RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 TSC2P49815 1807 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 SIGLEC1Q9BZZ2 1709 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 FGF19O95750 216 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 ALDH1A3P47895 512 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 POLGP54098 1239 aaPredicted RBP3.72□□□□□ -1.81
LPP-220ENST00000617246 MYL7Q01449 175 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 GIT2Q14161 759 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 RGL4Q8IZJ4 473 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 GPR20Q99678 358 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 ECT2Q9H8V3 914 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 IFRD2Q12894 506 aaPredicted RBP3.72□□□□□ -1.81
LPP-220ENST00000617246 KYAT1Q16773 422 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 ATP6V0A1Q93050 837 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 ELP3Q9H9T3 547 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 NEMP1O14524 444 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 GNSP15586 552 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 GBP1P32455 592 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 CRKLP46109 303 aaKnown RBP3.72□□□□□ -1.81
LPP-220ENST00000617246 ELF2Q15723 593 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 AFAP1L2Q8N4X5 818 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 EFCAB3Q8N7B9 438 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 FAM212AQ96EL1 285 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 EPC1Q9H2F5 836 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 ABI3Q9P2A4 366 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 OPA1O60313 960 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 TMEM191BP0C7N4 346 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 MECOMQ03112 1051 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 TCERG1LQ5VWI1 586 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 PPFIBP1Q86W92 1011 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 RYBPQ8N488 228 aaPredicted RBP3.72□□□□□ -1.81
LPP-220ENST00000617246 PLBD2Q8NHP8 589 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 ANKRD36BP1Q96IX9 119 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 TTC25Q96NG3 672 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 TCF25Q9BQ70 676 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 NKRFO15226 690 aaKnown RBP eCLIP3.72□□□□□ -1.81
LPP-220ENST00000617246 IGSF3O75054 1194 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 PAK2Q13177 524 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 SUN3Q8TAQ9 357 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 ANO3Q9BYT9 981 aa3.72□□□□□ -1.81
LPP-220ENST00000617246 GRM8O00222 908 aa3.71□□□□□ -1.81
LPP-220ENST00000617246 PYGBP11216 843 aa3.71□□□□□ -1.81
LPP-220ENST00000617246 KPNA1P52294 538 aaPredicted RBP3.71□□□□□ -1.81
LPP-220ENST00000617246 DPH6Q7L8W6 267 aa3.71□□□□□ -1.81
LPP-220ENST00000617246 DDX27Q96GQ7 796 aaKnown RBP3.71□□□□□ -1.81
LPP-220ENST00000617246 MOSPD1Q9UJG1 213 aa3.71□□□□□ -1.81
LPP-220ENST00000617246 PPM1AP35813 382 aa3.71□□□□□ -1.81
LPP-220ENST00000617246 Q3C1V9 767 aa3.71□□□□□ -1.81
LPP-220ENST00000617246 OSBPL5Q9H0X9 879 aaPredicted RBP3.71□□□□□ -1.81
LPP-220ENST00000617246 GCOM1H8Y6P7 765 aaPredicted RBP3.71□□□□□ -1.81
LPP-220ENST00000617246 hCG_1984214I3L0E3 225 aa3.71□□□□□ -1.81
LPP-220ENST00000617246 PFKMP08237 780 aa3.71□□□□□ -1.81
LPP-220ENST00000617246 MYZAPP0CAP1 466 aa3.71□□□□□ -1.81
LPP-220ENST00000617246 IFNAR2P48551 515 aa3.71□□□□□ -1.81
LPP-220ENST00000617246 NRAPQ86VF7 1730 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 ZBTB48P10074 688 aaPredicted RBP3.71□□□□□ -1.82
LPP-220ENST00000617246 ATP2A2P16615 1042 aaKnown RBP3.71□□□□□ -1.82
LPP-220ENST00000617246 MAP7Q14244 749 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 WDR44Q5JSH3 913 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 ANKS6Q68DC2 871 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 DDX1Q92499 740 aaKnown RBP3.71□□□□□ -1.82
LPP-220ENST00000617246 SLC29A3Q9BZD2 475 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 C14orf93Q9H972 538 aaKnown RBP3.71□□□□□ -1.82
LPP-220ENST00000617246 CASP6P55212 293 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 IFI16Q16666 785 aaKnown RBP3.71□□□□□ -1.82
LPP-220ENST00000617246 TKFCQ3LXA3 575 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 CCDC40Q4G0X9 1142 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 DSTYKQ6XUX3 929 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 TMEM145Q8NBT3 493 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 DNAJC7Q99615 494 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 ZBTB21Q9ULJ3 1066 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 GOLGA6L10A6NI86 522 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 CFAP100Q494V2 611 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 SYCP2LQ5T4T6 812 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 TRMT11Q7Z4G4 463 aaKnown RBP3.71□□□□□ -1.82
LPP-220ENST00000617246 ECHDC1Q9NTX5 307 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 GAKO14976 1311 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 SOS2Q07890 1332 aaPredicted RBP3.71□□□□□ -1.82
LPP-220ENST00000617246 PDZD4Q76G19 769 aaPredicted RBP3.71□□□□□ -1.82
LPP-220ENST00000617246 ITIH5Q86UX2 942 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 SBF2Q86WG5 1849 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 DACT1Q9NYF0 836 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 HESX1Q9UBX0 185 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 SEPT9Q9UHD8 586 aaPredicted RBP3.71□□□□□ -1.82
LPP-220ENST00000617246 SH3BP1Q9Y3L3 701 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 TMCO5BA8MYB1 307 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 HNF1BP35680 557 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 PALM2Q8IXS6 379 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 C7orf61Q8IZ16 206 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 FAM117AQ9C073 453 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 NT5C3AQ9H0P0 336 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 CLRN2A0PK11 232 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 MACROD2A1Z1Q3 448 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 FAM47E-STBD1D6RA91 191 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 C1QTNF8P60827 252 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 IKBKEQ14164 716 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 CCDC127Q96BQ5 260 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 MOCOSQ96EN8 888 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 GGT7Q9UJ14 662 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 TRIM48Q8IWZ4 208 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 PUS7Q96PZ0 661 aaKnown RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms