RNA–Protein interactions for RNA: ENST00000616527.4

MALAT1-208, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-208ENST00000616527 SMIM22K7EJ46 135 aa9.03□□□□□ -0.96
MALAT1-208ENST00000616527 KINO60870 393 aaKnown RBP9.03□□□□□ -0.96
MALAT1-208ENST00000616527 CUTAO60888 179 aa9.03□□□□□ -0.96
MALAT1-208ENST00000616527 PRDM1O75626 825 aa9.03□□□□□ -0.96
MALAT1-208ENST00000616527 MYCP01106 439 aaPredicted RBP9.03□□□□□ -0.96
MALAT1-208ENST00000616527 CALML3P27482 149 aa9.03□□□□□ -0.96
MALAT1-208ENST00000616527 MMP14P50281 582 aa9.03□□□□□ -0.96
MALAT1-208ENST00000616527 KIAA2012Q0VF49 1180 aa9.03□□□□□ -0.96
MALAT1-208ENST00000616527 CLN3Q13286 438 aa9.03□□□□□ -0.96
MALAT1-208ENST00000616527 SF3A1Q15459 793 aaKnown RBP9.03□□□□□ -0.96
MALAT1-208ENST00000616527 EZH2Q15910 746 aaKnown RBP9.03□□□□□ -0.96
MALAT1-208ENST00000616527 PFKFB3Q16875 520 aaPredicted RBP9.03□□□□□ -0.96
MALAT1-208ENST00000616527 PRICKLE2Q7Z3G6 844 aa9.03□□□□□ -0.96
MALAT1-208ENST00000616527 SLC51AQ86UW1 340 aa9.03□□□□□ -0.96
MALAT1-208ENST00000616527 RAB11FIP4Q86YS3 637 aa9.03□□□□□ -0.96
MALAT1-208ENST00000616527 DIS3L2Q8IYB7 885 aaKnown RBP9.03□□□□□ -0.96
MALAT1-208ENST00000616527 FAM43AQ8N2R8 423 aa9.03□□□□□ -0.96
MALAT1-208ENST00000616527 CERS5Q8N5B7 392 aa9.03□□□□□ -0.96
MALAT1-208ENST00000616527 GPR161Q8N6U8 529 aaKnown RBP9.03□□□□□ -0.96
MALAT1-208ENST00000616527 FAM200AQ8TCP9 573 aa9.03□□□□□ -0.96
MALAT1-208ENST00000616527 TEKT1Q969V4 418 aa9.03□□□□□ -0.96
MALAT1-208ENST00000616527 AIFM3Q96NN9 605 aa9.03□□□□□ -0.96
MALAT1-208ENST00000616527 IDI2Q9BXS1 227 aa9.03□□□□□ -0.96
MALAT1-208ENST00000616527 KAT14Q9H8E8 782 aa9.03□□□□□ -0.96
MALAT1-208ENST00000616527 BRMS1Q9HCU9 246 aa9.03□□□□□ -0.96
MALAT1-208ENST00000616527 JAG2Q9Y219 1238 aa9.03□□□□□ -0.96
MALAT1-208ENST00000616527 CLIC4Q9Y696 253 aa9.03□□□□□ -0.96
MALAT1-208ENST00000616527 LAMB1P07942 1786 aa9.03□□□□□ -0.96
MALAT1-208ENST00000616527 DLEC1Q9Y238 1755 aa9.03□□□□□ -0.96
MALAT1-208ENST00000616527 CNTNAP5Q8WYK1 1306 aa9.03□□□□□ -0.96
MALAT1-208ENST00000616527 IGKV6D-41A0A0C4DH26 115 aa9.02□□□□□ -0.97
MALAT1-208ENST00000616527 WDHD1O75717 1129 aaPredicted RBP9.02□□□□□ -0.97
MALAT1-208ENST00000616527 GNRH1P01148 92 aa9.02□□□□□ -0.97
MALAT1-208ENST00000616527 TSPY3P0CV98 308 aa9.02□□□□□ -0.97
MALAT1-208ENST00000616527 TSPY8P0CW00 308 aa9.02□□□□□ -0.97
MALAT1-208ENST00000616527 TOP1P11387 765 aaKnown RBP9.02□□□□□ -0.97
MALAT1-208ENST00000616527 GUCY1A2P33402 732 aa9.02□□□□□ -0.97
MALAT1-208ENST00000616527 PLCD1P51178 756 aa9.02□□□□□ -0.97
MALAT1-208ENST00000616527 TYRO3Q06418 890 aa9.02□□□□□ -0.97
MALAT1-208ENST00000616527 SF3B2Q13435 895 aaKnown RBP9.02□□□□□ -0.97
MALAT1-208ENST00000616527 GNL2Q13823 731 aaKnown RBP9.02□□□□□ -0.97
MALAT1-208ENST00000616527 FAM47AQ5JRC9 791 aa9.02□□□□□ -0.97
MALAT1-208ENST00000616527 DACT2Q5SW24 774 aa9.02□□□□□ -0.97
MALAT1-208ENST00000616527 APOBEC3HQ6NTF7 200 aaKnown RBP9.02□□□□□ -0.97
MALAT1-208ENST00000616527 METTL16Q86W50 562 aaKnown RBP9.02□□□□□ -0.97
MALAT1-208ENST00000616527 MAPKAPK5Q8IW41 473 aa9.02□□□□□ -0.97
MALAT1-208ENST00000616527 CCDC144CPQ8IYA2 1237 aa9.02□□□□□ -0.97
MALAT1-208ENST00000616527 RTKN2Q8IZC4 609 aa9.02□□□□□ -0.97
MALAT1-208ENST00000616527 SRBD1Q8N5C6 995 aaKnown RBP9.02□□□□□ -0.97
MALAT1-208ENST00000616527 FSIP1Q8NA03 581 aa9.02□□□□□ -0.97
MALAT1-208ENST00000616527 DAGLBQ8NCG7 672 aa9.02□□□□□ -0.97
MALAT1-208ENST00000616527 TNFRSF25Q93038 417 aa9.02□□□□□ -0.97
MALAT1-208ENST00000616527 ZNF622Q969S3 477 aaKnown RBP eCLIP9.02□□□□□ -0.97
MALAT1-208ENST00000616527 CCDC17Q96LX7 622 aa9.02□□□□□ -0.97
MALAT1-208ENST00000616527 PSMD1Q99460 953 aa9.02□□□□□ -0.97
MALAT1-208ENST00000616527 SPZ1Q9BXG8 430 aa9.02□□□□□ -0.97
MALAT1-208ENST00000616527 DHX36Q9H2U1 1008 aaKnown RBP9.02□□□□□ -0.97
MALAT1-208ENST00000616527 TTF2Q9UNY4 1162 aaKnown RBP9.02□□□□□ -0.97
MALAT1-208ENST00000616527 HPSEQ9Y251 543 aa9.02□□□□□ -0.97
MALAT1-208ENST00000616527 USP17L3A6NCW0 530 aa9.01□□□□□ -0.97
MALAT1-208ENST00000616527 USP17L4A6NCW7 530 aa9.01□□□□□ -0.97
MALAT1-208ENST00000616527 FAM181BA6NEQ2 426 aa9.01□□□□□ -0.97
MALAT1-208ENST00000616527 BTBD18B2RXH4 712 aa9.01□□□□□ -0.97
MALAT1-208ENST00000616527 hCG_1984214I3L0E3 225 aa9.01□□□□□ -0.97
MALAT1-208ENST00000616527 ATP9BO43861 1147 aa9.01□□□□□ -0.97
MALAT1-208ENST00000616527 PLEKHA8P1O95397 391 aa9.01□□□□□ -0.97
MALAT1-208ENST00000616527 SCG2P13521 617 aa9.01□□□□□ -0.97
MALAT1-208ENST00000616527 KRT2P35908 639 aa9.01□□□□□ -0.97
MALAT1-208ENST00000616527 DDX60LQ5H9U9 1706 aaKnown RBP9.01□□□□□ -0.97
MALAT1-208ENST00000616527 SOGA3Q5TF21 947 aa9.01□□□□□ -0.97
MALAT1-208ENST00000616527 RESP18Q5W5W9 173 aa9.01□□□□□ -0.97
MALAT1-208ENST00000616527 SASS6Q6UVJ0 657 aa9.01□□□□□ -0.97
MALAT1-208ENST00000616527 USP17L1Q7RTZ2 530 aa9.01□□□□□ -0.97
MALAT1-208ENST00000616527 RNF135Q8IUD6 432 aa9.01□□□□□ -0.97
MALAT1-208ENST00000616527 ZNF713Q8N859 430 aaPredicted RBP9.01□□□□□ -0.97
MALAT1-208ENST00000616527 DYNLL2Q96FJ2 89 aa9.01□□□□□ -0.97
MALAT1-208ENST00000616527 FTOQ9C0B1 505 aaKnown RBP eCLIP9.01□□□□□ -0.97
MALAT1-208ENST00000616527 GRIP2Q9C0E4 1043 aa9.01□□□□□ -0.97
MALAT1-208ENST00000616527 GOLPH3LQ9H4A5 285 aa9.01□□□□□ -0.97
MALAT1-208ENST00000616527 ARHGEF10LQ9HCE6 1279 aa9.01□□□□□ -0.97
MALAT1-208ENST00000616527 GJB4Q9NTQ9 266 aa9.01□□□□□ -0.97
MALAT1-208ENST00000616527 MRVI1Q9Y6F6 885 aa9.01□□□□□ -0.97
MALAT1-208ENST00000616527 COL2A1P02458 1487 aaPredicted RBP9.01□□□□□ -0.97
MALAT1-208ENST00000616527 COL11A2P13942 1736 aaPredicted RBP9□□□□□ -0.97
MALAT1-208ENST00000616527 CARNS1A5YM72 827 aa9□□□□□ -0.97
MALAT1-208ENST00000616527 SNHG28P0DPA3 235 aa9□□□□□ -0.97
MALAT1-208ENST00000616527 CRKP46108 304 aa9□□□□□ -0.97
MALAT1-208ENST00000616527 TOB1P50616 345 aaPredicted RBP9□□□□□ -0.97
MALAT1-208ENST00000616527 CEBPZQ03701 1054 aaKnown RBP9□□□□□ -0.97
MALAT1-208ENST00000616527 USP4Q13107 963 aa9□□□□□ -0.97
MALAT1-208ENST00000616527 NPY5RQ15761 445 aa9□□□□□ -0.97
MALAT1-208ENST00000616527 STX1AQ16623 288 aa9□□□□□ -0.97
MALAT1-208ENST00000616527 MSL1Q68DK7 614 aa9□□□□□ -0.97
MALAT1-208ENST00000616527 CDC42EP5Q6NZY7 148 aa9□□□□□ -0.97
MALAT1-208ENST00000616527 SV2AQ7L0J3 742 aa9□□□□□ -0.97
MALAT1-208ENST00000616527 VWA5B2Q8N398 1253 aa9□□□□□ -0.97
MALAT1-208ENST00000616527 TTLL6Q8N841 843 aa9□□□□□ -0.97
MALAT1-208ENST00000616527 CCDC148Q8NFR7 591 aa9□□□□□ -0.97
MALAT1-208ENST00000616527 FERMT2Q96AC1 680 aa9□□□□□ -0.97
MALAT1-208ENST00000616527 TRIM44Q96DX7 344 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms