RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 KLRC4O43908 158 aa13.94□□□□□ -0.18
CIITA-212ENST00000618207 CHRM1P11229 460 aaPredicted RBP13.94□□□□□ -0.18
CIITA-212ENST00000618207 HMGB2P26583 209 aaKnown RBP13.94□□□□□ -0.18
CIITA-212ENST00000618207 STK4Q13043 487 aa13.94□□□□□ -0.18
CIITA-212ENST00000618207 TBX2Q13207 712 aaPredicted RBP13.94□□□□□ -0.18
CIITA-212ENST00000618207 KCNJ12Q14500 433 aa13.94□□□□□ -0.18
CIITA-212ENST00000618207 RRP1BQ14684 758 aaKnown RBP13.94□□□□□ -0.18
CIITA-212ENST00000618207 GPATCH4Q5T3I0 446 aaKnown RBP13.94□□□□□ -0.18
CIITA-212ENST00000618207 CUL5Q93034 780 aa13.94□□□□□ -0.18
CIITA-212ENST00000618207 CALML4Q96GE6 196 aa13.94□□□□□ -0.18
CIITA-212ENST00000618207 SRRTQ9BXP5 876 aaKnown RBP13.94□□□□□ -0.18
CIITA-212ENST00000618207 SLC39A2Q9NP94 309 aa13.94□□□□□ -0.18
CIITA-212ENST00000618207 KBTBD4Q9NVX7 518 aa13.94□□□□□ -0.18
CIITA-212ENST00000618207 PPP1R1BQ9UD71 204 aaPredicted RBP13.94□□□□□ -0.18
CIITA-212ENST00000618207 RWDD2AQ9UIY3 292 aa13.94□□□□□ -0.18
CIITA-212ENST00000618207 ZNF215Q9UL58 517 aaPredicted RBP13.94□□□□□ -0.18
CIITA-212ENST00000618207 F5H6K3 240 aa13.93□□□□□ -0.18
CIITA-212ENST00000618207 MYO1BO43795 1136 aa13.93□□□□□ -0.18
CIITA-212ENST00000618207 SMARCA1P28370 1054 aa13.93□□□□□ -0.18
CIITA-212ENST00000618207 GTF2F1P35269 517 aaKnown RBP eCLIP13.93□□□□□ -0.18
CIITA-212ENST00000618207 PRPHP41219 470 aa13.93□□□□□ -0.18
CIITA-212ENST00000618207 KLRC3Q07444 240 aa13.93□□□□□ -0.18
CIITA-212ENST00000618207 CDC37Q16543 378 aaPredicted RBP13.93□□□□□ -0.18
CIITA-212ENST00000618207 SIAH1Q8IUQ4 282 aa13.93□□□□□ -0.18
CIITA-212ENST00000618207 CDAN1Q8IWY9 1227 aa13.93□□□□□ -0.18
CIITA-212ENST00000618207 LARGE2Q8N3Y3 721 aa13.93□□□□□ -0.18
CIITA-212ENST00000618207 SNX29Q8TEQ0 813 aa13.93□□□□□ -0.18
CIITA-212ENST00000618207 CCDC17Q96LX7 622 aa13.93□□□□□ -0.18
CIITA-212ENST00000618207 TRIM9Q9C026 710 aa13.93□□□□□ -0.18
CIITA-212ENST00000618207 DHX36Q9H2U1 1008 aaKnown RBP13.93□□□□□ -0.18
CIITA-212ENST00000618207 MYH7BA7E2Y1 1941 aa13.93□□□□□ -0.18
CIITA-212ENST00000618207 A0A0U1RQJ8 604 aa13.93□□□□□ -0.18
CIITA-212ENST00000618207 AKR1B15C9JRZ8 316 aaPredicted RBP13.93□□□□□ -0.18
CIITA-212ENST00000618207 FXR1P51114 621 aaKnown RBP eCLIP13.93□□□□□ -0.18
CIITA-212ENST00000618207 RAD51AP2Q09MP3 1159 aa13.93□□□□□ -0.18
CIITA-212ENST00000618207 ATRIPQ8WXE1 791 aa13.93□□□□□ -0.18
CIITA-212ENST00000618207 KANSL2Q9H9L4 492 aa13.93□□□□□ -0.18
CIITA-212ENST00000618207 EXOC1Q9NV70 894 aa13.93□□□□□ -0.18
CIITA-212ENST00000618207 DDX25Q9UHL0 483 aaKnown RBP13.93□□□□□ -0.18
CIITA-212ENST00000618207 PSDA5PKW4 1024 aaPredicted RBP13.92□□□□□ -0.18
CIITA-212ENST00000618207 ECE1P42892 770 aa13.92□□□□□ -0.18
CIITA-212ENST00000618207 UBXN1Q04323 297 aa13.92□□□□□ -0.18
CIITA-212ENST00000618207 TCP11X2Q5H9J9 407 aa13.92□□□□□ -0.18
CIITA-212ENST00000618207 MIGA2Q7L4E1 593 aa13.92□□□□□ -0.18
CIITA-212ENST00000618207 CCDC84Q86UT8 332 aaPredicted RBP13.92□□□□□ -0.18
CIITA-212ENST00000618207 ADSSL1Q8N142 457 aa13.92□□□□□ -0.18
CIITA-212ENST00000618207 C7orf43Q8WVR3 580 aa13.92□□□□□ -0.18
CIITA-212ENST00000618207 RIC8AQ9NPQ8 531 aa13.92□□□□□ -0.18
CIITA-212ENST00000618207 PPP2R2CQ9Y2T4 447 aa13.92□□□□□ -0.18
CIITA-212ENST00000618207 ESYT2A0FGR8 921 aa13.92□□□□□ -0.18
CIITA-212ENST00000618207 RNF225M0QZC1 329 aaPredicted RBP13.92□□□□□ -0.18
CIITA-212ENST00000618207 ARHGAP6O43182 974 aa13.92□□□□□ -0.18
CIITA-212ENST00000618207 MRPL12P52815 198 aaKnown RBP13.92□□□□□ -0.18
CIITA-212ENST00000618207 COPB1P53618 953 aaKnown RBP13.92□□□□□ -0.18
CIITA-212ENST00000618207 TMEM266Q2M3C6 531 aa13.92□□□□□ -0.18
CIITA-212ENST00000618207 KCNK18Q7Z418 384 aa13.92□□□□□ -0.18
CIITA-212ENST00000618207 GRB10Q13322 594 aa13.91□□□□□ -0.18
CIITA-212ENST00000618207 GPIHBP1Q8IV16 184 aa13.91□□□□□ -0.18
CIITA-212ENST00000618207 LRRN4CLQ8ND94 238 aa13.91□□□□□ -0.18
CIITA-212ENST00000618207 AK8Q96MA6 479 aa13.91□□□□□ -0.18
CIITA-212ENST00000618207 MTMR9Q96QG7 549 aa13.91□□□□□ -0.18
CIITA-212ENST00000618207 CTAGE1Q96RT6 745 aa13.91□□□□□ -0.18
CIITA-212ENST00000618207 IDI2Q9BXS1 227 aa13.91□□□□□ -0.18
CIITA-212ENST00000618207 IRX2Q9BZI1 471 aaPredicted RBP13.91□□□□□ -0.18
CIITA-212ENST00000618207 LZTFL1Q9NQ48 299 aa13.91□□□□□ -0.18
CIITA-212ENST00000618207 RGS17Q9UGC6 210 aaPredicted RBP13.91□□□□□ -0.18
CIITA-212ENST00000618207 SERPINA10Q9UK55 444 aa13.91□□□□□ -0.18
CIITA-212ENST00000618207 PSMD14O00487 310 aa13.91□□□□□ -0.18
CIITA-212ENST00000618207 PSMA7O14818 248 aa13.91□□□□□ -0.18
CIITA-212ENST00000618207 NKRFO15226 690 aaKnown RBP eCLIP13.91□□□□□ -0.18
CIITA-212ENST00000618207 NDUFB10O96000 172 aa13.91□□□□□ -0.18
CIITA-212ENST00000618207 GYPCP04921 128 aa13.91□□□□□ -0.18
CIITA-212ENST00000618207 HOXA13P31271 388 aaPredicted RBP13.91□□□□□ -0.18
CIITA-212ENST00000618207 CACNB1Q02641 598 aaPredicted RBP13.91□□□□□ -0.18
CIITA-212ENST00000618207 STIM1Q13586 685 aa13.91□□□□□ -0.18
CIITA-212ENST00000618207 REXO1L1PQ8IX06 675 aa13.91□□□□□ -0.18
CIITA-212ENST00000618207 ANKRD20A12PQ8NF67 263 aa13.91□□□□□ -0.18
CIITA-212ENST00000618207 CAMKK2Q96RR4 588 aa13.91□□□□□ -0.18
CIITA-212ENST00000618207 EHD4Q9H223 541 aa13.91□□□□□ -0.18
CIITA-212ENST00000618207 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.91□□□□□ -0.18
CIITA-212ENST00000618207 A0A1W2PRG0 241 aa13.91□□□□□ -0.18
CIITA-212ENST00000618207 NCBP1Q09161 790 aaKnown RBP13.91□□□□□ -0.18
CIITA-212ENST00000618207 ECM1Q16610 540 aa13.91□□□□□ -0.18
CIITA-212ENST00000618207 RBM26Q5T8P6 1007 aaKnown RBP13.91□□□□□ -0.18
CIITA-212ENST00000618207 IRF2BP1Q8IU81 584 aa13.91□□□□□ -0.18
CIITA-212ENST00000618207 CSGALNACT2Q8N6G5 542 aa13.91□□□□□ -0.18
CIITA-212ENST00000618207 TBC1D7Q9P0N9 293 aa13.91□□□□□ -0.18
CIITA-212ENST00000618207 MYMKA6NI61 221 aa13.9□□□□□ -0.18
CIITA-212ENST00000618207 URI1O94763 535 aaPredicted RBP13.9□□□□□ -0.18
CIITA-212ENST00000618207 RHOBTB3O94955 611 aa13.9□□□□□ -0.18
CIITA-212ENST00000618207 LRRC41Q15345 812 aa13.9□□□□□ -0.18
CIITA-212ENST00000618207 KRT79Q5XKE5 535 aa13.9□□□□□ -0.18
CIITA-212ENST00000618207 CC2D2BQ6DHV5 1058 aa13.9□□□□□ -0.18
CIITA-212ENST00000618207 SLC30A10Q6XR72 485 aa13.9□□□□□ -0.18
CIITA-212ENST00000618207 SV2BQ7L1I2 683 aa13.9□□□□□ -0.18
CIITA-212ENST00000618207 TTLL6Q8N841 843 aa13.9□□□□□ -0.18
CIITA-212ENST00000618207 SECISBP2LQ93073 1101 aaKnown RBP13.9□□□□□ -0.18
CIITA-212ENST00000618207 PNMA5Q96PV4 448 aa13.9□□□□□ -0.18
CIITA-212ENST00000618207 BLOC1S4Q9NUP1 217 aa13.9□□□□□ -0.18
CIITA-212ENST00000618207 BCCIPQ9P287 314 aaKnown RBP eCLIP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms