RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 KSR1Q8IVT5 923 aa8.1□□□□□ -1.11
PDE6A-205ENST00000617647 VPS52Q8N1B4 723 aa8.1□□□□□ -1.11
PDE6A-205ENST00000617647 NME8Q8N427 588 aa8.1□□□□□ -1.11
PDE6A-205ENST00000617647 GGA2Q9UJY4 613 aa8.1□□□□□ -1.11
PDE6A-205ENST00000617647 TMA7Q9Y2S6 64 aaKnown RBP8.1□□□□□ -1.11
PDE6A-205ENST00000617647 ANKRD62A6NC57 917 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 BUB1O43683 1085 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 MBD4O95243 580 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 ALOX15P16050 662 aaPredicted RBP8.09□□□□□ -1.11
PDE6A-205ENST00000617647 XBP1P17861 261 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 CDC25AP30304 524 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 MAGEA10P43363 369 aaPredicted RBP8.09□□□□□ -1.11
PDE6A-205ENST00000617647 CARSP49589 748 aaKnown RBP8.09□□□□□ -1.11
PDE6A-205ENST00000617647 USP46P62068 366 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 ZBTB16Q05516 673 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 TOB2Q14106 344 aaPredicted RBP8.09□□□□□ -1.11
PDE6A-205ENST00000617647 CC2D2BQ6DHV5 1058 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.09□□□□□ -1.11
PDE6A-205ENST00000617647 TRAPPC11Q7Z392 1133 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 NSUN7Q8NE18 718 aaKnown RBP8.09□□□□□ -1.11
PDE6A-205ENST00000617647 HDAC7Q8WUI4 952 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 TSPAN18Q96SJ8 248 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 DRC3Q9H069 523 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 EBF2Q9HAK2 575 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 DMAP1Q9NPF5 467 aaPredicted RBP8.09□□□□□ -1.11
PDE6A-205ENST00000617647 TXLNGQ9NUQ3 528 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 MAN1B1Q9UKM7 699 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 MYOM2P54296 1465 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 KCNJ2P63252 427 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 NECTIN1Q15223 517 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 PHLDB2Q86SQ0 1253 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 FAM228AQ86W67 206 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 CCDC25Q86WR0 208 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 GRAMD1CQ8IYS0 662 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 CCDC82Q8N4S0 544 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 MDM1Q8TC05 714 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 AENQ8WTP8 325 aaKnown RBP8.09□□□□□ -1.11
PDE6A-205ENST00000617647 USP6NLQ92738 828 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 IQCDQ96DY2 449 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 COG3Q96JB2 828 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 NOX5Q96PH1 765 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 PLCB1Q9NQ66 1216 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 PFDN4Q9NQP4 134 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.09□□□□□ -1.11
PDE6A-205ENST00000617647 WDR35Q9P2L0 1181 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 MAP3K4Q9Y6R4 1608 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 A0A1W2PRG0 241 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 GTPBP6O43824 516 aaPredicted RBP8.09□□□□□ -1.11
PDE6A-205ENST00000617647 MOCS3O95396 460 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 RAPGEF3O95398 923 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 EEF2P13639 858 aaKnown RBP8.09□□□□□ -1.11
PDE6A-205ENST00000617647 MAGEA1P43355 309 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 FXR1P51114 621 aaKnown RBP eCLIP8.09□□□□□ -1.11
PDE6A-205ENST00000617647 HAND2P61296 217 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 SLC9C2Q5TAH2 1124 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 NFRKBQ6P4R8 1299 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 XAGE2Q96GT9 111 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 DPH5Q9H2P9 285 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.09□□□□□ -1.11
PDE6A-205ENST00000617647 UBN2Q6ZU65 1347 aa8.09□□□□□ -1.11
PDE6A-205ENST00000617647 ABCA9Q8IUA7 1624 aa8.09□□□□□ -1.12
PDE6A-205ENST00000617647 UBOX5O94941 541 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 GSTA1P08263 222 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 QPCTQ16769 361 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 KIAA0753Q2KHM9 967 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 TYW1BQ6NUM6 668 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 TAOK1Q7L7X3 1001 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 MIER3Q7Z3K6 550 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 LZICQ8WZA0 190 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 XPO6Q96QU8 1125 aaKnown RBP8.08□□□□□ -1.12
PDE6A-205ENST00000617647 UBE2OQ9C0C9 1292 aaKnown RBP8.08□□□□□ -1.12
PDE6A-205ENST00000617647 NDEL1Q9GZM8 345 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 SUCLA2Q9P2R7 463 aaPredicted RBP8.08□□□□□ -1.12
PDE6A-205ENST00000617647 LRWD1Q9UFC0 647 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 R3HDM2Q9Y2K5 976 aaKnown RBP8.08□□□□□ -1.12
PDE6A-205ENST00000617647 A0A0G2JS52 829 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 NUTM2BA6NNL0 878 aaPredicted RBP8.08□□□□□ -1.12
PDE6A-205ENST00000617647 NUTM2EB1AL46 878 aaPredicted RBP8.08□□□□□ -1.12
PDE6A-205ENST00000617647 DKC1O60832 514 aaKnown RBP eCLIP8.08□□□□□ -1.12
PDE6A-205ENST00000617647 EPB41P11171 864 aaKnown RBP8.08□□□□□ -1.12
PDE6A-205ENST00000617647 EPS15P42566 896 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 PDE6CP51160 858 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 DENND2CQ68D51 928 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 MAP4K1Q92918 833 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 OLFM3Q96PB7 478 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 SMC6Q96SB8 1091 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 CHP1Q99653 195 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 KRT23Q9C075 422 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 MMRN2Q9H8L6 949 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 POLR3EQ9NVU0 708 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 ZNF180Q9UJW8 692 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 TMCO1Q9UM00 188 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 ATP8A1Q9Y2Q0 1164 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 ZNF518AQ6AHZ1 1483 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 MROH2AA6NES4 1674 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 P4HA2O15460 535 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 PDE5AO76074 875 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 ETS2P15036 469 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 STX2P32856 288 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 RFC1P35251 1148 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms