RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 ESYT3A0FGR9 886 aa15.34■□□□□ 0.05
HPS1-215ENST00000613394 USP14P54578 494 aa15.34■□□□□ 0.05
HPS1-215ENST00000613394 ARL6IP4Q66PJ3 421 aaKnown RBP15.34■□□□□ 0.05
HPS1-215ENST00000613394 SELENOOQ9BVL4 669 aa15.34■□□□□ 0.05
HPS1-215ENST00000613394 EBAG9O00559 213 aa15.33■□□□□ 0.05
HPS1-215ENST00000613394 HPDP32754 393 aaPredicted RBP15.33■□□□□ 0.05
HPS1-215ENST00000613394 RCAN1P53805 252 aa15.33■□□□□ 0.05
HPS1-215ENST00000613394 KRT25Q7Z3Z0 450 aa15.33■□□□□ 0.05
HPS1-215ENST00000613394 CERS3Q8IU89 383 aa15.33■□□□□ 0.05
HPS1-215ENST00000613394 RPGRQ92834 1020 aaKnown RBP15.33■□□□□ 0.05
HPS1-215ENST00000613394 ANKRD2Q9GZV1 360 aa15.33■□□□□ 0.05
HPS1-215ENST00000613394 SAMM50Q9Y512 469 aa15.33■□□□□ 0.05
HPS1-215ENST00000613394 GOLGA6L10A6NI86 522 aa15.33■□□□□ 0.04
HPS1-215ENST00000613394 ATP2C2O75185 946 aa15.33■□□□□ 0.04
HPS1-215ENST00000613394 VAV2P52735 878 aa15.33■□□□□ 0.04
HPS1-215ENST00000613394 APTXQ7Z2E3 356 aaKnown RBP15.33■□□□□ 0.04
HPS1-215ENST00000613394 MED4Q9NPJ6 270 aa15.33■□□□□ 0.04
HPS1-215ENST00000613394 PCDHA6Q9UN73 950 aa15.33■□□□□ 0.04
HPS1-215ENST00000613394 PCDHA8Q9Y5H6 950 aa15.33■□□□□ 0.04
HPS1-215ENST00000613394 FTCDO95954 541 aa15.33■□□□□ 0.04
HPS1-215ENST00000613394 EZH2Q15910 746 aaKnown RBP15.33■□□□□ 0.04
HPS1-215ENST00000613394 KCTD19Q17RG1 926 aaPredicted RBP15.33■□□□□ 0.04
HPS1-215ENST00000613394 TBC1D9BQ66K14 1250 aa15.33■□□□□ 0.04
HPS1-215ENST00000613394 CCDC155Q8N6L0 562 aa15.33■□□□□ 0.04
HPS1-215ENST00000613394 SPATA20Q8TB22 786 aa15.33■□□□□ 0.04
HPS1-215ENST00000613394 COL5A2P05997 1499 aaPredicted RBP15.33■□□□□ 0.04
HPS1-215ENST00000613394 ARFGEF2Q9Y6D5 1785 aa15.32■□□□□ 0.04
HPS1-215ENST00000613394 RFC4P35249 363 aa15.32■□□□□ 0.04
HPS1-215ENST00000613394 LIG3P49916 1009 aa15.32■□□□□ 0.04
HPS1-215ENST00000613394 KIF11P52732 1056 aa15.32■□□□□ 0.04
HPS1-215ENST00000613394 RBM5P52756 815 aaKnown RBP eCLIP15.32■□□□□ 0.04
HPS1-215ENST00000613394 POLR2FP61218 127 aaKnown RBP15.32■□□□□ 0.04
HPS1-215ENST00000613394 TTC31Q49AM3 519 aaPredicted RBP15.32■□□□□ 0.04
HPS1-215ENST00000613394 HERC4Q5GLZ8 1057 aaPredicted RBP15.32■□□□□ 0.04
HPS1-215ENST00000613394 CLEC10AQ8IUN9 316 aa15.32■□□□□ 0.04
HPS1-215ENST00000613394 TRIM58Q8NG06 486 aa15.32■□□□□ 0.04
HPS1-215ENST00000613394 DHTKD1Q96HY7 919 aaPredicted RBP15.32■□□□□ 0.04
HPS1-215ENST00000613394 MTA3Q9BTC8 594 aa15.32■□□□□ 0.04
HPS1-215ENST00000613394 THAP9Q9H5L6 903 aa15.32■□□□□ 0.04
HPS1-215ENST00000613394 FEZ2Q9UHY8 353 aaPredicted RBP15.32■□□□□ 0.04
HPS1-215ENST00000613394 LAMA4Q16363 1823 aa15.32■□□□□ 0.04
HPS1-215ENST00000613394 HERVK_113P62684 666 aa15.32■□□□□ 0.04
HPS1-215ENST00000613394 GNGT1P63211 74 aa15.32■□□□□ 0.04
HPS1-215ENST00000613394 FUT2Q10981 343 aa15.32■□□□□ 0.04
HPS1-215ENST00000613394 E2F4Q16254 413 aa15.32■□□□□ 0.04
HPS1-215ENST00000613394 CFAP58Q5T655 872 aa15.32■□□□□ 0.04
HPS1-215ENST00000613394 POTEDQ86YR6 584 aa15.32■□□□□ 0.04
HPS1-215ENST00000613394 BCAS4Q8TDM0 211 aa15.32■□□□□ 0.04
HPS1-215ENST00000613394 CAPN11Q9UMQ6 739 aa15.32■□□□□ 0.04
HPS1-215ENST00000613394 UFL1O94874 794 aa15.32■□□□□ 0.04
HPS1-215ENST00000613394 NDST4Q9H3R1 872 aa15.32■□□□□ 0.04
HPS1-215ENST00000613394 PCDHA13Q9Y5I0 950 aa15.32■□□□□ 0.04
HPS1-215ENST00000613394 ITIH6Q6UXX5 1313 aa15.32■□□□□ 0.04
HPS1-215ENST00000613394 GFPT1Q06210 699 aaPredicted RBP15.31■□□□□ 0.04
HPS1-215ENST00000613394 DCAF17Q5H9S7 520 aaPredicted RBP15.31■□□□□ 0.04
HPS1-215ENST00000613394 LRRC1Q9BTT6 524 aa15.31■□□□□ 0.04
HPS1-215ENST00000613394 MARF1Q9Y4F3 1742 aaKnown RBP15.31■□□□□ 0.04
HPS1-215ENST00000613394 SLC16A2P36021 539 aa15.31■□□□□ 0.04
HPS1-215ENST00000613394 EHHADHQ08426 723 aa15.31■□□□□ 0.04
HPS1-215ENST00000613394 UBE2SQ16763 222 aa15.31■□□□□ 0.04
HPS1-215ENST00000613394 COG1Q8WTW3 980 aa15.31■□□□□ 0.04
HPS1-215ENST00000613394 NOX5Q96PH1 765 aa15.31■□□□□ 0.04
HPS1-215ENST00000613394 TRIM9Q9C026 710 aa15.31■□□□□ 0.04
HPS1-215ENST00000613394 TMEM51Q9NW97 253 aa15.31■□□□□ 0.04
HPS1-215ENST00000613394 PACSIN2Q9UNF0 486 aaPredicted RBP15.31■□□□□ 0.04
HPS1-215ENST00000613394 ABCC6O95255 1503 aa15.31■□□□□ 0.04
HPS1-215ENST00000613394 BTDP43251 543 aa15.31■□□□□ 0.04
HPS1-215ENST00000613394 GSTO1P78417 241 aa15.31■□□□□ 0.04
HPS1-215ENST00000613394 GUCY2DQ02846 1103 aa15.31■□□□□ 0.04
HPS1-215ENST00000613394 MSANTD4Q8NCY6 345 aa15.31■□□□□ 0.04
HPS1-215ENST00000613394 LSM14BQ9BX40 385 aaKnown RBP15.31■□□□□ 0.04
HPS1-215ENST00000613394 TSGA10Q9BZW7 698 aa15.31■□□□□ 0.04
HPS1-215ENST00000613394 FAM53CQ9NYF3 392 aa15.31■□□□□ 0.04
HPS1-215ENST00000613394 ANAPC4Q9UJX5 808 aa15.31■□□□□ 0.04
HPS1-215ENST00000613394 KDM4FA0A1W2PPD8 638 aa15.3■□□□□ 0.04
HPS1-215ENST00000613394 RCCD1A6NED2 376 aa15.3■□□□□ 0.04
HPS1-215ENST00000613394 LRRC53A6NM62 1247 aa15.3■□□□□ 0.04
HPS1-215ENST00000613394 NDUFAB1O14561 156 aa15.3■□□□□ 0.04
HPS1-215ENST00000613394 PBX1P40424 430 aa15.3■□□□□ 0.04
HPS1-215ENST00000613394 MS4A14Q96JA4 679 aa15.3■□□□□ 0.04
HPS1-215ENST00000613394 REXO2Q9Y3B8 237 aaKnown RBP15.3■□□□□ 0.04
HPS1-215ENST00000613394 N4BP2Q86UW6 1770 aaPredicted RBP15.3■□□□□ 0.04
HPS1-215ENST00000613394 PCP11498 1178 aaKnown RBP15.3■□□□□ 0.04
HPS1-215ENST00000613394 ZNF219Q9P2Y4 722 aaPredicted RBP15.3■□□□□ 0.04
HPS1-215ENST00000613394 ORC4O43929 436 aa15.3■□□□□ 0.04
HPS1-215ENST00000613394 OPA1O60313 960 aa15.3■□□□□ 0.04
HPS1-215ENST00000613394 ZNF804AQ7Z570 1209 aa15.3■□□□□ 0.04
HPS1-215ENST00000613394 PROCA1Q8NCQ7 364 aaPredicted RBP15.3■□□□□ 0.04
HPS1-215ENST00000613394 WDR66Q8TBY9 1149 aa15.3■□□□□ 0.04
HPS1-215ENST00000613394 LARP4BQ92615 738 aaKnown RBP15.3■□□□□ 0.04
HPS1-215ENST00000613394 TRIM31Q9BZY9 425 aa15.3■□□□□ 0.04
HPS1-215ENST00000613394 TDP2O95551 362 aa15.29■□□□□ 0.04
HPS1-215ENST00000613394 ZNF76P36508 570 aa15.29■□□□□ 0.04
HPS1-215ENST00000613394 HYOU1Q9Y4L1 999 aa15.29■□□□□ 0.04
HPS1-215ENST00000613394 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.29■□□□□ 0.04
HPS1-215ENST00000613394 USP17L5A8MUK1 530 aa15.29■□□□□ 0.04
HPS1-215ENST00000613394 MAP2K7O14733 419 aa15.29■□□□□ 0.04
HPS1-215ENST00000613394 SLC9C1Q4G0N8 1177 aa15.29■□□□□ 0.04
HPS1-215ENST00000613394 CCDC84Q86UT8 332 aaPredicted RBP15.29■□□□□ 0.04
HPS1-215ENST00000613394 DGKHQ86XP1 1220 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms