RNA–Protein interactions for RNA: ENST00000617564.1

COL4A2-210, Transcript of collagen type IV alpha 2 chain, humanhuman

Gene COL4A2, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-210ENST00000617564 AGBL1Q96MI9 1066 aa14.24□□□□□ -0.13
COL4A2-210ENST00000617564 TRERF1Q96PN7 1200 aa14.24□□□□□ -0.13
COL4A2-210ENST00000617564 VTA1Q9NP79 307 aa14.24□□□□□ -0.13
COL4A2-210ENST00000617564 MTCH2Q9Y6C9 303 aa14.24□□□□□ -0.13
COL4A2-210ENST00000617564 ALAS1P13196 640 aa14.23□□□□□ -0.13
COL4A2-210ENST00000617564 TSHZ3Q63HK5 1081 aa14.23□□□□□ -0.13
COL4A2-210ENST00000617564 MORC4Q8TE76 937 aa14.23□□□□□ -0.13
COL4A2-210ENST00000617564 NOC4LQ9BVI4 516 aaKnown RBP14.23□□□□□ -0.13
COL4A2-210ENST00000617564 CYP39A1Q9NYL5 469 aa14.23□□□□□ -0.13
COL4A2-210ENST00000617564 CFAP54Q96N23 3096 aa14.23□□□□□ -0.13
COL4A2-210ENST00000617564 GBF1Q92538 1859 aa14.23□□□□□ -0.13
COL4A2-210ENST00000617564 GRIN2DO15399 1336 aa14.22□□□□□ -0.13
COL4A2-210ENST00000617564 LOC102724159A0A0B4J2E5 919 aa14.22□□□□□ -0.13
COL4A2-210ENST00000617564 DYNC1LI2O43237 492 aaPredicted RBP14.22□□□□□ -0.13
COL4A2-210ENST00000617564 PFKMP08237 780 aa14.22□□□□□ -0.13
COL4A2-210ENST00000617564 ALADP13716 330 aa14.22□□□□□ -0.13
COL4A2-210ENST00000617564 SMPD1P17405 629 aa14.22□□□□□ -0.13
COL4A2-210ENST00000617564 MCCP23508 829 aa14.22□□□□□ -0.13
COL4A2-210ENST00000617564 PWP2Q15269 919 aaKnown RBP14.22□□□□□ -0.13
COL4A2-210ENST00000617564 ZMYM1Q5SVZ6 1142 aa14.22□□□□□ -0.13
COL4A2-210ENST00000617564 RCSD1Q6JBY9 416 aa14.22□□□□□ -0.13
COL4A2-210ENST00000617564 FBXO16Q8IX29 292 aaPredicted RBP14.22□□□□□ -0.13
COL4A2-210ENST00000617564 RPUSD2Q8IZ73 545 aaKnown RBP14.22□□□□□ -0.13
COL4A2-210ENST00000617564 PHOX2BQ99453 314 aa14.22□□□□□ -0.13
COL4A2-210ENST00000617564 PRR12Q9ULL5 1215 aa14.22□□□□□ -0.13
COL4A2-210ENST00000617564 STX8Q9UNK0 236 aa14.22□□□□□ -0.13
COL4A2-210ENST00000617564 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.22□□□□□ -0.13
COL4A2-210ENST00000617564 U3KPZ7 1027 aaPredicted RBP14.22□□□□□ -0.13
COL4A2-210ENST00000617564 UMODL1Q5DID0 1318 aa14.21□□□□□ -0.13
COL4A2-210ENST00000617564 TSPY2A6NKD2 308 aa14.21□□□□□ -0.13
COL4A2-210ENST00000617564 B4GALT4O60513 344 aa14.21□□□□□ -0.13
COL4A2-210ENST00000617564 POU3F3P20264 500 aaPredicted RBP14.21□□□□□ -0.13
COL4A2-210ENST00000617564 NOVP48745 357 aa14.21□□□□□ -0.13
COL4A2-210ENST00000617564 RRP1P56182 461 aaKnown RBP14.21□□□□□ -0.13
COL4A2-210ENST00000617564 C20orf194Q5TEA3 1177 aa14.21□□□□□ -0.13
COL4A2-210ENST00000617564 TAPT1Q6NXT6 567 aa14.21□□□□□ -0.13
COL4A2-210ENST00000617564 FSD1Q9BTV5 496 aa14.21□□□□□ -0.13
COL4A2-210ENST00000617564 WNT8AQ9H1J5 351 aa14.21□□□□□ -0.13
COL4A2-210ENST00000617564 CCPG1Q9ULG6 757 aa14.21□□□□□ -0.13
COL4A2-210ENST00000617564 PRRC2BQ5JSZ5 2229 aaKnown RBP14.21□□□□□ -0.14
COL4A2-210ENST00000617564 ICAM1P05362 532 aa14.2□□□□□ -0.14
COL4A2-210ENST00000617564 SUPT20HL2P0C7V6 817 aa14.2□□□□□ -0.14
COL4A2-210ENST00000617564 CCL23P55773 120 aa14.2□□□□□ -0.14
COL4A2-210ENST00000617564 MUM1L1Q5H9M0 696 aa14.2□□□□□ -0.14
COL4A2-210ENST00000617564 NSMFQ6X4W1 530 aa14.2□□□□□ -0.14
COL4A2-210ENST00000617564 KCTD1Q719H9 257 aa14.2□□□□□ -0.14
COL4A2-210ENST00000617564 OTOP2Q7RTS6 562 aa14.2□□□□□ -0.14
COL4A2-210ENST00000617564 GJD3Q8N144 294 aa14.2□□□□□ -0.14
COL4A2-210ENST00000617564 PI4K2BQ8TCG2 481 aa14.2□□□□□ -0.14
COL4A2-210ENST00000617564 DCAF4Q8WV16 495 aa14.2□□□□□ -0.14
COL4A2-210ENST00000617564 SEC62Q99442 399 aaKnown RBP14.2□□□□□ -0.14
COL4A2-210ENST00000617564 TRPV6Q9H1D0 765 aa14.2□□□□□ -0.14
COL4A2-210ENST00000617564 RANBP17Q9H2T7 1088 aaKnown RBP14.2□□□□□ -0.14
COL4A2-210ENST00000617564 PDGFCQ9NRA1 345 aa14.2□□□□□ -0.14
COL4A2-210ENST00000617564 POLR3EQ9NVU0 708 aa14.2□□□□□ -0.14
COL4A2-210ENST00000617564 ADD3Q9UEY8 706 aaKnown RBP14.2□□□□□ -0.14
COL4A2-210ENST00000617564 PCDHA11Q9Y5I1 949 aa14.2□□□□□ -0.14
COL4A2-210ENST00000617564 SLC4A7Q9Y6M7 1214 aa14.2□□□□□ -0.14
COL4A2-210ENST00000617564 RFXAPO00287 272 aa14.19□□□□□ -0.14
COL4A2-210ENST00000617564 RABGGTBP53611 331 aa14.19□□□□□ -0.14
COL4A2-210ENST00000617564 DUSP28Q4G0W2 176 aa14.19□□□□□ -0.14
COL4A2-210ENST00000617564 KIAA1211Q6ZU35 1233 aa14.19□□□□□ -0.14
COL4A2-210ENST00000617564 EEPD1Q7L9B9 569 aa14.19□□□□□ -0.14
COL4A2-210ENST00000617564 SP7Q8TDD2 431 aaPredicted RBP14.19□□□□□ -0.14
COL4A2-210ENST00000617564 ALDH8A1Q9H2A2 487 aaPredicted RBP14.19□□□□□ -0.14
COL4A2-210ENST00000617564 ANAPC4Q9UJX5 808 aa14.19□□□□□ -0.14
COL4A2-210ENST00000617564 PNMA2Q9UL42 364 aa14.19□□□□□ -0.14
COL4A2-210ENST00000617564 LCTP09848 1927 aa14.19□□□□□ -0.14
COL4A2-210ENST00000617564 FOXP2O15409 715 aa14.18□□□□□ -0.14
COL4A2-210ENST00000617564 ORC4O43929 436 aa14.18□□□□□ -0.14
COL4A2-210ENST00000617564 SSTR3P32745 418 aaPredicted RBP14.18□□□□□ -0.14
COL4A2-210ENST00000617564 CPT1AP50416 773 aa14.18□□□□□ -0.14
COL4A2-210ENST00000617564 ALDH5A1P51649 535 aaPredicted RBP14.18□□□□□ -0.14
COL4A2-210ENST00000617564 PSMC6P62333 389 aa14.18□□□□□ -0.14
COL4A2-210ENST00000617564 CCDC96Q2M329 555 aa14.18□□□□□ -0.14
COL4A2-210ENST00000617564 KRT40Q6A162 431 aa14.18□□□□□ -0.14
COL4A2-210ENST00000617564 BTNL9Q6UXG8 535 aa14.18□□□□□ -0.14
COL4A2-210ENST00000617564 IL17RBQ9NRM6 502 aa14.18□□□□□ -0.14
COL4A2-210ENST00000617564 TNKSO95271 1327 aa14.17□□□□□ -0.14
COL4A2-210ENST00000617564 RAD50Q92878 1312 aa14.17□□□□□ -0.14
COL4A2-210ENST00000617564 RBM47A0AV96 593 aaKnown RBP14.17□□□□□ -0.14
COL4A2-210ENST00000617564 ZBBXA8MT70 800 aa14.17□□□□□ -0.14
COL4A2-210ENST00000617564 NKRFO15226 690 aaKnown RBP eCLIP14.17□□□□□ -0.14
COL4A2-210ENST00000617564 MYOGP15173 224 aa14.17□□□□□ -0.14
COL4A2-210ENST00000617564 ATP2A2P16615 1042 aaKnown RBP14.17□□□□□ -0.14
COL4A2-210ENST00000617564 PTGS1P23219 599 aa14.17□□□□□ -0.14
COL4A2-210ENST00000617564 RFC2P35250 354 aa14.17□□□□□ -0.14
COL4A2-210ENST00000617564 SNAP25P60880 206 aa14.17□□□□□ -0.14
COL4A2-210ENST00000617564 BRDTQ58F21 947 aaPredicted RBP14.17□□□□□ -0.14
COL4A2-210ENST00000617564 SYDE2Q5VT97 1194 aa14.17□□□□□ -0.14
COL4A2-210ENST00000617564 RASGRP2Q7LDG7 609 aa14.17□□□□□ -0.14
COL4A2-210ENST00000617564 FAM178BQ8IXR5 827 aa14.17□□□□□ -0.14
COL4A2-210ENST00000617564 VWCEQ96DN2 955 aa14.17□□□□□ -0.14
COL4A2-210ENST00000617564 SCLYQ96I15 445 aa14.17□□□□□ -0.14
COL4A2-210ENST00000617564 MPHOSPH6Q99547 160 aaKnown RBP14.17□□□□□ -0.14
COL4A2-210ENST00000617564 MTG1Q9BT17 334 aaPredicted RBP14.17□□□□□ -0.14
COL4A2-210ENST00000617564 WDR11Q9BZH6 1224 aa14.17□□□□□ -0.14
COL4A2-210ENST00000617564 DDX49Q9Y6V7 483 aaKnown RBP14.17□□□□□ -0.14
COL4A2-210ENST00000617564 TRANK1O15050 2925 aa14.16□□□□□ -0.14
COL4A2-210ENST00000617564 RANBP6O60518 1105 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms