnown RBP3.34□□□□□ -1.88
LPP-221ENST00000618621 PRPF3O43395 683 aaKnown RBP3.34□□□□□ -1.88
LPP-221ENST00000618621 TROVE2P10155 538 aaKnown RBP eCLIP3.34□□□□□ -1.88
LPP-221ENST00000618621 AATKQ6ZMQ8 1374 aa3.34□□□□□ -1.88
LPP-221ENST00000618621 SHANK2Q9UPX8 1470 aa3.34□□□□□ -1.88
LPP-221ENST00000618621 DUOX2Q9NRD8 1548 aa3.34□□□□□ -1.88
LPP-221ENST00000618621 MYCNP04198 464 aaPredicted RBP3.34□□□□□ -1.88
LPP-221ENST00000618621 CDC37Q16543 378 aaPredicted RBP3.34□□□□□ -1.88
LPP-221ENST00000618621 MGARPQ8TDB4 240 aa3.34□□□□□ -1.88
LPP-221ENST00000618621 NCAPGQ9BPX3 1015 aa3.34□□□□□ -1.88
LPP-221ENST00000618621 DAAM1Q9Y4D1 1078 aa3.34□□□□□ -1.88
LPP-221ENST00000618621 TCP11X2Q5H9J9 407 aa3.34□□□□□ -1.88
LPP-221ENST00000618621 TRIM42Q8IWZ5 723 aa3.34□□□□□ -1.88
LPP-221ENST00000618621 ANKRD35Q8N283 1001 aa3.34□□□□□ -1.88
LPP-221ENST00000618621 ASIC3Q9UHC3 531 aa3.34□□□□□ -1.88
LPP-221ENST00000618621 hCG_1642624A0A1W2PR95 340 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 CORO7P57737 925 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 ZNF658Q5TYW1 1059 aaPredicted RBP3.33□□□□□ -1.88
LPP-221ENST00000618621 FNBP4Q8N3X1 1017 aaPredicted RBP3.33□□□□□ -1.88
LPP-221ENST00000618621 GOLPH3LQ9H4A5 285 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 FAM204AQ9H8W3 233 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 USP40Q9NVE5 1235 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 DDX25Q9UHL0 483 aaKnown RBP3.33□□□□□ -1.88
LPP-221ENST00000618621 LCMT1Q9UIC8 334 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 MAGI3Q5TCQ9 1506 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.33□□□□□ -1.88
LPP-221ENST00000618621 KLRF2D3W0D1 207 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 OPHN1O60890 802 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 RESP18Q5W5W9 173 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 PPANQ9NQ55 473 aaKnown RBP3.33□□□□□ -1.88
LPP-221ENST00000618621 ZSWIM5Q9P217 1185 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 PNPLA6Q8IY17 1366 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 EVI5O60447 810 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 GAP43P17677 238 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 CCZ1BP86790 482 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 CCZ1P86791 482 aaPredicted RBP3.33□□□□□ -1.88
LPP-221ENST00000618621 CUL1Q13616 776 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 ANKRD42Q8N9B4 389 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 TGFBRAP1Q8WUH2 860 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 OSBP2Q969R2 916 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 NBPF3Q9H094 633 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 EPB41L5Q9HCM4 733 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 PCDHA12Q9UN75 941 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 RGS12O14924 1447 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 WDR19Q8NEZ3 1342 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 GNPATO15228 680 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 COBLO75128 1261 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 TTLL12Q14166 644 aaPredicted RBP3.33□□□□□ -1.88
LPP-221ENST00000618621 PPP1R2P3Q6NXS1 205 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 TOGARAM2Q6ZUX3 1019 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 U2AF1L4Q8WU68 220 aaKnown RBP3.33□□□□□ -1.88
LPP-221ENST00000618621 STK17AQ9UEE5 414 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 BTBD18B2RXH4 712 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 SH3BP5O60239 455 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 PPARDQ03181 441 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 EXOC3L4Q17RC7 722 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 REXO1Q8N1G1 1221 aaKnown RBP3.33□□□□□ -1.88
LPP-221ENST00000618621 TRIM31Q9BZY9 425 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 ACTR5Q9H9F9 607 aaPredicted RBP3.33□□□□□ -1.88
LPP-221ENST00000618621 LRRD1A4D1F6 860 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 USP17L12C9JPN9 530 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 USP17L21D6R901 530 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 FOXP2O15409 715 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 POLR2MP0CAP2 368 aa3.33□□□□□ -1.88
LPP-221ENST00000618621 TEKT1Q969V4 418 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms