RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 ATP8B2P98198 1209 aa5.51□□□□□ -1.53
SNCA-213ENST00000618500 TCF15Q12870 199 aa5.51□□□□□ -1.53
SNCA-213ENST00000618500 CCDC184Q52MB2 194 aa5.51□□□□□ -1.53
SNCA-213ENST00000618500 NAALADL2Q58DX5 795 aa5.51□□□□□ -1.53
SNCA-213ENST00000618500 MCTP2Q6DN12 878 aa5.51□□□□□ -1.53
SNCA-213ENST00000618500 AMOTL1Q8IY63 956 aa5.51□□□□□ -1.53
SNCA-213ENST00000618500 CCDC144CPQ8IYA2 1237 aa5.51□□□□□ -1.53
SNCA-213ENST00000618500 DDX11Q96FC9 970 aa5.51□□□□□ -1.53
SNCA-213ENST00000618500 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.51□□□□□ -1.53
SNCA-213ENST00000618500 TRPV6Q9H1D0 765 aa5.51□□□□□ -1.53
SNCA-213ENST00000618500 NSUN3Q9H649 340 aaKnown RBP5.51□□□□□ -1.53
SNCA-213ENST00000618500 CIZ1Q9ULV3 898 aaPredicted RBP5.51□□□□□ -1.53
SNCA-213ENST00000618500 LAMA3Q16787 3333 aa5.51□□□□□ -1.53
SNCA-213ENST00000618500 A6NJR5 290 aa5.51□□□□□ -1.53
SNCA-213ENST00000618500 EYA4O95677 639 aa5.51□□□□□ -1.53
SNCA-213ENST00000618500 PDE6AP16499 860 aa5.51□□□□□ -1.53
SNCA-213ENST00000618500 SKIV2LQ15477 1246 aaKnown RBP5.51□□□□□ -1.53
SNCA-213ENST00000618500 TRIM71Q2Q1W2 868 aaKnown RBP5.51□□□□□ -1.53
SNCA-213ENST00000618500 FAM83BQ5T0W9 1011 aa5.51□□□□□ -1.53
SNCA-213ENST00000618500 TRAF7Q6Q0C0 670 aa5.51□□□□□ -1.53
SNCA-213ENST00000618500 RGS22Q8NE09 1264 aa5.51□□□□□ -1.53
SNCA-213ENST00000618500 ARNTL2Q8WYA1 636 aa5.51□□□□□ -1.53
SNCA-213ENST00000618500 SUGCTQ9HAC7 445 aa5.51□□□□□ -1.53
SNCA-213ENST00000618500 NOB1Q9ULX3 412 aaKnown RBP5.51□□□□□ -1.53
SNCA-213ENST00000618500 IL9P15248 144 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 SELPP16109 830 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 NT5C2P49902 561 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 PTK7Q13308 1070 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 UBE3CQ15386 1083 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 CDCA7LQ96GN5 454 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 INSL6Q9Y581 213 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.5□□□□□ -1.53
SNCA-213ENST00000618500 TMEM221A6NGB7 291 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 ZBBXA8MT70 800 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 M0R296 226 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 ATF7P17544 494 aaPredicted RBP5.5□□□□□ -1.53
SNCA-213ENST00000618500 HOXC8P31273 242 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 CCL23P55773 120 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 ZXDAP98168 799 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 COASYQ13057 564 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 GPNMBQ14956 572 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 BRDTQ58F21 947 aaPredicted RBP5.5□□□□□ -1.53
SNCA-213ENST00000618500 CXCL17Q6UXB2 119 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 TRIM67Q6ZTA4 783 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 HFE2Q6ZVN8 426 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 FBXO22Q8NEZ5 403 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 MPHOSPH6Q99547 160 aaKnown RBP5.5□□□□□ -1.53
SNCA-213ENST00000618500 MCM9Q9NXL9 1143 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 RIPK3Q9Y572 518 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 PNMA6EA0A0J9YXQ4 647 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 MPHOSPH10O00566 681 aaKnown RBP5.5□□□□□ -1.53
SNCA-213ENST00000618500 IPO8O15397 1037 aaKnown RBP5.5□□□□□ -1.53
SNCA-213ENST00000618500 MBTPS2O43462 519 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 NDUFB10O96000 172 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 ADD2P35612 726 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 LRRC8DQ7L1W4 858 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 FBXL6Q8N531 539 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 DNERQ8NFT8 737 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 GDPD5Q8WTR4 605 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 STAG1Q8WVM7 1258 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 BBXQ8WY36 941 aaPredicted RBP5.5□□□□□ -1.53
SNCA-213ENST00000618500 APBB2Q92870 758 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 CTAGE1Q96RT6 745 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 PLVAPQ9BX97 442 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 A1CFQ9NQ94 594 aaKnown RBP5.5□□□□□ -1.53
SNCA-213ENST00000618500 CYP39A1Q9NYL5 469 aa5.5□□□□□ -1.53
SNCA-213ENST00000618500 ADD3Q9UEY8 706 aaKnown RBP5.5□□□□□ -1.53
SNCA-213ENST00000618500 RFXAPO00287 272 aa5.49□□□□□ -1.53
SNCA-213ENST00000618500 AMHP03971 560 aa5.49□□□□□ -1.53
SNCA-213ENST00000618500 BEX3Q00994 111 aa5.49□□□□□ -1.53
SNCA-213ENST00000618500 NBPF20Q3BBV1 942 aa5.49□□□□□ -1.53
SNCA-213ENST00000618500 HSP90AB4PQ58FF6 505 aa5.49□□□□□ -1.53
SNCA-213ENST00000618500 BTNL9Q6UXG8 535 aa5.49□□□□□ -1.53
SNCA-213ENST00000618500 ANKRD35Q8N283 1001 aa5.49□□□□□ -1.53
SNCA-213ENST00000618500 MIGA1Q8NAN2 632 aa5.49□□□□□ -1.53
SNCA-213ENST00000618500 SCLYQ96I15 445 aa5.49□□□□□ -1.53
SNCA-213ENST00000618500 MSLNLQ96KJ4 702 aa5.49□□□□□ -1.53
SNCA-213ENST00000618500 ZNF287Q9HBT7 754 aa5.49□□□□□ -1.53
SNCA-213ENST00000618500 MRS2Q9HD23 443 aa5.49□□□□□ -1.53
SNCA-213ENST00000618500 SNRKQ9NRH2 765 aa5.49□□□□□ -1.53
SNCA-213ENST00000618500 FBXO28Q9NVF7 368 aa5.49□□□□□ -1.53
SNCA-213ENST00000618500 BDP1A6H8Y1 2624 aa5.49□□□□□ -1.53
SNCA-213ENST00000618500 B4DLN1 442 aa5.49□□□□□ -1.53
SNCA-213ENST00000618500 HAS3O00219 553 aa5.49□□□□□ -1.53
SNCA-213ENST00000618500 GALR2O43603 387 aaPredicted RBP5.49□□□□□ -1.53
SNCA-213ENST00000618500 MRPL12P52815 198 aaKnown RBP5.49□□□□□ -1.53
SNCA-213ENST00000618500 RARSP54136 660 aaKnown RBP5.49□□□□□ -1.53
SNCA-213ENST00000618500 GHRHRQ02643 423 aa5.49□□□□□ -1.53
SNCA-213ENST00000618500 SIGLEC14Q08ET2 396 aa5.49□□□□□ -1.53
SNCA-213ENST00000618500 RPAINQ86UA6 219 aa5.49□□□□□ -1.53
SNCA-213ENST00000618500 LCORLQ8N3X6 602 aa5.49□□□□□ -1.53
SNCA-213ENST00000618500 ZNF579Q8NAF0 562 aaKnown RBP5.49□□□□□ -1.53
SNCA-213ENST00000618500 CHURC1Q8WUH1 139 aa5.49□□□□□ -1.53
SNCA-213ENST00000618500 VTI1AQ96AJ9 217 aa5.49□□□□□ -1.53
SNCA-213ENST00000618500 ASIC4Q96FT7 647 aa5.49□□□□□ -1.53
SNCA-213ENST00000618500 KATNAL1Q9BW62 490 aa5.49□□□□□ -1.53
SNCA-213ENST00000618500 RANBP17Q9H2T7 1088 aaKnown RBP5.49□□□□□ -1.53
SNCA-213ENST00000618500 WDR19Q8NEZ3 1342 aa5.49□□□□□ -1.53
SNCA-213ENST00000618500 F5H6K3 240 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 GFRA3O60609 400 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms