RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 PCDHA8Q9Y5H6 950 aa15.56■□□□□ 0.08
SSBP2-220ENST00000615665 SHTN1A0MZ66 631 aa15.56■□□□□ 0.08
SSBP2-220ENST00000615665 CLCN6P51797 869 aa15.56■□□□□ 0.08
SSBP2-220ENST00000615665 NYAP1Q6ZVC0 841 aa15.56■□□□□ 0.08
SSBP2-220ENST00000615665 FLAD1Q8NFF5 587 aa15.56■□□□□ 0.08
SSBP2-220ENST00000615665 TRIM58Q8NG06 486 aa15.56■□□□□ 0.08
SSBP2-220ENST00000615665 RPGRIP1Q96KN7 1286 aa15.56■□□□□ 0.08
SSBP2-220ENST00000615665 DBNDD1Q9H9R9 158 aa15.56■□□□□ 0.08
SSBP2-220ENST00000615665 PNMA6FA0A0J9YX94 578 aa15.55■□□□□ 0.08
SSBP2-220ENST00000615665 KIAA0754O94854 1291 aa15.55■□□□□ 0.08
SSBP2-220ENST00000615665 NDUFA10O95299 355 aa15.55■□□□□ 0.08
SSBP2-220ENST00000615665 KLHL30Q0D2K2 578 aa15.55■□□□□ 0.08
SSBP2-220ENST00000615665 SMC1AQ14683 1233 aaKnown RBP15.55■□□□□ 0.08
SSBP2-220ENST00000615665 NCAPHQ15003 741 aa15.55■□□□□ 0.08
SSBP2-220ENST00000615665 TXNRD1Q16881 649 aa15.55■□□□□ 0.08
SSBP2-220ENST00000615665 PSMB7Q99436 277 aa15.55■□□□□ 0.08
SSBP2-220ENST00000615665 LSM14BQ9BX40 385 aaKnown RBP15.55■□□□□ 0.08
SSBP2-220ENST00000615665 CAPN2P17655 700 aa15.55■□□□□ 0.08
SSBP2-220ENST00000615665 PLS1Q14651 629 aa15.55■□□□□ 0.08
SSBP2-220ENST00000615665 ABHD10Q9NUJ1 306 aa15.55■□□□□ 0.08
SSBP2-220ENST00000615665 LGALS16A8MUM7 142 aa15.55■□□□□ 0.08
SSBP2-220ENST00000615665 ATRNO75882 1429 aa15.55■□□□□ 0.08
SSBP2-220ENST00000615665 VAV2P52735 878 aa15.55■□□□□ 0.08
SSBP2-220ENST00000615665 MRPL44Q9H9J2 332 aaKnown RBP15.55■□□□□ 0.08
SSBP2-220ENST00000615665 CTIFO43310 598 aaKnown RBP15.55■□□□□ 0.08
SSBP2-220ENST00000615665 GCNT3O95395 438 aa15.55■□□□□ 0.08
SSBP2-220ENST00000615665 LRRC41Q15345 812 aa15.55■□□□□ 0.08
SSBP2-220ENST00000615665 ABCB5Q2M3G0 1257 aa15.55■□□□□ 0.08
SSBP2-220ENST00000615665 MAATS1Q7Z4T9 603 aa15.55■□□□□ 0.08
SSBP2-220ENST00000615665 SUPT20HQ8NEM7 779 aa15.55■□□□□ 0.08
SSBP2-220ENST00000615665 SPZ1Q9BXG8 430 aa15.55■□□□□ 0.08
SSBP2-220ENST00000615665 AMNQ9BXJ7 453 aa15.55■□□□□ 0.08
SSBP2-220ENST00000615665 KANSL2Q9H9L4 492 aa15.55■□□□□ 0.08
SSBP2-220ENST00000615665 PKD2L1Q9P0L9 805 aa15.55■□□□□ 0.08
SSBP2-220ENST00000615665 FRMD4BQ9Y2L6 1034 aa15.55■□□□□ 0.08
SSBP2-220ENST00000615665 ZBED6P86452 979 aa15.54■□□□□ 0.08
SSBP2-220ENST00000615665 MAN2A1Q16706 1144 aa15.54■□□□□ 0.08
SSBP2-220ENST00000615665 PRR5LQ6MZQ0 368 aa15.54■□□□□ 0.08
SSBP2-220ENST00000615665 PARP4Q9UKK3 1724 aaKnown RBP15.54■□□□□ 0.08
SSBP2-220ENST00000615665 PPIP5K2O43314 1243 aa15.54■□□□□ 0.08
SSBP2-220ENST00000615665 SEC31AO94979 1220 aaKnown RBP15.54■□□□□ 0.08
SSBP2-220ENST00000615665 NBPF11Q86T75 865 aa15.54■□□□□ 0.08
SSBP2-220ENST00000615665 ADGRG1Q9Y653 693 aa15.54■□□□□ 0.08
SSBP2-220ENST00000615665 RIC8AQ9NPQ8 531 aa15.54■□□□□ 0.08
SSBP2-220ENST00000615665 FOXP2O15409 715 aa15.53■□□□□ 0.08
SSBP2-220ENST00000615665 NR1I3Q14994 352 aa15.53■□□□□ 0.08
SSBP2-220ENST00000615665 ZBTB21Q9ULJ3 1066 aa15.53■□□□□ 0.08
SSBP2-220ENST00000615665 ZNF142P52746 1687 aaPredicted RBP15.53■□□□□ 0.08
SSBP2-220ENST00000615665 ENC1O14682 589 aa15.53■□□□□ 0.08
SSBP2-220ENST00000615665 OPA1O60313 960 aa15.53■□□□□ 0.08
SSBP2-220ENST00000615665 NPR1P16066 1061 aa15.53■□□□□ 0.08
SSBP2-220ENST00000615665 C8orf74Q6P047 294 aa15.53■□□□□ 0.08
SSBP2-220ENST00000615665 CCDC174Q6PII3 467 aa15.53■□□□□ 0.08
SSBP2-220ENST00000615665 ANKRD7Q92527 254 aa15.53■□□□□ 0.08
SSBP2-220ENST00000615665 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.53■□□□□ 0.08
SSBP2-220ENST00000615665 TMEM260Q9NX78 707 aa15.53■□□□□ 0.08
SSBP2-220ENST00000615665 POTEJP0CG39 1038 aa15.53■□□□□ 0.08
SSBP2-220ENST00000615665 RASA1P20936 1047 aa15.53■□□□□ 0.08
SSBP2-220ENST00000615665 TNNC1P63316 161 aa15.53■□□□□ 0.08
SSBP2-220ENST00000615665 IFFO1Q0D2I5 559 aa15.53■□□□□ 0.08
SSBP2-220ENST00000615665 MTF1Q14872 753 aa15.53■□□□□ 0.08
SSBP2-220ENST00000615665 PKN1Q16512 942 aa15.53■□□□□ 0.08
SSBP2-220ENST00000615665 KRT27Q7Z3Y8 459 aa15.53■□□□□ 0.08
SSBP2-220ENST00000615665 MYCT1Q8N699 235 aa15.53■□□□□ 0.08
SSBP2-220ENST00000615665 TC2NQ8N9U0 490 aa15.53■□□□□ 0.08
SSBP2-220ENST00000615665 DHX36Q9H2U1 1008 aaKnown RBP15.53■□□□□ 0.08
SSBP2-220ENST00000615665 ADD3Q9UEY8 706 aaKnown RBP15.53■□□□□ 0.08
SSBP2-220ENST00000615665 FOSP01100 380 aaPredicted RBP15.53■□□□□ 0.08
SSBP2-220ENST00000615665 LARGE2Q8N3Y3 721 aa15.53■□□□□ 0.08
SSBP2-220ENST00000615665 IFT81Q8WYA0 676 aa15.53■□□□□ 0.08
SSBP2-220ENST00000615665 GOPCQ9HD26 462 aa15.53■□□□□ 0.08
SSBP2-220ENST00000615665 FLT1P17948 1338 aa15.52■□□□□ 0.08
SSBP2-220ENST00000615665 ARHGEF35A5YM69 484 aa15.52■□□□□ 0.08
SSBP2-220ENST00000615665 PRPHP41219 470 aa15.52■□□□□ 0.08
SSBP2-220ENST00000615665 FKBP3Q00688 224 aaKnown RBP15.52■□□□□ 0.08
SSBP2-220ENST00000615665 DLGAP5Q15398 846 aa15.52■□□□□ 0.08
SSBP2-220ENST00000615665 POTEDQ86YR6 584 aa15.52■□□□□ 0.08
SSBP2-220ENST00000615665 CCSER1Q9C0I3 900 aa15.52■□□□□ 0.08
SSBP2-220ENST00000615665 ARMCX3Q9UH62 379 aaPredicted RBP15.52■□□□□ 0.08
SSBP2-220ENST00000615665 DDX41Q9UJV9 622 aaKnown RBP15.52■□□□□ 0.08
SSBP2-220ENST00000615665 SSR1P43307 286 aaKnown RBP15.52■□□□□ 0.07
SSBP2-220ENST00000615665 ADAM9Q13443 819 aa15.52■□□□□ 0.07
SSBP2-220ENST00000615665 TXNRD3Q86VQ6 643 aa15.52■□□□□ 0.07
SSBP2-220ENST00000615665 TPH2Q8IWU9 490 aa15.52■□□□□ 0.07
SSBP2-220ENST00000615665 GOLGA6L10A0A0M3HER8 536 aa15.52■□□□□ 0.07
SSBP2-220ENST00000615665 POTEMA6NI47 508 aa15.52■□□□□ 0.07
SSBP2-220ENST00000615665 ORC2Q13416 577 aaPredicted RBP15.52■□□□□ 0.07
SSBP2-220ENST00000615665 KCNB1Q14721 858 aa15.52■□□□□ 0.07
SSBP2-220ENST00000615665 KIFC2Q96AC6 838 aa15.52■□□□□ 0.07
SSBP2-220ENST00000615665 GJD4Q96KN9 370 aaPredicted RBP15.52■□□□□ 0.07
SSBP2-220ENST00000615665 PARD6BQ9BYG5 372 aa15.52■□□□□ 0.07
SSBP2-220ENST00000615665 BCCIPQ9P287 314 aaKnown RBP eCLIP15.52■□□□□ 0.07
SSBP2-220ENST00000615665 LIMA1Q9UHB6 759 aaKnown RBP15.52■□□□□ 0.07
SSBP2-220ENST00000615665 ATP8B1O43520 1251 aa15.51■□□□□ 0.07
SSBP2-220ENST00000615665 POLR2FP61218 127 aaKnown RBP15.51■□□□□ 0.07
SSBP2-220ENST00000615665 UNC13DQ70J99 1090 aa15.51■□□□□ 0.07
SSBP2-220ENST00000615665 PI4KBQ9UBF8 816 aa15.51■□□□□ 0.07
SSBP2-220ENST00000615665 XRCC5P13010 732 aaKnown RBP15.51■□□□□ 0.07
SSBP2-220ENST00000615665 CCDC170Q8IYT3 715 aa15.51■□□□□ 0.07
SSBP2-220ENST00000615665 TBC1D16Q8TBP0 767 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms