RNA–Protein interactions for RNA: ENST00000617293.4

SUSD3-205, Transcript of sushi domain containing 3, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SUSD3, Length 1,076 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-205ENST00000617293 BRF1Q92994 677 aa21.86■■□□□ 1.09
SUSD3-205ENST00000617293 RRP36Q96EU6 259 aaKnown RBP21.86■■□□□ 1.09
SUSD3-205ENST00000617293 ABHD16BQ9H3Z7 469 aa21.86■■□□□ 1.09
SUSD3-205ENST00000617293 ZSWIM6Q9HCJ5 1215 aa21.86■■□□□ 1.09
SUSD3-205ENST00000617293 DDX49Q9Y6V7 483 aaKnown RBP21.86■■□□□ 1.09
SUSD3-205ENST00000617293 LCTP09848 1927 aa21.85■■□□□ 1.09
SUSD3-205ENST00000617293 TRAF1Q13077 416 aa21.85■■□□□ 1.09
SUSD3-205ENST00000617293 DIS3LQ8TF46 1054 aaKnown RBP21.85■■□□□ 1.09
SUSD3-205ENST00000617293 PAWRQ96IZ0 340 aaKnown RBP21.85■■□□□ 1.09
SUSD3-205ENST00000617293 CYP46A1Q9Y6A2 500 aa21.85■■□□□ 1.09
SUSD3-205ENST00000617293 SEC24BO95487 1268 aa21.84■■□□□ 1.09
SUSD3-205ENST00000617293 CFBP00751 764 aa21.84■■□□□ 1.09
SUSD3-205ENST00000617293 AKR1A1P14550 325 aa21.84■■□□□ 1.09
SUSD3-205ENST00000617293 ALDH5A1P51649 535 aaPredicted RBP21.84■■□□□ 1.09
SUSD3-205ENST00000617293 RTN1Q16799 776 aa21.84■■□□□ 1.09
SUSD3-205ENST00000617293 TMTC3Q6ZXV5 915 aa21.84■■□□□ 1.09
SUSD3-205ENST00000617293 UBE2Q1Q7Z7E8 422 aa21.84■■□□□ 1.09
SUSD3-205ENST00000617293 RBM28Q9NW13 759 aaKnown RBP21.84■■□□□ 1.09
SUSD3-205ENST00000617293 SEC63Q9UGP8 760 aaKnown RBP21.84■■□□□ 1.09
SUSD3-205ENST00000617293 FRMPD3Q5JV73 1810 aa21.84■■□□□ 1.09
SUSD3-205ENST00000617293 GOLGA8AA7E2F4 631 aa21.83■■□□□ 1.09
SUSD3-205ENST00000617293 GOLGA8BA8MQT2 603 aa21.83■■□□□ 1.09
SUSD3-205ENST00000617293 MYCNP04198 464 aaPredicted RBP21.83■■□□□ 1.09
SUSD3-205ENST00000617293 EEPD1Q7L9B9 569 aa21.83■■□□□ 1.09
SUSD3-205ENST00000617293 NECAB2Q7Z6G3 386 aa21.83■■□□□ 1.09
SUSD3-205ENST00000617293 UPF3BQ9BZI7 483 aaKnown RBP21.83■■□□□ 1.09
SUSD3-205ENST00000617293 TM6SF1Q9BZW5 370 aa21.83■■□□□ 1.09
SUSD3-205ENST00000617293 MAF1Q9H063 256 aa21.83■■□□□ 1.09
SUSD3-205ENST00000617293 FAM184BQ9ULE4 1060 aa21.83■■□□□ 1.09
SUSD3-205ENST00000617293 TNRC18O15417 2968 aaPredicted RBP21.82■■□□□ 1.08
SUSD3-205ENST00000617293 RARBP10826 455 aa21.82■■□□□ 1.08
SUSD3-205ENST00000617293 MNX1P50219 401 aaPredicted RBP21.82■■□□□ 1.08
SUSD3-205ENST00000617293 FBXL16Q8N461 479 aa21.82■■□□□ 1.08
SUSD3-205ENST00000617293 DNERQ8NFT8 737 aa21.82■■□□□ 1.08
SUSD3-205ENST00000617293 SYTL5Q8TDW5 730 aaPredicted RBP21.82■■□□□ 1.08
SUSD3-205ENST00000617293 TAAR1Q96RJ0 339 aa21.82■■□□□ 1.08
SUSD3-205ENST00000617293 AGXT2Q9BYV1 514 aa21.82■■□□□ 1.08
SUSD3-205ENST00000617293 hCG_1642624A0A1W2PR95 340 aa21.81■■□□□ 1.08
SUSD3-205ENST00000617293 OPLAHO14841 1288 aa21.81■■□□□ 1.08
SUSD3-205ENST00000617293 METAP2P50579 478 aaKnown RBP eCLIP21.81■■□□□ 1.08
SUSD3-205ENST00000617293 CCDC144BQ3MJ40 725 aa21.81■■□□□ 1.08
SUSD3-205ENST00000617293 ARRDC4Q8NCT1 418 aa21.81■■□□□ 1.08
SUSD3-205ENST00000617293 LENG1Q96BZ8 264 aaPredicted RBP21.81■■□□□ 1.08
SUSD3-205ENST00000617293 MPHOSPH6Q99547 160 aaKnown RBP21.81■■□□□ 1.08
SUSD3-205ENST00000617293 KATNBL1Q9H079 304 aa21.81■■□□□ 1.08
SUSD3-205ENST00000617293 CDC27P30260 824 aa21.8■■□□□ 1.08
SUSD3-205ENST00000617293 RCAN1P53805 252 aa21.8■■□□□ 1.08
SUSD3-205ENST00000617293 GJC2Q5T442 439 aaPredicted RBP21.8■■□□□ 1.08
SUSD3-205ENST00000617293 FBXO16Q8IX29 292 aaPredicted RBP21.8■■□□□ 1.08
SUSD3-205ENST00000617293 MORC4Q8TE76 937 aa21.8■■□□□ 1.08
SUSD3-205ENST00000617293 C11orf49Q9H6J7 331 aa21.8■■□□□ 1.08
SUSD3-205ENST00000617293 XPNPEP3Q9NQH7 507 aa21.8■■□□□ 1.08
SUSD3-205ENST00000617293 COL20A1Q9P218 1284 aa21.8■■□□□ 1.08
SUSD3-205ENST00000617293 LOC102724159A0A0B4J2E5 919 aa21.79■■□□□ 1.08
SUSD3-205ENST00000617293 B4DLN1 442 aa21.79■■□□□ 1.08
SUSD3-205ENST00000617293 HOXA13P31271 388 aaPredicted RBP21.79■■□□□ 1.08
SUSD3-205ENST00000617293 ADD1P35611 737 aaKnown RBP21.79■■□□□ 1.08
SUSD3-205ENST00000617293 HSD17B4P51659 736 aa21.79■■□□□ 1.08
SUSD3-205ENST00000617293 MRPL12P52815 198 aaKnown RBP21.79■■□□□ 1.08
SUSD3-205ENST00000617293 ANAPC15P60006 121 aa21.79■■□□□ 1.08
SUSD3-205ENST00000617293 PDE4DQ08499 809 aa21.79■■□□□ 1.08
SUSD3-205ENST00000617293 PWP2Q15269 919 aaKnown RBP21.79■■□□□ 1.08
SUSD3-205ENST00000617293 C8orf34Q49A92 452 aa21.79■■□□□ 1.08
SUSD3-205ENST00000617293 DPF3Q92784 378 aa21.79■■□□□ 1.08
SUSD3-205ENST00000617293 RMDN3Q96TC7 470 aa21.79■■□□□ 1.08
SUSD3-205ENST00000617293 HTATIP2Q9BUP3 242 aa21.79■■□□□ 1.08
SUSD3-205ENST00000617293 FAM217BQ9NTX9 383 aaPredicted RBP21.79■■□□□ 1.08
SUSD3-205ENST00000617293 PDRG1Q9NUG6 133 aa21.79■■□□□ 1.08
SUSD3-205ENST00000617293 MAP3K20Q9NYL2 800 aaKnown RBP21.79■■□□□ 1.08
SUSD3-205ENST00000617293 CCDC196A0A1B0GTZ2 297 aa21.78■■□□□ 1.08
SUSD3-205ENST00000617293 GCOM1H8Y6P7 765 aaPredicted RBP21.78■■□□□ 1.08
SUSD3-205ENST00000617293 DNM1LO00429 736 aa21.78■■□□□ 1.08
SUSD3-205ENST00000617293 PGK1P00558 417 aa21.78■■□□□ 1.08
SUSD3-205ENST00000617293 POLR2MP0CAP2 368 aa21.78■■□□□ 1.08
SUSD3-205ENST00000617293 ADCYAP1R1P41586 468 aa21.78■■□□□ 1.08
SUSD3-205ENST00000617293 TOB2Q14106 344 aaPredicted RBP21.78■■□□□ 1.08
SUSD3-205ENST00000617293 PPP2R5BQ15173 497 aa21.78■■□□□ 1.08
SUSD3-205ENST00000617293 NOL8Q76FK4 1167 aaKnown RBP21.78■■□□□ 1.08
SUSD3-205ENST00000617293 SAMD3Q8N6K7 520 aa21.78■■□□□ 1.08
SUSD3-205ENST00000617293 NSUN6Q8TEA1 469 aaKnown RBP21.78■■□□□ 1.08
SUSD3-205ENST00000617293 LARP6Q9BRS8 491 aaKnown RBP21.78■■□□□ 1.08
SUSD3-205ENST00000617293 VTA1Q9NP79 307 aa21.78■■□□□ 1.08
SUSD3-205ENST00000617293 PDGFCQ9NRA1 345 aa21.78■■□□□ 1.08
SUSD3-205ENST00000617293 CNTNAP5Q8WYK1 1306 aa21.78■■□□□ 1.08
SUSD3-205ENST00000617293 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.77■■□□□ 1.08
SUSD3-205ENST00000617293 KBTBD13C9JR72 458 aa21.77■■□□□ 1.08
SUSD3-205ENST00000617293 ADCY6O43306 1168 aa21.77■■□□□ 1.08
SUSD3-205ENST00000617293 DUSP11O75319 330 aaKnown RBP21.77■■□□□ 1.08
SUSD3-205ENST00000617293 GHRHRQ02643 423 aa21.77■■□□□ 1.08
SUSD3-205ENST00000617293 TNFAIP2Q03169 654 aa21.77■■□□□ 1.08
SUSD3-205ENST00000617293 LRRC41Q15345 812 aa21.77■■□□□ 1.08
SUSD3-205ENST00000617293 ARHGEF16Q5VV41 709 aa21.77■■□□□ 1.08
SUSD3-205ENST00000617293 TAPT1Q6NXT6 567 aa21.77■■□□□ 1.08
SUSD3-205ENST00000617293 SENP6Q9GZR1 1112 aaPredicted RBP21.77■■□□□ 1.08
SUSD3-205ENST00000617293 V9GY48 417 aaPredicted RBP21.77■■□□□ 1.08
SUSD3-205ENST00000617293 EDNRBP24530 442 aa21.76■■□□□ 1.07
SUSD3-205ENST00000617293 PDIA3P30101 505 aaKnown RBP21.76■■□□□ 1.07
SUSD3-205ENST00000617293 CCT2P78371 535 aaKnown RBP21.76■■□□□ 1.07
SUSD3-205ENST00000617293 FUT2Q10981 343 aa21.76■■□□□ 1.07
SUSD3-205ENST00000617293 IQSEC1Q6DN90 963 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms