RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 NYXQ9GZU5 481 aa13.9□□□□□ -0.18
MSH6-213ENST00000614496 TLDC2A0PJX2 215 aa13.9□□□□□ -0.18
MSH6-213ENST00000614496 INPP5BP32019 993 aa13.9□□□□□ -0.18
MSH6-213ENST00000614496 CDKAL1Q5VV42 579 aa13.9□□□□□ -0.18
MSH6-213ENST00000614496 PCDHA13Q9Y5I0 950 aa13.9□□□□□ -0.18
MSH6-213ENST00000614496 TOPAZ1Q8N9V7 1692 aa13.9□□□□□ -0.18
MSH6-213ENST00000614496 ZNF804BA4D1E1 1349 aa13.9□□□□□ -0.18
MSH6-213ENST00000614496 PPP1R2P41236 205 aa13.9□□□□□ -0.18
MSH6-213ENST00000614496 ADCY7P51828 1080 aa13.9□□□□□ -0.18
MSH6-213ENST00000614496 ANKRD40Q6AI12 368 aa13.9□□□□□ -0.18
MSH6-213ENST00000614496 NFRKBQ6P4R8 1299 aa13.9□□□□□ -0.18
MSH6-213ENST00000614496 KANSL2Q9H9L4 492 aa13.9□□□□□ -0.18
MSH6-213ENST00000614496 UFL1O94874 794 aa13.9□□□□□ -0.19
MSH6-213ENST00000614496 PCP11498 1178 aaKnown RBP13.9□□□□□ -0.19
MSH6-213ENST00000614496 TCP1P17987 556 aaKnown RBP13.9□□□□□ -0.19
MSH6-213ENST00000614496 FGFR2P21802 821 aa13.9□□□□□ -0.19
MSH6-213ENST00000614496 SEC23AQ15436 765 aa13.9□□□□□ -0.19
MSH6-213ENST00000614496 MICALCLQ6ZW33 695 aa13.9□□□□□ -0.19
MSH6-213ENST00000614496 ADSSL1Q8N142 457 aa13.9□□□□□ -0.19
MSH6-213ENST00000614496 WDR66Q8TBY9 1149 aa13.9□□□□□ -0.19
MSH6-213ENST00000614496 ZNF219Q9P2Y4 722 aaPredicted RBP13.9□□□□□ -0.19
MSH6-213ENST00000614496 L1RE1Q9UN81 338 aa13.9□□□□□ -0.19
MSH6-213ENST00000614496 FAM237AA0A1B0GTK4 181 aa13.89□□□□□ -0.19
MSH6-213ENST00000614496 RCAN1P53805 252 aa13.89□□□□□ -0.19
MSH6-213ENST00000614496 TNNC1P63316 161 aa13.89□□□□□ -0.19
MSH6-213ENST00000614496 VGLL2Q8N8G2 317 aa13.89□□□□□ -0.19
MSH6-213ENST00000614496 NDST4Q9H3R1 872 aa13.89□□□□□ -0.19
MSH6-213ENST00000614496 CNTNAP5Q8WYK1 1306 aa13.89□□□□□ -0.19
MSH6-213ENST00000614496 LRRIQ3A6PVS8 624 aaPredicted RBP13.89□□□□□ -0.19
MSH6-213ENST00000614496 ASIC2Q16515 512 aa13.89□□□□□ -0.19
MSH6-213ENST00000614496 KIAA0753Q2KHM9 967 aa13.89□□□□□ -0.19
MSH6-213ENST00000614496 CCDC65Q8IXS2 484 aa13.89□□□□□ -0.19
MSH6-213ENST00000614496 KRT12Q99456 494 aa13.89□□□□□ -0.19
MSH6-213ENST00000614496 MTA3Q9BTC8 594 aa13.89□□□□□ -0.19
MSH6-213ENST00000614496 EPB41L5Q9HCM4 733 aa13.89□□□□□ -0.19
MSH6-213ENST00000614496 ESYT3A0FGR9 886 aa13.89□□□□□ -0.19
MSH6-213ENST00000614496 PPP1R12BO60237 982 aaPredicted RBP13.89□□□□□ -0.19
MSH6-213ENST00000614496 STK4Q13043 487 aa13.89□□□□□ -0.19
MSH6-213ENST00000614496 NKX1-1Q15270 411 aaPredicted RBP13.89□□□□□ -0.19
MSH6-213ENST00000614496 NT5DC1Q5TFE4 455 aa13.89□□□□□ -0.19
MSH6-213ENST00000614496 MYOCDQ8IZQ8 938 aa13.89□□□□□ -0.19
MSH6-213ENST00000614496 SRP68Q9UHB9 627 aaKnown RBP13.89□□□□□ -0.19
MSH6-213ENST00000614496 FEZ2Q9UHY8 353 aaPredicted RBP13.89□□□□□ -0.19
MSH6-213ENST00000614496 JRKLQ9Y4A0 524 aa13.89□□□□□ -0.19
MSH6-213ENST00000614496 RGPD2P0DJD1 1756 aa13.88□□□□□ -0.19
MSH6-213ENST00000614496 KCNK3O14649 394 aa13.88□□□□□ -0.19
MSH6-213ENST00000614496 ELOA2Q8IYF1 753 aaPredicted RBP13.88□□□□□ -0.19
MSH6-213ENST00000614496 SH3RF3Q8TEJ3 882 aaPredicted RBP13.88□□□□□ -0.19
MSH6-213ENST00000614496 LARP4BQ92615 738 aaKnown RBP13.88□□□□□ -0.19
MSH6-213ENST00000614496 TBCAO75347 108 aaKnown RBP13.88□□□□□ -0.19
MSH6-213ENST00000614496 EVX2Q03828 476 aa13.88□□□□□ -0.19
MSH6-213ENST00000614496 CCDC170Q8IYT3 715 aa13.88□□□□□ -0.19
MSH6-213ENST00000614496 NGLY1Q96IV0 654 aa13.88□□□□□ -0.19
MSH6-213ENST00000614496 LACRTQ9GZZ8 138 aa13.88□□□□□ -0.19
MSH6-213ENST00000614496 PPANQ9NQ55 473 aaKnown RBP13.88□□□□□ -0.19
MSH6-213ENST00000614496 CAPN11Q9UMQ6 739 aa13.88□□□□□ -0.19
MSH6-213ENST00000614496 TACC3Q9Y6A5 838 aa13.88□□□□□ -0.19
MSH6-213ENST00000614496 EIF3CLB5ME19 914 aaKnown RBP13.88□□□□□ -0.19
MSH6-213ENST00000614496 KLRK1P26718 216 aa13.88□□□□□ -0.19
MSH6-213ENST00000614496 PMS1P54277 932 aaKnown RBP13.88□□□□□ -0.19
MSH6-213ENST00000614496 PAK2Q13177 524 aa13.88□□□□□ -0.19
MSH6-213ENST00000614496 SLF2Q8IX21 1173 aa13.88□□□□□ -0.19
MSH6-213ENST00000614496 EIF3CQ99613 913 aaKnown RBP13.88□□□□□ -0.19
MSH6-213ENST00000614496 TMEM260Q9NX78 707 aa13.88□□□□□ -0.19
MSH6-213ENST00000614496 RTCBQ9Y3I0 505 aaKnown RBP13.88□□□□□ -0.19
MSH6-213ENST00000614496 ITIH6Q6UXX5 1313 aa13.88□□□□□ -0.19
MSH6-213ENST00000614496 LRRC37A3O60309 1634 aa13.88□□□□□ -0.19
MSH6-213ENST00000614496 POTEMA6NI47 508 aa13.87□□□□□ -0.19
MSH6-213ENST00000614496 TMEM110-MUSTN1A8MSY1 372 aa13.87□□□□□ -0.19
MSH6-213ENST00000614496 RNF225M0QZC1 329 aaPredicted RBP13.87□□□□□ -0.19
MSH6-213ENST00000614496 PLEKP08567 350 aaPredicted RBP13.87□□□□□ -0.19
MSH6-213ENST00000614496 PLS1Q14651 629 aa13.87□□□□□ -0.19
MSH6-213ENST00000614496 CEP85LQ5SZL2 805 aa13.87□□□□□ -0.19
MSH6-213ENST00000614496 TMC4Q7Z404 712 aa13.87□□□□□ -0.19
MSH6-213ENST00000614496 SRLQ86TD4 932 aa13.87□□□□□ -0.19
MSH6-213ENST00000614496 RETREG2Q8NC44 543 aa13.87□□□□□ -0.19
MSH6-213ENST00000614496 TMEM47Q9BQJ4 181 aa13.87□□□□□ -0.19
MSH6-213ENST00000614496 BSDC1Q9NW68 430 aaPredicted RBP13.87□□□□□ -0.19
MSH6-213ENST00000614496 EHD2Q9NZN4 543 aa13.87□□□□□ -0.19
MSH6-213ENST00000614496 CETN3O15182 167 aa13.87□□□□□ -0.19
MSH6-213ENST00000614496 HEXIM1O94992 359 aaKnown RBP13.87□□□□□ -0.19
MSH6-213ENST00000614496 BTDP43251 543 aa13.87□□□□□ -0.19
MSH6-213ENST00000614496 COG1Q8WTW3 980 aa13.87□□□□□ -0.19
MSH6-213ENST00000614496 MED15Q96RN5 788 aa13.87□□□□□ -0.19
MSH6-213ENST00000614496 LRRC1Q9BTT6 524 aa13.87□□□□□ -0.19
MSH6-213ENST00000614496 RIC1Q4ADV7 1423 aa13.87□□□□□ -0.19
MSH6-213ENST00000614496 LRRC53A6NM62 1247 aa13.87□□□□□ -0.19
MSH6-213ENST00000614496 GFPT1Q06210 699 aaPredicted RBP13.87□□□□□ -0.19
MSH6-213ENST00000614496 RPS6KA1Q15418 735 aa13.87□□□□□ -0.19
MSH6-213ENST00000614496 MAN2A1Q16706 1144 aa13.87□□□□□ -0.19
MSH6-213ENST00000614496 TBC1D5Q92609 795 aa13.87□□□□□ -0.19
MSH6-213ENST00000614496 NSUN4Q96CB9 384 aaKnown RBP13.87□□□□□ -0.19
MSH6-213ENST00000614496 FANCGO15287 622 aa13.86□□□□□ -0.19
MSH6-213ENST00000614496 VWA3BQ502W6 1294 aa13.86□□□□□ -0.19
MSH6-213ENST00000614496 FAM26FQ5R3K3 315 aa13.86□□□□□ -0.19
MSH6-213ENST00000614496 ADAT2Q7Z6V5 191 aaKnown RBP13.86□□□□□ -0.19
MSH6-213ENST00000614496 FAM184BQ9ULE4 1060 aa13.86□□□□□ -0.19
MSH6-213ENST00000614496 PPFIA4O75335 1185 aa13.86□□□□□ -0.19
MSH6-213ENST00000614496 MRPL12P52815 198 aaKnown RBP13.86□□□□□ -0.19
MSH6-213ENST00000614496 PDCLQ13371 301 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms