RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 MOGAT1Q96PD6 335 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 UQCC2Q9BRT2 126 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 IER2Q9BTL4 223 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 NSRP1Q9H0G5 558 aaKnown RBP6.19□□□□□ -1.42
CCL16-206ENST00000613642 OSBPL5Q9H0X9 879 aaPredicted RBP6.19□□□□□ -1.42
CCL16-206ENST00000613642 SEMA4AQ9H3S1 761 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 PARVGQ9HBI0 331 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 PDRG1Q9NUG6 133 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 TCP11L1Q9NUJ3 509 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 NOP53Q9NZM5 478 aaKnown RBP6.19□□□□□ -1.42
CCL16-206ENST00000613642 AIPL1Q9NZN9 384 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 ZNF148Q9UQR1 794 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 NUDCQ9Y266 331 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 DAAM1Q9Y4D1 1078 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 GAKO14976 1311 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 MIA2Q96PC5 1412 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 CEP164Q9UPV0 1460 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 TMEM229AB2RXF0 380 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 POLR3GO15318 223 aaPredicted RBP6.18□□□□□ -1.42
CCL16-206ENST00000613642 ATP9BO43861 1147 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 ZNF254O75437 659 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 MBD4O95243 580 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 YEATS4O95619 227 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 PENKP01210 267 aaPredicted RBP6.18□□□□□ -1.42
CCL16-206ENST00000613642 CYP1A2P05177 515 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 S100A6P06703 90 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 ALOX15P16050 662 aaPredicted RBP6.18□□□□□ -1.42
CCL16-206ENST00000613642 ENDOUP21128 410 aaKnown RBP6.18□□□□□ -1.42
CCL16-206ENST00000613642 ADH6P28332 368 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 CHRNA4P43681 627 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 AMPD3Q01432 767 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 DR1Q01658 176 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 SCRN1Q12765 414 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 SNX1Q13596 522 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 BTG3Q14201 252 aaPredicted RBP6.18□□□□□ -1.42
CCL16-206ENST00000613642 TOMM20Q15388 145 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 PROSER3Q2NL68 480 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 TRIM71Q2Q1W2 868 aaKnown RBP6.18□□□□□ -1.42
CCL16-206ENST00000613642 TMEM95Q3KNT9 176 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 MEX3CQ5U5Q3 659 aaKnown RBP6.18□□□□□ -1.42
CCL16-206ENST00000613642 CHSY3Q70JA7 882 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 TMC6Q7Z403 805 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 PPFIBP1Q86W92 1011 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 FCHSD1Q86WN1 690 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 WDR75Q8IWA0 830 aaKnown RBP6.18□□□□□ -1.42
CCL16-206ENST00000613642 ITPRIPQ8IWB1 547 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 LRRC43Q8N309 656 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 ZBTB8BQ8NAP8 495 aaPredicted RBP6.18□□□□□ -1.42
CCL16-206ENST00000613642 PLPP7Q8NBV4 271 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 GIMAP8Q8ND71 665 aaPredicted RBP6.18□□□□□ -1.42
CCL16-206ENST00000613642 NEK11Q8NG66 645 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 ATP6V0A1Q93050 837 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 RELTQ969Z4 430 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 CABS1Q96KC9 395 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 C1orf74Q96LT6 269 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 GORASP1Q9BQQ3 440 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 EIF2AQ9BY44 585 aaKnown RBP6.18□□□□□ -1.42
CCL16-206ENST00000613642 TRIM8Q9BZR9 551 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 DDX21Q9NR30 783 aaKnown RBP eCLIP6.18□□□□□ -1.42
CCL16-206ENST00000613642 PICK1Q9NRD5 415 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 HELLSQ9NRZ9 838 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 ZDHHC3Q9NYG2 299 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 EPS15L1Q9UBC2 864 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 SATB2Q9UPW6 733 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 MAPK8IP1Q9UQF2 711 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.18□□□□□ -1.42
CCL16-206ENST00000613642 PTPRCP08575 1304 aa6.18□□□□□ -1.42
CCL16-206ENST00000613642 ERICH2A1L162 156 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 CCDC162PA2VCL2 907 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 HNRNPCL2B2RXH8 293 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 M0R2C6 588 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 CDK2AP1O14519 115 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 ZEB2O60315 1214 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 HNRNPCL1O60812 293 aaKnown RBP6.17□□□□□ -1.42
CCL16-206ENST00000613642 SKAP2O75563 359 aaPredicted RBP6.17□□□□□ -1.42
CCL16-206ENST00000613642 SFTPCP11686 197 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 ATP5JP18859 108 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 HSD3B2P26439 372 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 WEE1P30291 646 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 MXI1P50539 228 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 BLVRAP53004 296 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 COPAP53621 1224 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 STIM1Q13586 685 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 SEPT6Q14141 434 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 ARMC4Q5T2S8 1044 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 TSHZ3Q63HK5 1081 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 UNC5DQ6UXZ4 953 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 BICDL1Q6ZP65 573 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 ZNF804AQ7Z570 1209 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 LSMEM2Q8N112 164 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 Q8N3U1 123 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 RNF10Q8N5U6 811 aaKnown RBP6.17□□□□□ -1.42
CCL16-206ENST00000613642 LILRB1Q8NHL6 650 aaPredicted RBP6.17□□□□□ -1.42
CCL16-206ENST00000613642 SNX21Q969T3 373 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 ZIC5Q96T25 663 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 APBA2Q99767 749 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 HERC2P3Q9BVR0 1158 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 UPF3BQ9BZI7 483 aaKnown RBP6.17□□□□□ -1.42
CCL16-206ENST00000613642 ACBD3Q9H3P7 528 aa6.17□□□□□ -1.42
CCL16-206ENST00000613642 TTC12Q9H892 705 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms