RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 EIF3CLB5ME19 914 aaKnown RBP10.09□□□□□ -0.79
COL12A1-211ENST00000615798 RBM42Q9BTD8 480 aaKnown RBP10.09□□□□□ -0.79
COL12A1-211ENST00000615798 STAP2Q9UGK3 403 aa10.09□□□□□ -0.79
COL12A1-211ENST00000615798 EIF3DO15371 548 aaKnown RBP eCLIP10.09□□□□□ -0.79
COL12A1-211ENST00000615798 FBXO31Q5XUX0 539 aaPredicted RBP10.09□□□□□ -0.79
COL12A1-211ENST00000615798 MPRIPQ6WCQ1 1025 aa10.09□□□□□ -0.79
COL12A1-211ENST00000615798 KRT12Q99456 494 aa10.09□□□□□ -0.79
COL12A1-211ENST00000615798 USP16Q9Y5T5 823 aa10.09□□□□□ -0.79
COL12A1-211ENST00000615798 FAPQ12884 760 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 TMEM87BQ96K49 555 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 FBXL5Q9UKA1 691 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 IFIT3O14879 490 aaKnown RBP10.08□□□□□ -0.8
COL12A1-211ENST00000615798 LZTS3O60299 673 aaPredicted RBP10.08□□□□□ -0.8
COL12A1-211ENST00000615798 ATG16L1Q676U5 607 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 TRPC7Q9HCX4 862 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 SMARCA1P28370 1054 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 CHPF2Q9P2E5 772 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 SNUPNO95149 360 aaKnown RBP10.08□□□□□ -0.8
COL12A1-211ENST00000615798 CTNNA1P35221 906 aaKnown RBP10.08□□□□□ -0.8
COL12A1-211ENST00000615798 USP5P45974 858 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 ZC3H12BQ5HYM0 836 aaKnown RBP10.08□□□□□ -0.8
COL12A1-211ENST00000615798 SPOPO43791 374 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 PPP2R5DQ14738 602 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 CCDC85BQ15834 202 aaPredicted RBP10.08□□□□□ -0.8
COL12A1-211ENST00000615798 KLHL25Q9H0H3 589 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 PAG1Q9NWQ8 432 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 ZBTB43O43298 467 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 BAG3O95817 575 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 FOSL1P15407 271 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 TRIM16LQ309B1 348 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 LRRC49Q8IUZ0 686 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 TEKT4Q8WW24 435 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 ADGRB3O60242 1522 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 ZC3H13Q5T200 1668 aaKnown RBP10.08□□□□□ -0.8
COL12A1-211ENST00000615798 THAP12O43422 761 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 RCN2Q14257 317 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 PLD3Q8IV08 490 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 NLRP4Q96MN2 994 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 STOML1Q9UBI4 398 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 TRAF3IP3Q9Y228 551 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 FAM83GA6ND36 823 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 ENO4A6NNW6 628 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 NANOGNBQ7Z5D8 188 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 MAIP1Q8WWC4 291 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 ZNF263O14978 683 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 MTHFSDQ2M296 383 aaKnown RBP10.08□□□□□ -0.8
COL12A1-211ENST00000615798 OLFML2BQ68BL8 750 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 CLEC17AQ6ZS10 378 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 NUTM2AQ8IVF1 878 aaPredicted RBP10.08□□□□□ -0.8
COL12A1-211ENST00000615798 BRF1Q92994 677 aa10.08□□□□□ -0.8
COL12A1-211ENST00000615798 SERPINB2P05120 415 aa10.07□□□□□ -0.8
COL12A1-211ENST00000615798 CNPY2Q9Y2B0 182 aa10.07□□□□□ -0.8
COL12A1-211ENST00000615798 RNF113AO15541 343 aaKnown RBP10.07□□□□□ -0.8
COL12A1-211ENST00000615798 GSTA1P08263 222 aa10.07□□□□□ -0.8
COL12A1-211ENST00000615798 GSTA2P09210 222 aa10.07□□□□□ -0.8
COL12A1-211ENST00000615798 SFSWAPQ12872 951 aaKnown RBP10.07□□□□□ -0.8
COL12A1-211ENST00000615798 HP1BP3Q5SSJ5 553 aaPredicted RBP10.07□□□□□ -0.8
COL12A1-211ENST00000615798 ORC4O43929 436 aa10.07□□□□□ -0.8
COL12A1-211ENST00000615798 KHDRBS2Q5VWX1 349 aaKnown RBP10.07□□□□□ -0.8
COL12A1-211ENST00000615798 THAP11Q96EK4 314 aa10.07□□□□□ -0.8
COL12A1-211ENST00000615798 MLPHQ9BV36 600 aaPredicted RBP10.07□□□□□ -0.8
COL12A1-211ENST00000615798 MRPL40Q9NQ50 206 aaKnown RBP10.07□□□□□ -0.8
COL12A1-211ENST00000615798 GUCY1B2O75343 617 aa10.07□□□□□ -0.8
COL12A1-211ENST00000615798 TEDDM1Q5T9Z0 273 aa10.07□□□□□ -0.8
COL12A1-211ENST00000615798 SH3BP5LQ7L8J4 393 aa10.07□□□□□ -0.8
COL12A1-211ENST00000615798 MYLK4Q86YV6 388 aaPredicted RBP10.07□□□□□ -0.8
COL12A1-211ENST00000615798 SSH3Q8TE77 659 aa10.07□□□□□ -0.8
COL12A1-211ENST00000615798 GSDMAQ96QA5 445 aa10.07□□□□□ -0.8
COL12A1-211ENST00000615798 CCDC8Q9H0W5 538 aaPredicted RBP10.07□□□□□ -0.8
COL12A1-211ENST00000615798 SPINK5Q9NQ38 1064 aaPredicted RBP10.07□□□□□ -0.8
COL12A1-211ENST00000615798 LRPAP1P30533 357 aa10.07□□□□□ -0.8
COL12A1-211ENST00000615798 SCRN3Q0VDG4 424 aa10.07□□□□□ -0.8
COL12A1-211ENST00000615798 BFSP2Q13515 415 aa10.07□□□□□ -0.8
COL12A1-211ENST00000615798 TMEM67Q5HYA8 995 aa10.07□□□□□ -0.8
COL12A1-211ENST00000615798 PLEKHM3Q6ZWE6 761 aa10.07□□□□□ -0.8
COL12A1-211ENST00000615798 SIX5Q8N196 739 aa10.07□□□□□ -0.8
COL12A1-211ENST00000615798 CLSTN2Q9H4D0 955 aa10.07□□□□□ -0.8
COL12A1-211ENST00000615798 TRIM71Q2Q1W2 868 aaKnown RBP10.07□□□□□ -0.8
COL12A1-211ENST00000615798 TMEM259Q4ZIN3 620 aa10.07□□□□□ -0.8
COL12A1-211ENST00000615798 DEPDC1Q5TB30 811 aa10.07□□□□□ -0.8
COL12A1-211ENST00000615798 NCAPD2Q15021 1401 aa10.07□□□□□ -0.8
COL12A1-211ENST00000615798 AP1S2P56377 157 aa10.07□□□□□ -0.8
COL12A1-211ENST00000615798 SCYL1Q96KG9 808 aa10.07□□□□□ -0.8
COL12A1-211ENST00000615798 PLEKHF1Q96S99 279 aa10.07□□□□□ -0.8
COL12A1-211ENST00000615798 IMPG2Q9BZV3 1241 aa10.07□□□□□ -0.8
COL12A1-211ENST00000615798 MORC2Q9Y6X9 1032 aaPredicted RBP10.07□□□□□ -0.8
COL12A1-211ENST00000615798 SUPT3HO75486 399 aa10.07□□□□□ -0.8
COL12A1-211ENST00000615798 RPS6KB1P23443 525 aa10.07□□□□□ -0.8
COL12A1-211ENST00000615798 CCDC103Q8IW40 242 aa10.07□□□□□ -0.8
COL12A1-211ENST00000615798 PARP9Q8IXQ6 854 aa10.07□□□□□ -0.8
COL12A1-211ENST00000615798 ATP6V1HQ9UI12 483 aa10.07□□□□□ -0.8
COL12A1-211ENST00000615798 IQSEC3Q9UPP2 1182 aaPredicted RBP10.07□□□□□ -0.8
COL12A1-211ENST00000615798 A0A0B4J269 797 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 TUBB3Q13509 450 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 DNAJC25Q9H1X3 360 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 PDE11AQ9HCR9 933 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 NOC2LQ9Y3T9 749 aaKnown RBP10.06□□□□□ -0.8
COL12A1-211ENST00000615798 CHD1O14646 1710 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 CFAP73A6NFT4 308 aa10.06□□□□□ -0.8
COL12A1-211ENST00000615798 EFCAB8A8MWE9 144 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms