RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 STK17AQ9UEE5 414 aa14.63□□□□□ -0.07
PPP4R3B-206ENST00000616407 ZHX1Q9UKY1 873 aaPredicted RBP14.63□□□□□ -0.07
PPP4R3B-206ENST00000616407 TRIM49BA6NDI0 452 aa14.63□□□□□ -0.07
PPP4R3B-206ENST00000616407 USP17L10C9JJH3 530 aa14.63□□□□□ -0.07
PPP4R3B-206ENST00000616407 ALAS1P13196 640 aa14.63□□□□□ -0.07
PPP4R3B-206ENST00000616407 KLHL30Q0D2K2 578 aa14.63□□□□□ -0.07
PPP4R3B-206ENST00000616407 TUBB2AQ13885 445 aa14.63□□□□□ -0.07
PPP4R3B-206ENST00000616407 RBM43Q6ZSC3 357 aaKnown RBP14.63□□□□□ -0.07
PPP4R3B-206ENST00000616407 ILDR1Q86SU0 546 aaPredicted RBP14.63□□□□□ -0.07
PPP4R3B-206ENST00000616407 SCLT1Q96NL6 688 aa14.63□□□□□ -0.07
PPP4R3B-206ENST00000616407 TUBB2BQ9BVA1 445 aa14.63□□□□□ -0.07
PPP4R3B-206ENST00000616407 CNTNAP5Q8WYK1 1306 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 POTEMA6NI47 508 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 USP17L15C9J2P7 530 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 USP17L13C9JLJ4 530 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 USP17L11C9JVI0 530 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 USP17L18D6R9N7 530 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 USP17L22D6RA61 530 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 USP17L17D6RBQ6 530 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 USP17L19D6RCP7 530 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 USP17L20D6RJB6 530 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 TEX33O43247 280 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 GH2P01242 217 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 PRCPP42785 496 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 USP17L24Q0WX57 530 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 SEPT2Q15019 361 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 SEC23AQ15436 765 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 USP17L6PQ6QN14 398 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 RDH13Q8NBN7 331 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 MXD3Q9BW11 206 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 MRPL11Q9Y3B7 192 aaKnown RBP14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 MED1Q15648 1581 aaPredicted RBP14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 CCDC169A6NNP5 214 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 ADAM9Q13443 819 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 ASIC2Q16515 512 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 TCP11X2Q5H9J9 407 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 ARMCX5Q6P1M9 558 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 SELENOOQ9BVL4 669 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 RIC1Q4ADV7 1423 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 RNASE9P60153 205 aaKnown RBP14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 FMR1Q06787 632 aaKnown RBP eCLIP14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 SFMBT2Q5VUG0 894 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 USP37Q86T82 979 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 PCDHA6Q9UN73 950 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 PCDHA8Q9Y5H6 950 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 SALL1Q9NSC2 1324 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 MEIS1O00470 390 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 EXOC3O60645 756 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 MIGA2Q7L4E1 593 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 ACRBPQ8NEB7 543 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 TCHPQ9BT92 498 aa14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 LSM14BQ9BX40 385 aaKnown RBP14.62□□□□□ -0.07
PPP4R3B-206ENST00000616407 ZBTB5O15062 677 aa14.61□□□□□ -0.07
PPP4R3B-206ENST00000616407 RDXP35241 583 aaKnown RBP14.61□□□□□ -0.07
PPP4R3B-206ENST00000616407 TOB1P50616 345 aaPredicted RBP14.61□□□□□ -0.07
PPP4R3B-206ENST00000616407 VWA3BQ502W6 1294 aa14.61□□□□□ -0.07
PPP4R3B-206ENST00000616407 PTF1AQ7RTS3 328 aa14.61□□□□□ -0.07
PPP4R3B-206ENST00000616407 ARMCX3Q9UH62 379 aaPredicted RBP14.61□□□□□ -0.07
PPP4R3B-206ENST00000616407 BCS1LQ9Y276 419 aa14.61□□□□□ -0.07
PPP4R3B-206ENST00000616407 CHD2O14647 1828 aaKnown RBP14.61□□□□□ -0.07
PPP4R3B-206ENST00000616407 HAUS4Q9H6D7 363 aa14.61□□□□□ -0.07
PPP4R3B-206ENST00000616407 FAM217BQ9NTX9 383 aaPredicted RBP14.61□□□□□ -0.07
PPP4R3B-206ENST00000616407 ATP6V0A2Q9Y487 856 aa14.61□□□□□ -0.07
PPP4R3B-206ENST00000616407 SMIM22K7EJ46 135 aa14.61□□□□□ -0.07
PPP4R3B-206ENST00000616407 ECE2O60344 883 aa14.61□□□□□ -0.07
PPP4R3B-206ENST00000616407 ZBED4O75132 1171 aa14.61□□□□□ -0.07
PPP4R3B-206ENST00000616407 TUBBP07437 444 aa14.61□□□□□ -0.07
PPP4R3B-206ENST00000616407 EEF2P13639 858 aaKnown RBP14.61□□□□□ -0.07
PPP4R3B-206ENST00000616407 AOC3Q16853 763 aa14.61□□□□□ -0.07
PPP4R3B-206ENST00000616407 SYDE2Q5VT97 1194 aa14.61□□□□□ -0.07
PPP4R3B-206ENST00000616407 POTEDQ86YR6 584 aa14.61□□□□□ -0.07
PPP4R3B-206ENST00000616407 LMBR1Q8WVP7 490 aa14.61□□□□□ -0.07
PPP4R3B-206ENST00000616407 MAP3K14Q99558 947 aa14.61□□□□□ -0.07
PPP4R3B-206ENST00000616407 NBPF3Q9H094 633 aa14.61□□□□□ -0.07
PPP4R3B-206ENST00000616407 HOXA13P31271 388 aaPredicted RBP14.6□□□□□ -0.07
PPP4R3B-206ENST00000616407 TMEM179Q6ZVK1 233 aa14.6□□□□□ -0.07
PPP4R3B-206ENST00000616407 SLC35F6Q8N357 371 aa14.6□□□□□ -0.07
PPP4R3B-206ENST00000616407 CTNNBL1Q8WYA6 563 aaPredicted RBP14.6□□□□□ -0.07
PPP4R3B-206ENST00000616407 NOX5Q96PH1 765 aa14.6□□□□□ -0.07
PPP4R3B-206ENST00000616407 MTMR4Q9NYA4 1195 aa14.6□□□□□ -0.07
PPP4R3B-206ENST00000616407 BCCIPQ9P287 314 aaKnown RBP eCLIP14.6□□□□□ -0.07
PPP4R3B-206ENST00000616407 GNA14O95837 355 aa14.6□□□□□ -0.07
PPP4R3B-206ENST00000616407 GYS1P13807 737 aa14.6□□□□□ -0.07
PPP4R3B-206ENST00000616407 CETN2P41208 172 aa14.6□□□□□ -0.07
PPP4R3B-206ENST00000616407 ANKRD13CQ8N6S4 541 aa14.6□□□□□ -0.07
PPP4R3B-206ENST00000616407 ANO3Q9BYT9 981 aa14.6□□□□□ -0.07
PPP4R3B-206ENST00000616407 SAR1BQ9Y6B6 198 aa14.6□□□□□ -0.07
PPP4R3B-206ENST00000616407 XRCC5P13010 732 aaKnown RBP14.6□□□□□ -0.07
PPP4R3B-206ENST00000616407 IFFO1Q0D2I5 559 aa14.6□□□□□ -0.07
PPP4R3B-206ENST00000616407 TTBK2Q6IQ55 1244 aa14.6□□□□□ -0.07
PPP4R3B-206ENST00000616407 ADGRF4Q8IZF3 695 aa14.6□□□□□ -0.07
PPP4R3B-206ENST00000616407 SPZ1Q9BXG8 430 aa14.6□□□□□ -0.07
PPP4R3B-206ENST00000616407 VIRMAQ69YN4 1812 aaKnown RBP14.6□□□□□ -0.07
PPP4R3B-206ENST00000616407 MRC1P22897 1456 aa14.6□□□□□ -0.07
PPP4R3B-206ENST00000616407 GPR75-ASB3A0A0A6YYF3 556 aa14.59□□□□□ -0.07
PPP4R3B-206ENST00000616407 TDP2O95551 362 aa14.59□□□□□ -0.07
PPP4R3B-206ENST00000616407 POLR2FP61218 127 aaKnown RBP14.59□□□□□ -0.07
PPP4R3B-206ENST00000616407 EFCAB8A8MWE9 144 aa14.59□□□□□ -0.07
PPP4R3B-206ENST00000616407 H0YHG0 523 aa14.59□□□□□ -0.07
PPP4R3B-206ENST00000616407 PPP4CP60510 307 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms