RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 ELF1P32519 619 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 NLRP12P59046 1061 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 THEM5Q8N1Q8 247 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 PLIN2Q99541 437 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 SNX25Q9H3E2 840 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 URI1O94763 535 aaPredicted RBP10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 ALDH3A1P30838 453 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 DYNLL1P63167 89 aaKnown RBP10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 GSDMBQ8TAX9 411 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 TBC1D16Q8TBP0 767 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 SUGCTQ9HAC7 445 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 SERPINA10Q9UK55 444 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 WDR46O15213 610 aaKnown RBP10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 RASGRF1Q13972 1273 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 TAF1CQ15572 869 aaPredicted RBP10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 SLC9C1Q4G0N8 1177 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 ODF2LQ9ULJ1 636 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 LRRIQ4A6NIV6 560 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 TMEM110-MUSTN1A8MSY1 372 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 MED7O43513 233 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 IGBP1P78318 339 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 KRT76Q01546 638 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 PLCB3Q01970 1234 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 HADHQ16836 314 aaKnown RBP10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 MICALCLQ6ZW33 695 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 MIGA2Q7L4E1 593 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 TRMT2AQ8IZ69 625 aaKnown RBP10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 LCORLQ8N3X6 602 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 PARP2Q9UGN5 583 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 TNNQ9UQP3 1299 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 PPLO60437 1756 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 ERCC5P28715 1186 aaPredicted RBP10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 KCNQ4P56696 695 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 CYP26C1Q6V0L0 522 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 AFAP1L2Q8N4X5 818 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 CCDC26Q8TAB7 109 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 CCDC102AQ96A19 550 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 TRERF1Q96PN7 1200 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 PFASO15067 1338 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 VWDEQ8N2E2 1590 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 HSF2BPO75031 334 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 DPEP1P16444 411 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 ARMCX5Q6P1M9 558 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 DCUN1D2Q6PH85 259 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 ZNF512BQ96KM6 892 aaPredicted RBP10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 UBN2Q6ZU65 1347 aa10.74□□□□□ -0.69
TNFRSF9-204ENST00000615230 A0A0D9SFI3 127 aa10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 GTPBP6O43824 516 aaPredicted RBP10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 SYT1P21579 422 aa10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 ATP5DP30049 168 aa10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 LIFRP42702 1097 aa10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 KCTD1Q719H9 257 aa10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 KMT5AQ9NQR1 393 aa10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 STAM2O75886 525 aa10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 XRCC5P13010 732 aaKnown RBP10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 CIITAP33076 1130 aa10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 PHKA2P46019 1235 aa10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 ZSCAN23Q3MJ62 389 aa10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 CROCCP2Q86T23 111 aa10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 ANKRD13AQ8IZ07 590 aa10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 TTC39CQ8N584 583 aa10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 CTAGE9A4FU28 777 aa10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 KIF28PB7ZC32 967 aa10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 AKR1B15C9JRZ8 316 aaPredicted RBP10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 CD19P15391 556 aa10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 FAM193AP78312 1265 aa10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 TYRO3Q06418 890 aa10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 PSMD2Q13200 908 aa10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 SH3RF3Q8TEJ3 882 aaPredicted RBP10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 CLSTN2Q9H4D0 955 aa10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 A0A0G2JLW4 131 aa10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 ADCY5O95622 1261 aa10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 GH2P01242 217 aa10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 GJC1P36383 396 aa10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 GOLGA8FQ08AF8 430 aa10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 GOLGA8DPQ0D2H9 430 aa10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 SCARF1Q14162 830 aa10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 ALX1Q15699 326 aa10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 ISM2Q6H9L7 571 aa10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 RAB3IL1Q8TBN0 382 aa10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 PHKBQ93100 1093 aa10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 ARID3AQ99856 593 aa10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 NSRP1Q9H0G5 558 aaKnown RBP10.73□□□□□ -0.69
TNFRSF9-204ENST00000615230 EIF3CLB5ME19 914 aaKnown RBP10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 CAPN9O14815 690 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 PPFIA3O75145 1194 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 ACTN1P12814 892 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 MAEAQ7L5Y9 396 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 ZSCAN30Q86W11 494 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 SAMD3Q8N6K7 520 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 PRPF38AQ8NAV1 312 aaKnown RBP10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 MAP4K1Q92918 833 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 EIF3CQ99613 913 aaKnown RBP10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 MYL10Q9BUA6 226 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 SPOPO43791 374 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 DONSONQ9NYP3 566 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 CTAGE15A4D2H0 777 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 SH2B2O14492 632 aaPredicted RBP10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 ZBTB5O15062 677 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms