RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 EFCAB13Q8IY85 973 aa13.58□□□□□ -0.24
SRRT-216ENST00000618262 STAG2Q8N3U4 1231 aa13.58□□□□□ -0.24
SRRT-216ENST00000618262 KAT14Q9H8E8 782 aa13.58□□□□□ -0.24
SRRT-216ENST00000618262 TMEM165Q9HC07 324 aa13.58□□□□□ -0.24
SRRT-216ENST00000618262 DDX60LQ5H9U9 1706 aaKnown RBP13.57□□□□□ -0.24
SRRT-216ENST00000618262 PHF20L1A8MW92 1017 aa13.57□□□□□ -0.24
SRRT-216ENST00000618262 HMGB1P1B2RPK0 211 aaPredicted RBP13.57□□□□□ -0.24
SRRT-216ENST00000618262 CDC27P30260 824 aa13.57□□□□□ -0.24
SRRT-216ENST00000618262 SCRN1Q12765 414 aa13.57□□□□□ -0.24
SRRT-216ENST00000618262 VGLL4Q14135 290 aa13.57□□□□□ -0.24
SRRT-216ENST00000618262 SPATS2LQ9NUQ6 558 aaKnown RBP13.57□□□□□ -0.24
SRRT-216ENST00000618262 ZBTB21Q9ULJ3 1066 aa13.57□□□□□ -0.24
SRRT-216ENST00000618262 LIMCH1Q9UPQ0 1083 aa13.57□□□□□ -0.24
SRRT-216ENST00000618262 USP17L5A8MUK1 530 aa13.57□□□□□ -0.24
SRRT-216ENST00000618262 K7ELQ4 463 aaPredicted RBP13.57□□□□□ -0.24
SRRT-216ENST00000618262 PPP1R12BO60237 982 aaPredicted RBP13.57□□□□□ -0.24
SRRT-216ENST00000618262 PDIA3P30101 505 aaKnown RBP13.57□□□□□ -0.24
SRRT-216ENST00000618262 CAP2P40123 477 aa13.57□□□□□ -0.24
SRRT-216ENST00000618262 GUCY1B3Q02153 619 aa13.57□□□□□ -0.24
SRRT-216ENST00000618262 SLC5A9Q2M3M2 681 aa13.57□□□□□ -0.24
SRRT-216ENST00000618262 KIAA1755Q5JYT7 1200 aa13.57□□□□□ -0.24
SRRT-216ENST00000618262 MYSM1Q5VVJ2 828 aa13.57□□□□□ -0.24
SRRT-216ENST00000618262 SAPCD2Q86UD0 394 aa13.57□□□□□ -0.24
SRRT-216ENST00000618262 PNMA1Q8ND90 353 aa13.57□□□□□ -0.24
SRRT-216ENST00000618262 PLEKHG4BQ96PX9 1271 aa13.57□□□□□ -0.24
SRRT-216ENST00000618262 ZNF287Q9HBT7 754 aa13.57□□□□□ -0.24
SRRT-216ENST00000618262 ZMYM6O95789 1325 aa13.57□□□□□ -0.24
SRRT-216ENST00000618262 ORC4O43929 436 aa13.56□□□□□ -0.24
SRRT-216ENST00000618262 ST3GAL1Q11201 340 aa13.56□□□□□ -0.24
SRRT-216ENST00000618262 SUPT20HL1Q3ZLR7 823 aa13.56□□□□□ -0.24
SRRT-216ENST00000618262 TTBK2Q6IQ55 1244 aa13.56□□□□□ -0.24
SRRT-216ENST00000618262 HOMER1Q86YM7 354 aa13.56□□□□□ -0.24
SRRT-216ENST00000618262 SIAH1Q8IUQ4 282 aa13.56□□□□□ -0.24
SRRT-216ENST00000618262 MRFAP1L1Q96HT8 127 aa13.56□□□□□ -0.24
SRRT-216ENST00000618262 CHAMP1Q96JM3 812 aa13.56□□□□□ -0.24
SRRT-216ENST00000618262 POLR3CQ9BUI4 534 aaPredicted RBP13.56□□□□□ -0.24
SRRT-216ENST00000618262 TM6SF1Q9BZW5 370 aa13.56□□□□□ -0.24
SRRT-216ENST00000618262 MTMR4Q9NYA4 1195 aa13.56□□□□□ -0.24
SRRT-216ENST00000618262 G3BP2Q9UN86 482 aaKnown RBP13.56□□□□□ -0.24
SRRT-216ENST00000618262 SSC5DA1L4H1 1573 aa13.56□□□□□ -0.24
SRRT-216ENST00000618262 PLEKHA8P1O95397 391 aa13.56□□□□□ -0.24
SRRT-216ENST00000618262 MTMR2Q13614 643 aa13.56□□□□□ -0.24
SRRT-216ENST00000618262 TATDN1Q6P1N9 297 aa13.56□□□□□ -0.24
SRRT-216ENST00000618262 APOA5Q6Q788 366 aa13.56□□□□□ -0.24
SRRT-216ENST00000618262 RBM12BQ8IXT5 1001 aaKnown RBP13.56□□□□□ -0.24
SRRT-216ENST00000618262 ZNF654Q8IZM8 581 aa13.56□□□□□ -0.24
SRRT-216ENST00000618262 TRIM11Q96F44 468 aa13.56□□□□□ -0.24
SRRT-216ENST00000618262 AIFM3Q96NN9 605 aa13.56□□□□□ -0.24
SRRT-216ENST00000618262 SEC23AQ15436 765 aa13.56□□□□□ -0.24
SRRT-216ENST00000618262 FKBP1CQ5VVH2 108 aa13.56□□□□□ -0.24
SRRT-216ENST00000618262 CST9Q5W186 159 aa13.56□□□□□ -0.24
SRRT-216ENST00000618262 OTUD7BQ6GQQ9 843 aa13.56□□□□□ -0.24
SRRT-216ENST00000618262 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.56□□□□□ -0.24
SRRT-216ENST00000618262 NEDD1Q8NHV4 660 aa13.56□□□□□ -0.24
SRRT-216ENST00000618262 KLRG1Q96E93 195 aa13.56□□□□□ -0.24
SRRT-216ENST00000618262 UNC45AQ9H3U1 944 aa13.56□□□□□ -0.24
SRRT-216ENST00000618262 SWAP70Q9UH65 585 aa13.56□□□□□ -0.24
SRRT-216ENST00000618262 HERC5Q9UII4 1024 aaKnown RBP13.56□□□□□ -0.24
SRRT-216ENST00000618262 ATRNL1Q5VV63 1379 aa13.56□□□□□ -0.24
SRRT-216ENST00000618262 GOLGA8AA7E2F4 631 aa13.55□□□□□ -0.24
SRRT-216ENST00000618262 ZBTB43O43298 467 aa13.55□□□□□ -0.24
SRRT-216ENST00000618262 VCAM1P19320 739 aa13.55□□□□□ -0.24
SRRT-216ENST00000618262 NF2P35240 595 aa13.55□□□□□ -0.24
SRRT-216ENST00000618262 METAP2P50579 478 aaKnown RBP eCLIP13.55□□□□□ -0.24
SRRT-216ENST00000618262 LDHDQ86WU2 507 aa13.55□□□□□ -0.24
SRRT-216ENST00000618262 FBXO18Q8NFZ0 1043 aa13.55□□□□□ -0.24
SRRT-216ENST00000618262 ECM29Q5VYK3 1845 aa13.55□□□□□ -0.24
SRRT-216ENST00000618262 FMNL1O95466 1100 aaPredicted RBP13.55□□□□□ -0.24
SRRT-216ENST00000618262 TPP2P29144 1249 aaPredicted RBP13.55□□□□□ -0.24
SRRT-216ENST00000618262 CA8P35219 290 aa13.55□□□□□ -0.24
SRRT-216ENST00000618262 HMGCS2P54868 508 aa13.55□□□□□ -0.24
SRRT-216ENST00000618262 PKP1Q13835 747 aa13.55□□□□□ -0.24
SRRT-216ENST00000618262 GOLGA5Q8TBA6 731 aa13.55□□□□□ -0.24
SRRT-216ENST00000618262 HPS5Q9UPZ3 1129 aa13.55□□□□□ -0.24
SRRT-216ENST00000618262 CFAP69A5D8W1 941 aa13.54□□□□□ -0.24
SRRT-216ENST00000618262 CPLX1O14810 134 aa13.54□□□□□ -0.24
SRRT-216ENST00000618262 NUCB2P80303 420 aa13.54□□□□□ -0.24
SRRT-216ENST00000618262 SYNE3Q6ZMZ3 975 aa13.54□□□□□ -0.24
SRRT-216ENST00000618262 CATIPQ7Z7H3 387 aa13.54□□□□□ -0.24
SRRT-216ENST00000618262 SAMD3Q8N6K7 520 aa13.54□□□□□ -0.24
SRRT-216ENST00000618262 SEZ6LQ9BYH1 1024 aa13.54□□□□□ -0.24
SRRT-216ENST00000618262 TRIM6Q9C030 488 aaPredicted RBP13.54□□□□□ -0.24
SRRT-216ENST00000618262 NACA2Q9H009 215 aa13.54□□□□□ -0.24
SRRT-216ENST00000618262 EHD4Q9H223 541 aa13.54□□□□□ -0.24
SRRT-216ENST00000618262 LMCD1Q9NZU5 365 aa13.54□□□□□ -0.24
SRRT-216ENST00000618262 ABT1Q9ULW3 272 aaKnown RBP13.54□□□□□ -0.24
SRRT-216ENST00000618262 TTLL1O95922 423 aa13.54□□□□□ -0.24
SRRT-216ENST00000618262 PYGLP06737 847 aa13.54□□□□□ -0.24
SRRT-216ENST00000618262 FGRP09769 529 aa13.54□□□□□ -0.24
SRRT-216ENST00000618262 DCAF15Q66K64 600 aa13.54□□□□□ -0.24
SRRT-216ENST00000618262 ZNF483Q8TF39 744 aaPredicted RBP13.54□□□□□ -0.24
SRRT-216ENST00000618262 FBXO28Q9NVF7 368 aa13.54□□□□□ -0.24
SRRT-216ENST00000618262 GABBR1Q9UBS5 961 aa13.54□□□□□ -0.24
SRRT-216ENST00000618262 CHADLQ6NUI6 762 aa13.53□□□□□ -0.24
SRRT-216ENST00000618262 ZC3H15Q8WU90 426 aaKnown RBP13.53□□□□□ -0.24
SRRT-216ENST00000618262 CSADQ9Y600 493 aa13.53□□□□□ -0.24
SRRT-216ENST00000618262 COMMD10Q9Y6G5 202 aa13.53□□□□□ -0.24
SRRT-216ENST00000618262 ROBO3Q96MS0 1386 aa13.53□□□□□ -0.24
SRRT-216ENST00000618262 LAMA4Q16363 1823 aa13.53□□□□□ -0.24
SRRT-216ENST00000618262 SNUPNO95149 360 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms