RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 GGCXP38435 758 aa22.74■■□□□ 1.23
NEK3-208ENST00000618534 DDB1Q16531 1140 aa22.74■■□□□ 1.23
NEK3-208ENST00000618534 LETM2Q2VYF4 491 aa22.74■■□□□ 1.23
NEK3-208ENST00000618534 CCDC42Q96M95 316 aa22.74■■□□□ 1.23
NEK3-208ENST00000618534 C7orf25Q9BPX7 421 aa22.74■■□□□ 1.23
NEK3-208ENST00000618534 MKNK2Q9HBH9 465 aa22.74■■□□□ 1.23
NEK3-208ENST00000618534 ROBO1Q9Y6N7 1651 aa22.74■■□□□ 1.23
NEK3-208ENST00000618534 A0A1W2PQJ5 194 aa22.73■■□□□ 1.23
NEK3-208ENST00000618534 GOLGA8HP0CJ92 632 aa22.73■■□□□ 1.23
NEK3-208ENST00000618534 CDK17Q00537 523 aa22.73■■□□□ 1.23
NEK3-208ENST00000618534 CCDC96Q2M329 555 aa22.73■■□□□ 1.23
NEK3-208ENST00000618534 FIGNQ5HY92 759 aa22.73■■□□□ 1.23
NEK3-208ENST00000618534 TXNRD3Q86VQ6 643 aa22.73■■□□□ 1.23
NEK3-208ENST00000618534 AK8Q96MA6 479 aa22.73■■□□□ 1.23
NEK3-208ENST00000618534 HINFPQ9BQA5 517 aa22.73■■□□□ 1.23
NEK3-208ENST00000618534 CRACR2AQ9BSW2 395 aa22.73■■□□□ 1.23
NEK3-208ENST00000618534 CPVLQ9H3G5 476 aa22.73■■□□□ 1.23
NEK3-208ENST00000618534 PLEKHA4Q9H4M7 779 aa22.73■■□□□ 1.23
NEK3-208ENST00000618534 CAPN6Q9Y6Q1 641 aa22.73■■□□□ 1.23
NEK3-208ENST00000618534 CCNT1O60563 726 aaKnown RBP22.73■■□□□ 1.23
NEK3-208ENST00000618534 RPS8P62241 208 aaKnown RBP22.73■■□□□ 1.23
NEK3-208ENST00000618534 SPA17Q15506 151 aa22.73■■□□□ 1.23
NEK3-208ENST00000618534 FKBP15Q5T1M5 1219 aa22.73■■□□□ 1.23
NEK3-208ENST00000618534 SLC44A5Q8NCS7 719 aa22.73■■□□□ 1.23
NEK3-208ENST00000618534 KIAA0895Q8NCT3 520 aa22.73■■□□□ 1.23
NEK3-208ENST00000618534 TSGA10Q9BZW7 698 aa22.73■■□□□ 1.23
NEK3-208ENST00000618534 RSPH14Q9UHP6 348 aa22.73■■□□□ 1.23
NEK3-208ENST00000618534 TSPY3P0CV98 308 aa22.72■■□□□ 1.23
NEK3-208ENST00000618534 TSPY8P0CW00 308 aa22.72■■□□□ 1.23
NEK3-208ENST00000618534 SNX12Q9UMY4 172 aa22.72■■□□□ 1.23
NEK3-208ENST00000618534 AGPSO00116 658 aa22.72■■□□□ 1.23
NEK3-208ENST00000618534 EPHB6O15197 1021 aa22.72■■□□□ 1.23
NEK3-208ENST00000618534 MAPK8IP2Q13387 824 aaPredicted RBP22.72■■□□□ 1.23
NEK3-208ENST00000618534 CREG2Q8IUH2 290 aa22.72■■□□□ 1.23
NEK3-208ENST00000618534 FNBP4Q8N3X1 1017 aaPredicted RBP22.72■■□□□ 1.23
NEK3-208ENST00000618534 MARCH10Q8NA82 808 aaPredicted RBP22.72■■□□□ 1.23
NEK3-208ENST00000618534 DRC1Q96MC2 740 aa22.72■■□□□ 1.23
NEK3-208ENST00000618534 SEMA6BQ9H3T3 888 aa22.72■■□□□ 1.23
NEK3-208ENST00000618534 MLXIPQ9HAP2 919 aa22.72■■□□□ 1.23
NEK3-208ENST00000618534 STX8Q9UNK0 236 aa22.72■■□□□ 1.23
NEK3-208ENST00000618534 COL16A1Q07092 1604 aaPredicted RBP22.72■■□□□ 1.23
NEK3-208ENST00000618534 PALM3A6NDB9 673 aaPredicted RBP22.71■■□□□ 1.23
NEK3-208ENST00000618534 IQCEQ6IPM2 695 aa22.71■■□□□ 1.23
NEK3-208ENST00000618534 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.71■■□□□ 1.23
NEK3-208ENST00000618534 SH3RF3Q8TEJ3 882 aaPredicted RBP22.71■■□□□ 1.23
NEK3-208ENST00000618534 ARHGAP20Q9P2F6 1191 aa22.71■■□□□ 1.23
NEK3-208ENST00000618534 TECP42680 631 aa22.71■■□□□ 1.23
NEK3-208ENST00000618534 NAPAP54920 295 aa22.71■■□□□ 1.23
NEK3-208ENST00000618534 EZH2Q15910 746 aaKnown RBP22.71■■□□□ 1.23
NEK3-208ENST00000618534 SMARCC1Q92922 1105 aaPredicted RBP22.71■■□□□ 1.23
NEK3-208ENST00000618534 TMEM47Q9BQJ4 181 aa22.71■■□□□ 1.23
NEK3-208ENST00000618534 IFIH1Q9BYX4 1025 aaKnown RBP22.71■■□□□ 1.23
NEK3-208ENST00000618534 SH2D4AQ9H788 454 aa22.71■■□□□ 1.23
NEK3-208ENST00000618534 SLC39A2Q9NP94 309 aa22.71■■□□□ 1.23
NEK3-208ENST00000618534 SMIM5Q71RC9 77 aa22.7■■□□□ 1.22
NEK3-208ENST00000618534 C2CD5Q86YS7 1000 aa22.7■■□□□ 1.22
NEK3-208ENST00000618534 GPIHBP1Q8IV16 184 aa22.7■■□□□ 1.22
NEK3-208ENST00000618534 TRIM58Q8NG06 486 aa22.7■■□□□ 1.22
NEK3-208ENST00000618534 MMTAG2Q9BU76 263 aaKnown RBP22.7■■□□□ 1.22
NEK3-208ENST00000618534 ZMYND12Q9H0C1 365 aa22.7■■□□□ 1.22
NEK3-208ENST00000618534 PLAGL2Q9UPG8 496 aa22.7■■□□□ 1.22
NEK3-208ENST00000618534 JRKLQ9Y4A0 524 aa22.7■■□□□ 1.22
NEK3-208ENST00000618534 PCDHA13Q9Y5I0 950 aa22.7■■□□□ 1.22
NEK3-208ENST00000618534 ROBO3Q96MS0 1386 aa22.7■■□□□ 1.22
NEK3-208ENST00000618534 MOCS3O95396 460 aa22.7■■□□□ 1.22
NEK3-208ENST00000618534 NONOQ15233 471 aaKnown RBP eCLIP22.7■■□□□ 1.22
NEK3-208ENST00000618534 TBC1D9BQ66K14 1250 aa22.7■■□□□ 1.22
NEK3-208ENST00000618534 CNNM4Q6P4Q7 775 aa22.7■■□□□ 1.22
NEK3-208ENST00000618534 KRT25Q7Z3Z0 450 aa22.7■■□□□ 1.22
NEK3-208ENST00000618534 AENQ8WTP8 325 aaKnown RBP22.7■■□□□ 1.22
NEK3-208ENST00000618534 HDAC7Q8WUI4 952 aa22.7■■□□□ 1.22
NEK3-208ENST00000618534 FAM207AQ9NSI2 230 aaPredicted RBP22.7■■□□□ 1.22
NEK3-208ENST00000618534 SIK3Q9Y2K2 1263 aa22.7■■□□□ 1.22
NEK3-208ENST00000618534 KLRF2D3W0D1 207 aa22.69■■□□□ 1.22
NEK3-208ENST00000618534 TACC1O75410 805 aa22.69■■□□□ 1.22
NEK3-208ENST00000618534 HNRNPH3P31942 346 aaKnown RBP22.69■■□□□ 1.22
NEK3-208ENST00000618534 PPP1R2P41236 205 aa22.69■■□□□ 1.22
NEK3-208ENST00000618534 TMED8Q6PL24 325 aaPredicted RBP22.69■■□□□ 1.22
NEK3-208ENST00000618534 USO1O60763 962 aaKnown RBP22.69■■□□□ 1.22
NEK3-208ENST00000618534 KIF11P52732 1056 aa22.69■■□□□ 1.22
NEK3-208ENST00000618534 SLC10A5Q5PT55 438 aa22.69■■□□□ 1.22
NEK3-208ENST00000618534 MMGT1Q8N4V1 131 aa22.69■■□□□ 1.22
NEK3-208ENST00000618534 ANKRD2Q9GZV1 360 aa22.69■■□□□ 1.22
NEK3-208ENST00000618534 FAM184BQ9ULE4 1060 aa22.69■■□□□ 1.22
NEK3-208ENST00000618534 EIF4A3P38919 411 aaKnown RBP22.68■■□□□ 1.22
NEK3-208ENST00000618534 AMPD3Q01432 767 aa22.68■■□□□ 1.22
NEK3-208ENST00000618534 VWA3BQ502W6 1294 aa22.68■■□□□ 1.22
NEK3-208ENST00000618534 CENPPQ6IPU0 288 aa22.68■■□□□ 1.22
NEK3-208ENST00000618534 CCDC70Q6NSX1 233 aa22.68■■□□□ 1.22
NEK3-208ENST00000618534 NEK8Q86SG6 692 aa22.68■■□□□ 1.22
NEK3-208ENST00000618534 ZNF444Q8N0Y2 327 aaPredicted RBP22.68■■□□□ 1.22
NEK3-208ENST00000618534 CCDC24Q8N4L8 307 aa22.68■■□□□ 1.22
NEK3-208ENST00000618534 LRRC1Q9BTT6 524 aa22.68■■□□□ 1.22
NEK3-208ENST00000618534 STRCQ7RTU9 1775 aa22.68■■□□□ 1.22
NEK3-208ENST00000618534 GOLGA6BA6NDN3 693 aa22.68■■□□□ 1.22
NEK3-208ENST00000618534 PPFIA4O75335 1185 aa22.68■■□□□ 1.22
NEK3-208ENST00000618534 MRPS25P82663 173 aaKnown RBP22.68■■□□□ 1.22
NEK3-208ENST00000618534 NDST4Q9H3R1 872 aa22.68■■□□□ 1.22
NEK3-208ENST00000618534 DMGDHQ9UI17 866 aaKnown RBP22.68■■□□□ 1.22
NEK3-208ENST00000618534 COL5A3P25940 1745 aaPredicted RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms