RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 ZNF396Q96N95 335 aaPredicted RBP11.22□□□□□ -0.61
GGA3-221ENST00000614198 GPRC5DQ9NZD1 345 aa11.22□□□□□ -0.61
GGA3-221ENST00000614198 KINO60870 393 aaKnown RBP11.22□□□□□ -0.61
GGA3-221ENST00000614198 URI1O94763 535 aaPredicted RBP11.22□□□□□ -0.61
GGA3-221ENST00000614198 TBC1D8O95759 1140 aa11.22□□□□□ -0.61
GGA3-221ENST00000614198 SAFBQ15424 915 aaKnown RBP eCLIP11.22□□□□□ -0.61
GGA3-221ENST00000614198 FAM83BQ5T0W9 1011 aa11.22□□□□□ -0.61
GGA3-221ENST00000614198 WASF1Q92558 559 aa11.22□□□□□ -0.61
GGA3-221ENST00000614198 SRRTQ9BXP5 876 aaKnown RBP11.22□□□□□ -0.61
GGA3-221ENST00000614198 ZBTB21Q9ULJ3 1066 aa11.22□□□□□ -0.61
GGA3-221ENST00000614198 PHF20L1A8MW92 1017 aa11.22□□□□□ -0.61
GGA3-221ENST00000614198 ADM5C9JUS6 153 aa11.22□□□□□ -0.61
GGA3-221ENST00000614198 POTEIP0CG38 1075 aa11.22□□□□□ -0.61
GGA3-221ENST00000614198 POTEJP0CG39 1038 aa11.22□□□□□ -0.61
GGA3-221ENST00000614198 RCAN1P53805 252 aa11.22□□□□□ -0.61
GGA3-221ENST00000614198 GPR162Q16538 588 aa11.22□□□□□ -0.61
GGA3-221ENST00000614198 BRAPQ7Z569 592 aa11.22□□□□□ -0.61
GGA3-221ENST00000614198 CNKSR2Q8WXI2 1034 aa11.22□□□□□ -0.61
GGA3-221ENST00000614198 CCDC34Q96HJ3 373 aa11.22□□□□□ -0.61
GGA3-221ENST00000614198 KANSL2Q9H9L4 492 aa11.22□□□□□ -0.61
GGA3-221ENST00000614198 IMPACTQ9P2X3 320 aa11.22□□□□□ -0.61
GGA3-221ENST00000614198 PCDHA6Q9UN73 950 aa11.22□□□□□ -0.61
GGA3-221ENST00000614198 JRKLQ9Y4A0 524 aa11.22□□□□□ -0.61
GGA3-221ENST00000614198 PCDHA8Q9Y5H6 950 aa11.22□□□□□ -0.61
GGA3-221ENST00000614198 GREB1LQ9C091 1923 aaPredicted RBP11.22□□□□□ -0.61
GGA3-221ENST00000614198 SMCO2A6NFE2 343 aa11.21□□□□□ -0.61
GGA3-221ENST00000614198 USP17L15C9J2P7 530 aa11.21□□□□□ -0.61
GGA3-221ENST00000614198 USP17L13C9JLJ4 530 aa11.21□□□□□ -0.61
GGA3-221ENST00000614198 USP17L11C9JVI0 530 aa11.21□□□□□ -0.61
GGA3-221ENST00000614198 USP17L18D6R9N7 530 aa11.21□□□□□ -0.61
GGA3-221ENST00000614198 USP17L22D6RA61 530 aa11.21□□□□□ -0.61
GGA3-221ENST00000614198 USP17L17D6RBQ6 530 aa11.21□□□□□ -0.61
GGA3-221ENST00000614198 USP17L19D6RCP7 530 aa11.21□□□□□ -0.61
GGA3-221ENST00000614198 USP17L20D6RJB6 530 aa11.21□□□□□ -0.61
GGA3-221ENST00000614198 SNHG28P0DPA3 235 aa11.21□□□□□ -0.61
GGA3-221ENST00000614198 USP17L24Q0WX57 530 aa11.21□□□□□ -0.61
GGA3-221ENST00000614198 USP17L6PQ6QN14 398 aa11.21□□□□□ -0.61
GGA3-221ENST00000614198 TMEM179Q6ZVK1 233 aa11.21□□□□□ -0.61
GGA3-221ENST00000614198 GRAMD1CQ8IYS0 662 aa11.21□□□□□ -0.61
GGA3-221ENST00000614198 EPSTI1Q96J88 318 aa11.21□□□□□ -0.61
GGA3-221ENST00000614198 POLR3EQ9NVU0 708 aa11.21□□□□□ -0.61
GGA3-221ENST00000614198 BARHL2Q9NY43 387 aa11.21□□□□□ -0.61
GGA3-221ENST00000614198 DNAI1Q9UI46 699 aa11.21□□□□□ -0.61
GGA3-221ENST00000614198 PLIN4Q96Q06 1357 aa11.21□□□□□ -0.61
GGA3-221ENST00000614198 BIN1O00499 593 aa11.21□□□□□ -0.62
GGA3-221ENST00000614198 TADA3O75528 432 aa11.21□□□□□ -0.62
GGA3-221ENST00000614198 SASH3O75995 380 aa11.21□□□□□ -0.62
GGA3-221ENST00000614198 CASP1P29466 404 aa11.21□□□□□ -0.62
GGA3-221ENST00000614198 SLC39A14Q15043 492 aa11.21□□□□□ -0.62
GGA3-221ENST00000614198 IL17AQ16552 155 aa11.21□□□□□ -0.62
GGA3-221ENST00000614198 TMC6Q7Z403 805 aa11.21□□□□□ -0.62
GGA3-221ENST00000614198 METTL16Q86W50 562 aaKnown RBP11.21□□□□□ -0.62
GGA3-221ENST00000614198 AOPEPQ8N6M6 819 aa11.21□□□□□ -0.62
GGA3-221ENST00000614198 P2RX7Q99572 595 aaKnown RBP11.21□□□□□ -0.62
GGA3-221ENST00000614198 VPS33BQ9H267 617 aa11.21□□□□□ -0.62
GGA3-221ENST00000614198 EFCAB8A8MWE9 144 aa11.21□□□□□ -0.62
GGA3-221ENST00000614198 H7C1D1 291 aa11.21□□□□□ -0.62
GGA3-221ENST00000614198 SEC31AO94979 1220 aaKnown RBP11.21□□□□□ -0.62
GGA3-221ENST00000614198 ACTN2P35609 894 aa11.21□□□□□ -0.62
GGA3-221ENST00000614198 CAP2P40123 477 aa11.21□□□□□ -0.62
GGA3-221ENST00000614198 SLC30A10Q6XR72 485 aa11.21□□□□□ -0.62
GGA3-221ENST00000614198 C11orf57Q6ZUT1 292 aaPredicted RBP11.21□□□□□ -0.62
GGA3-221ENST00000614198 BLIDQ8IZY5 108 aa11.21□□□□□ -0.62
GGA3-221ENST00000614198 TBC1D5Q92609 795 aa11.21□□□□□ -0.62
GGA3-221ENST00000614198 RRP36Q96EU6 259 aaKnown RBP11.21□□□□□ -0.62
GGA3-221ENST00000614198 FOXP1Q9H334 677 aaPredicted RBP11.21□□□□□ -0.62
GGA3-221ENST00000614198 PHLPP2Q6ZVD8 1323 aa11.21□□□□□ -0.62
GGA3-221ENST00000614198 PP2D1A8MPX8 630 aa11.2□□□□□ -0.62
GGA3-221ENST00000614198 CLGNO14967 610 aa11.2□□□□□ -0.62
GGA3-221ENST00000614198 MAGEA9P43362 315 aa11.2□□□□□ -0.62
GGA3-221ENST00000614198 STX1AQ16623 288 aa11.2□□□□□ -0.62
GGA3-221ENST00000614198 MTMR14Q8NCE2 650 aa11.2□□□□□ -0.62
GGA3-221ENST00000614198 BANK1Q8NDB2 785 aa11.2□□□□□ -0.62
GGA3-221ENST00000614198 STAMQ92783 540 aa11.2□□□□□ -0.62
GGA3-221ENST00000614198 PLIN2Q99541 437 aa11.2□□□□□ -0.62
GGA3-221ENST00000614198 ZNF341Q9BYN7 854 aa11.2□□□□□ -0.62
GGA3-221ENST00000614198 RIOX1Q9H6W3 641 aa11.2□□□□□ -0.62
GGA3-221ENST00000614198 LTBP3Q9NS15 1303 aa11.2□□□□□ -0.62
GGA3-221ENST00000614198 PFKFB1P16118 471 aa11.2□□□□□ -0.62
GGA3-221ENST00000614198 ETF1P62495 437 aaKnown RBP11.2□□□□□ -0.62
GGA3-221ENST00000614198 TTC31Q49AM3 519 aaPredicted RBP11.2□□□□□ -0.62
GGA3-221ENST00000614198 CC2D1AQ6P1N0 951 aaPredicted RBP11.2□□□□□ -0.62
GGA3-221ENST00000614198 CCDC174Q6PII3 467 aa11.2□□□□□ -0.62
GGA3-221ENST00000614198 KIFC2Q96AC6 838 aa11.2□□□□□ -0.62
GGA3-221ENST00000614198 CCDC17Q96LX7 622 aa11.2□□□□□ -0.62
GGA3-221ENST00000614198 ADAM21Q9UKJ8 722 aa11.2□□□□□ -0.62
GGA3-221ENST00000614198 A0A087X0B3 334 aa11.19□□□□□ -0.62
GGA3-221ENST00000614198 IVLP07476 585 aa11.19□□□□□ -0.62
GGA3-221ENST00000614198 SFPQP23246 707 aaKnown RBP eCLIP11.19□□□□□ -0.62
GGA3-221ENST00000614198 PTGDRQ13258 359 aa11.19□□□□□ -0.62
GGA3-221ENST00000614198 PPP2R5BQ15173 497 aa11.19□□□□□ -0.62
GGA3-221ENST00000614198 QRICH1Q2TAL8 776 aa11.19□□□□□ -0.62
GGA3-221ENST00000614198 ENGASEQ8NFI3 743 aa11.19□□□□□ -0.62
GGA3-221ENST00000614198 ZNF526Q8TF50 670 aaPredicted RBP11.19□□□□□ -0.62
GGA3-221ENST00000614198 WNK4Q96J92 1243 aa11.19□□□□□ -0.62
GGA3-221ENST00000614198 CSRNP2Q9H175 543 aa11.19□□□□□ -0.62
GGA3-221ENST00000614198 TMEM60Q9H2L4 133 aa11.19□□□□□ -0.62
GGA3-221ENST00000614198 SEC63Q9UGP8 760 aaKnown RBP11.19□□□□□ -0.62
GGA3-221ENST00000614198 M0R2N6 131 aa11.19□□□□□ -0.62
GGA3-221ENST00000614198 EDIL3O43854 480 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms