RNA–Protein interactions for RNA: ENST00000613928.1

CCL3-205, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 5

Gene CCL3, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-205ENST00000613928 CCDC83Q8IWF9 413 aa9.92□□□□□ -0.82
CCL3-205ENST00000613928 GOLGA6L1Q8N7Z2 621 aa9.92□□□□□ -0.82
CCL3-205ENST00000613928 CRAMP1Q96RY5 1269 aa9.92□□□□□ -0.82
CCL3-205ENST00000613928 IGFLR1Q9H665 355 aa9.92□□□□□ -0.82
CCL3-205ENST00000613928 ARMT1Q9H993 441 aa9.92□□□□□ -0.82
CCL3-205ENST00000613928 SH2B1Q9NRF2 756 aaPredicted RBP9.92□□□□□ -0.82
CCL3-205ENST00000613928 LRP2BPQ9P2M1 347 aa9.92□□□□□ -0.82
CCL3-205ENST00000613928 GDF2Q9UK05 429 aaPredicted RBP9.92□□□□□ -0.82
CCL3-205ENST00000613928 SBF1O95248 1867 aa9.91□□□□□ -0.82
CCL3-205ENST00000613928 XDHP47989 1333 aa9.91□□□□□ -0.82
CCL3-205ENST00000613928 PDS5AQ29RF7 1337 aaKnown RBP9.91□□□□□ -0.82
CCL3-205ENST00000613928 BBOX1O75936 387 aa9.91□□□□□ -0.82
CCL3-205ENST00000613928 KIF4AO95239 1232 aa9.91□□□□□ -0.82
CCL3-205ENST00000613928 MBD4O95243 580 aa9.91□□□□□ -0.82
CCL3-205ENST00000613928 HAND2P61296 217 aa9.91□□□□□ -0.82
CCL3-205ENST00000613928 TAGLNQ01995 201 aaKnown RBP9.91□□□□□ -0.82
CCL3-205ENST00000613928 TBC1D8BQ0IIM8 1120 aa9.91□□□□□ -0.82
CCL3-205ENST00000613928 FSTL1Q12841 308 aa9.91□□□□□ -0.82
CCL3-205ENST00000613928 ANKRD1Q15327 319 aa9.91□□□□□ -0.82
CCL3-205ENST00000613928 ALX1Q15699 326 aa9.91□□□□□ -0.82
CCL3-205ENST00000613928 IMMTQ16891 758 aaKnown RBP9.91□□□□□ -0.82
CCL3-205ENST00000613928 C15orf52Q6ZUT6 534 aaKnown RBP9.91□□□□□ -0.82
CCL3-205ENST00000613928 ADGRA1Q86SQ6 560 aa9.91□□□□□ -0.82
CCL3-205ENST00000613928 NCAPG2Q86XI2 1143 aa9.91□□□□□ -0.82
CCL3-205ENST00000613928 VPS37DQ86XT2 251 aa9.91□□□□□ -0.82
CCL3-205ENST00000613928 LCORLQ8N3X6 602 aa9.91□□□□□ -0.82
CCL3-205ENST00000613928 NECAB1Q8N987 351 aa9.91□□□□□ -0.82
CCL3-205ENST00000613928 ZNF384Q8TF68 577 aa9.91□□□□□ -0.82
CCL3-205ENST00000613928 SPACA7Q96KW9 195 aa9.91□□□□□ -0.82
CCL3-205ENST00000613928 FRMD6Q96NE9 622 aa9.91□□□□□ -0.82
CCL3-205ENST00000613928 GPR101Q96P66 508 aaPredicted RBP9.91□□□□□ -0.82
CCL3-205ENST00000613928 DUSP9Q99956 384 aaKnown RBP9.91□□□□□ -0.82
CCL3-205ENST00000613928 BRIP1Q9BX63 1249 aa9.91□□□□□ -0.82
CCL3-205ENST00000613928 OXCT2Q9BYC2 517 aaPredicted RBP9.91□□□□□ -0.82
CCL3-205ENST00000613928 EPB41L4AQ9HCS5 686 aaPredicted RBP9.91□□□□□ -0.82
CCL3-205ENST00000613928 DNAJB12Q9NXW2 375 aaKnown RBP9.91□□□□□ -0.82
CCL3-205ENST00000613928 ABCF2Q9UG63 623 aa9.91□□□□□ -0.82
CCL3-205ENST00000613928 SALL4Q9UJQ4 1053 aa9.91□□□□□ -0.82
CCL3-205ENST00000613928 CACNA1SQ13698 1873 aa9.91□□□□□ -0.82
CCL3-205ENST00000613928 ADARB2-AS1A8MUL3 147 aa9.9□□□□□ -0.82
CCL3-205ENST00000613928 GSG1L2A8MUP6 293 aa9.9□□□□□ -0.82
CCL3-205ENST00000613928 PRKAB2O43741 272 aa9.9□□□□□ -0.82
CCL3-205ENST00000613928 DTNBO60941 627 aa9.9□□□□□ -0.82
CCL3-205ENST00000613928 BAG4O95429 457 aaKnown RBP9.9□□□□□ -0.82
CCL3-205ENST00000613928 POLR3DP05423 398 aaPredicted RBP9.9□□□□□ -0.82
CCL3-205ENST00000613928 HMGB1P09429 215 aaKnown RBP9.9□□□□□ -0.82
CCL3-205ENST00000613928 CYP7A1P22680 504 aa9.9□□□□□ -0.82
CCL3-205ENST00000613928 MB21D2Q8IYB1 491 aaPredicted RBP9.9□□□□□ -0.82
CCL3-205ENST00000613928 IFNL3Q8IZI9 196 aa9.9□□□□□ -0.82
CCL3-205ENST00000613928 TDRD7Q8NHU6 1098 aaKnown RBP9.9□□□□□ -0.82
CCL3-205ENST00000613928 CNTNAP3BQ96NU0 1288 aa9.9□□□□□ -0.82
CCL3-205ENST00000613928 NSUN5Q96P11 429 aaKnown RBP9.9□□□□□ -0.82
CCL3-205ENST00000613928 LRRC2Q9BYS8 371 aa9.9□□□□□ -0.82
CCL3-205ENST00000613928 AGXT2Q9BYV1 514 aa9.9□□□□□ -0.82
CCL3-205ENST00000613928 CNTNAP3Q9BZ76 1288 aa9.9□□□□□ -0.82
CCL3-205ENST00000613928 RRAGCQ9HB90 399 aa9.9□□□□□ -0.82
CCL3-205ENST00000613928 NPHS2Q9NP85 383 aa9.9□□□□□ -0.82
CCL3-205ENST00000613928 RAI14Q9P0K7 980 aa9.9□□□□□ -0.82
CCL3-205ENST00000613928 RNF181Q9P0P0 153 aa9.9□□□□□ -0.82
CCL3-205ENST00000613928 PARP2Q9UGN5 583 aa9.9□□□□□ -0.82
CCL3-205ENST00000613928 GGA1Q9UJY5 639 aa9.9□□□□□ -0.82
CCL3-205ENST00000613928 LRRC37AA6NMS7 1700 aa9.9□□□□□ -0.83
CCL3-205ENST00000613928 ZMYM6O95789 1325 aa9.89□□□□□ -0.83
CCL3-205ENST00000613928 ZNF213O14771 459 aa9.89□□□□□ -0.83
CCL3-205ENST00000613928 WFS1O76024 890 aa9.89□□□□□ -0.83
CCL3-205ENST00000613928 GNA15P30679 374 aa9.89□□□□□ -0.83
CCL3-205ENST00000613928 KRT76Q01546 638 aa9.89□□□□□ -0.83
CCL3-205ENST00000613928 CHAF1AQ13111 956 aaPredicted RBP9.89□□□□□ -0.83
CCL3-205ENST00000613928 SLCO4C1Q6ZQN7 724 aa9.89□□□□□ -0.83
CCL3-205ENST00000613928 TBC1D10CQ8IV04 446 aa9.89□□□□□ -0.83
CCL3-205ENST00000613928 SP8Q8IXZ3 490 aa9.89□□□□□ -0.83
CCL3-205ENST00000613928 MIGA1Q8NAN2 632 aa9.89□□□□□ -0.83
CCL3-205ENST00000613928 BRF1Q92994 677 aa9.89□□□□□ -0.83
CCL3-205ENST00000613928 NSUN4Q96CB9 384 aaKnown RBP9.89□□□□□ -0.83
CCL3-205ENST00000613928 GBP4Q96PP9 640 aa9.89□□□□□ -0.83
CCL3-205ENST00000613928 RIOK1Q9BRS2 568 aaKnown RBP9.89□□□□□ -0.83
CCL3-205ENST00000613928 RBSNQ9H1K0 784 aa9.89□□□□□ -0.83
CCL3-205ENST00000613928 KLF15Q9UIH9 416 aa9.89□□□□□ -0.83
CCL3-205ENST00000613928 SMC3Q9UQE7 1217 aa9.89□□□□□ -0.83
CCL3-205ENST00000613928 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.89□□□□□ -0.83
CCL3-205ENST00000613928 TACC3Q9Y6A5 838 aa9.89□□□□□ -0.83
CCL3-205ENST00000613928 LTBP1Q14766 1721 aa9.88□□□□□ -0.83
CCL3-205ENST00000613928 TIAM2Q8IVF5 1701 aa9.88□□□□□ -0.83
CCL3-205ENST00000613928 MYH13Q9UKX3 1938 aa9.88□□□□□ -0.83
CCL3-205ENST00000613928 UFL1O94874 794 aa9.88□□□□□ -0.83
CCL3-205ENST00000613928 APPP05067 770 aa9.88□□□□□ -0.83
CCL3-205ENST00000613928 HSPA1AP0DMV8 641 aaKnown RBP9.88□□□□□ -0.83
CCL3-205ENST00000613928 HSPA1BP0DMV9 641 aaKnown RBP9.88□□□□□ -0.83
CCL3-205ENST00000613928 SRGNP10124 158 aa9.88□□□□□ -0.83
CCL3-205ENST00000613928 NPR1P16066 1061 aa9.88□□□□□ -0.83
CCL3-205ENST00000613928 GJB2P29033 226 aa9.88□□□□□ -0.83
CCL3-205ENST00000613928 ADH7P40394 386 aa9.88□□□□□ -0.83
CCL3-205ENST00000613928 ANTXR2P58335 489 aa9.88□□□□□ -0.83
CCL3-205ENST00000613928 DYNLL1P63167 89 aaKnown RBP9.88□□□□□ -0.83
CCL3-205ENST00000613928 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.88□□□□□ -0.83
CCL3-205ENST00000613928 NAA16Q6N069 864 aaPredicted RBP9.88□□□□□ -0.83
CCL3-205ENST00000613928 CHST3Q7LGC8 479 aa9.88□□□□□ -0.83
CCL3-205ENST00000613928 FBXL16Q8N461 479 aa9.88□□□□□ -0.83
CCL3-205ENST00000613928 NCOA7Q8NI08 942 aa9.88□□□□□ -0.83
CCL3-205ENST00000613928 TBC1D16Q8TBP0 767 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms