RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 SH2D4BQ5SQS7 431 aa3.4□□□□□ -1.87
CBWD3-209ENST00000614377 SWSAP1Q6NVH7 229 aa3.4□□□□□ -1.87
CBWD3-209ENST00000614377 GBP6Q6ZN66 633 aa3.4□□□□□ -1.87
CBWD3-209ENST00000614377 USP51Q70EK9 711 aa3.4□□□□□ -1.87
CBWD3-209ENST00000614377 TMC4Q7Z404 712 aa3.4□□□□□ -1.87
CBWD3-209ENST00000614377 TRIM22Q8IYM9 498 aa3.4□□□□□ -1.87
CBWD3-209ENST00000614377 LSMEM2Q8N112 164 aa3.4□□□□□ -1.87
CBWD3-209ENST00000614377 TTC8Q8TAM2 541 aa3.4□□□□□ -1.87
CBWD3-209ENST00000614377 SPATA18Q8TC71 538 aa3.4□□□□□ -1.87
CBWD3-209ENST00000614377 CUL5Q93034 780 aa3.4□□□□□ -1.87
CBWD3-209ENST00000614377 SIN3AQ96ST3 1273 aa3.4□□□□□ -1.87
CBWD3-209ENST00000614377 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.4□□□□□ -1.87
CBWD3-209ENST00000614377 OXCT2Q9BYC2 517 aaPredicted RBP3.4□□□□□ -1.87
CBWD3-209ENST00000614377 NACAP1Q9BZK3 213 aa3.4□□□□□ -1.87
CBWD3-209ENST00000614377 TRIM8Q9BZR9 551 aa3.4□□□□□ -1.87
CBWD3-209ENST00000614377 CCDC113Q9H0I3 377 aa3.4□□□□□ -1.87
CBWD3-209ENST00000614377 TTC12Q9H892 705 aaPredicted RBP3.4□□□□□ -1.87
CBWD3-209ENST00000614377 GPR108Q9NPR9 543 aa3.4□□□□□ -1.87
CBWD3-209ENST00000614377 C9orf78Q9NZ63 289 aaPredicted RBP3.4□□□□□ -1.87
CBWD3-209ENST00000614377 SEPT10Q9P0V9 454 aa3.4□□□□□ -1.87
CBWD3-209ENST00000614377 CNTN3Q9P232 1028 aa3.4□□□□□ -1.87
CBWD3-209ENST00000614377 HESX1Q9UBX0 185 aa3.4□□□□□ -1.87
CBWD3-209ENST00000614377 STK39Q9UEW8 545 aa3.4□□□□□ -1.87
CBWD3-209ENST00000614377 PA2G4Q9UQ80 394 aaKnown RBP3.4□□□□□ -1.87
CBWD3-209ENST00000614377 PCDHGC5Q9Y5F6 944 aa3.4□□□□□ -1.87
CBWD3-209ENST00000614377 TACC3Q9Y6A5 838 aa3.4□□□□□ -1.87
CBWD3-209ENST00000614377 THOC2Q8NI27 1593 aaKnown RBP3.4□□□□□ -1.87
CBWD3-209ENST00000614377 KLRG2A4D1S0 409 aaPredicted RBP3.39□□□□□ -1.87
CBWD3-209ENST00000614377 SORBS3O60504 671 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 ICMTO60725 284 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 COBLO75128 1261 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 TBCAO75347 108 aaKnown RBP3.39□□□□□ -1.87
CBWD3-209ENST00000614377 HCLS1P14317 486 aaPredicted RBP3.39□□□□□ -1.87
CBWD3-209ENST00000614377 ATP2B4P23634 1241 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 RANBP1P43487 201 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 SCRN1Q12765 414 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 SP140Q13342 867 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 LAMC2Q13753 1193 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 ARMC4Q5T2S8 1044 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 CEP135Q66GS9 1140 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 CCDC129Q6ZRS4 1044 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 TTLL7Q6ZT98 887 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 TADA2BQ86TJ2 420 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 BRSK1Q8TDC3 778 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 SNX21Q969T3 373 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 SAAL1Q96ER3 474 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 DTNBP1Q96EV8 351 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 NLRP3Q96P20 1036 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 SRPK1Q96SB4 655 aaKnown RBP3.39□□□□□ -1.87
CBWD3-209ENST00000614377 NAP1L3Q99457 506 aaPredicted RBP3.39□□□□□ -1.87
CBWD3-209ENST00000614377 PLVAPQ9BX97 442 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 DBNDD1Q9H9R9 158 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 LUC7LQ9NQ29 371 aaKnown RBP3.39□□□□□ -1.87
CBWD3-209ENST00000614377 DDX21Q9NR30 783 aaKnown RBP eCLIP3.39□□□□□ -1.87
CBWD3-209ENST00000614377 RASSF1Q9NS23 344 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 STAP2Q9UGK3 403 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 PHF24Q9UPV7 400 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 GOLGA6L10A0A0M3HER8 536 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 PRMT3O60678 531 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 KCNJ13O60928 360 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 PRPF40AO75400 957 aaKnown RBP3.39□□□□□ -1.87
CBWD3-209ENST00000614377 ALOX15P16050 662 aaPredicted RBP3.39□□□□□ -1.87
CBWD3-209ENST00000614377 PRLRP16471 622 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 TYRP1P17643 537 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 GNAT2P19087 354 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 GRK2P25098 689 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 COL8A1P27658 744 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 ADD1P35611 737 aaKnown RBP3.39□□□□□ -1.87
CBWD3-209ENST00000614377 SKIV2L2P42285 1042 aaKnown RBP3.39□□□□□ -1.87
CBWD3-209ENST00000614377 PTGIRP43119 386 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 PLA2G4AP47712 749 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 KIF11P52732 1056 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 ARPC4P59998 168 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 PFKPQ01813 784 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 ROR2Q01974 943 aaKnown RBP3.39□□□□□ -1.87
CBWD3-209ENST00000614377 TNIP1Q15025 636 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 MEX3CQ5U5Q3 659 aaKnown RBP3.39□□□□□ -1.87
CBWD3-209ENST00000614377 ARHGEF18Q6ZSZ5 1173 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 BRINP3Q76B58 766 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 RUFY3Q7L099 469 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 C14orf80Q86SX3 495 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 RNF135Q8IUD6 432 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 REXO1L1PQ8IX06 675 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 NEK11Q8NG66 645 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 KAT2BQ92831 832 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 SDCCAG3Q96C92 435 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 MOGAT1Q96PD6 335 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 TCF12Q99081 682 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 PARD6BQ9BYG5 372 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 PCDH18Q9HCL0 1135 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 KCTD5Q9NXV2 234 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 PRELID1Q9Y255 219 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 GPRASP1Q5JY77 1395 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 DHX57Q6P158 1386 aaKnown RBP3.39□□□□□ -1.87
CBWD3-209ENST00000614377 MIA2Q96PC5 1412 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 RSF1Q96T23 1441 aaPredicted RBP3.39□□□□□ -1.87
CBWD3-209ENST00000614377 ABCC11Q96J66 1382 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 TTC34A8MYJ7 566 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 TMEM232C9JQI7 657 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 hCG_1984214I3L0E3 225 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms