RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 APOBEC3HQ6NTF7 200 aaKnown RBP15.8■□□□□ 0.12
PCDHGA3-202ENST00000612467 CNGA4Q8IV77 575 aa15.8■□□□□ 0.12
PCDHGA3-202ENST00000612467 MB21D1Q8N884 522 aa15.8■□□□□ 0.12
PCDHGA3-202ENST00000612467 PYM1Q9BRP8 204 aaKnown RBP15.8■□□□□ 0.12
PCDHGA3-202ENST00000612467 BLOC1S4Q9NUP1 217 aa15.8■□□□□ 0.12
PCDHGA3-202ENST00000612467 MYMKA6NI61 221 aa15.79■□□□□ 0.12
PCDHGA3-202ENST00000612467 ADCY7P51828 1080 aa15.79■□□□□ 0.12
PCDHGA3-202ENST00000612467 SLF2Q8IX21 1173 aa15.79■□□□□ 0.12
PCDHGA3-202ENST00000612467 EXOC1Q9NV70 894 aa15.79■□□□□ 0.12
PCDHGA3-202ENST00000612467 REXO2Q9Y3B8 237 aaKnown RBP15.79■□□□□ 0.12
PCDHGA3-202ENST00000612467 LTBP1Q14766 1721 aa15.79■□□□□ 0.12
PCDHGA3-202ENST00000612467 USP17L15C9J2P7 530 aa15.79■□□□□ 0.12
PCDHGA3-202ENST00000612467 USP17L13C9JLJ4 530 aa15.79■□□□□ 0.12
PCDHGA3-202ENST00000612467 USP17L11C9JVI0 530 aa15.79■□□□□ 0.12
PCDHGA3-202ENST00000612467 USP17L18D6R9N7 530 aa15.79■□□□□ 0.12
PCDHGA3-202ENST00000612467 USP17L22D6RA61 530 aa15.79■□□□□ 0.12
PCDHGA3-202ENST00000612467 USP17L17D6RBQ6 530 aa15.79■□□□□ 0.12
PCDHGA3-202ENST00000612467 USP17L19D6RCP7 530 aa15.79■□□□□ 0.12
PCDHGA3-202ENST00000612467 USP17L20D6RJB6 530 aa15.79■□□□□ 0.12
PCDHGA3-202ENST00000612467 H7C1D1 291 aa15.79■□□□□ 0.12
PCDHGA3-202ENST00000612467 MMP10P09238 476 aa15.79■□□□□ 0.12
PCDHGA3-202ENST00000612467 PRPHP41219 470 aa15.79■□□□□ 0.12
PCDHGA3-202ENST00000612467 USP17L24Q0WX57 530 aa15.79■□□□□ 0.12
PCDHGA3-202ENST00000612467 USP17L6PQ6QN14 398 aa15.79■□□□□ 0.12
PCDHGA3-202ENST00000612467 FEZ1Q99689 392 aa15.79■□□□□ 0.12
PCDHGA3-202ENST00000612467 COA1Q9GZY4 146 aa15.79■□□□□ 0.12
PCDHGA3-202ENST00000612467 LRWD1Q9UFC0 647 aa15.79■□□□□ 0.12
PCDHGA3-202ENST00000612467 IGKV6D-41A0A0C4DH26 115 aa15.78■□□□□ 0.12
PCDHGA3-202ENST00000612467 KLRG2A4D1S0 409 aaPredicted RBP15.78■□□□□ 0.12
PCDHGA3-202ENST00000612467 RASSF10A6NK89 507 aa15.78■□□□□ 0.12
PCDHGA3-202ENST00000612467 PSMA7O14818 248 aa15.78■□□□□ 0.12
PCDHGA3-202ENST00000612467 ZBTB22O15209 634 aa15.78■□□□□ 0.12
PCDHGA3-202ENST00000612467 NOVP48745 357 aa15.78■□□□□ 0.12
PCDHGA3-202ENST00000612467 RBM5P52756 815 aaKnown RBP eCLIP15.78■□□□□ 0.12
PCDHGA3-202ENST00000612467 ZNF543Q08ER8 600 aa15.78■□□□□ 0.12
PCDHGA3-202ENST00000612467 SMAP1Q8IYB5 467 aaPredicted RBP15.78■□□□□ 0.12
PCDHGA3-202ENST00000612467 BRWD3Q6RI45 1802 aa15.78■□□□□ 0.12
PCDHGA3-202ENST00000612467 ITIH6Q6UXX5 1313 aa15.78■□□□□ 0.12
PCDHGA3-202ENST00000612467 DDTLA6NHG4 134 aaPredicted RBP15.78■□□□□ 0.12
PCDHGA3-202ENST00000612467 TTLL1O95922 423 aa15.78■□□□□ 0.12
PCDHGA3-202ENST00000612467 IDEP14735 1019 aa15.78■□□□□ 0.12
PCDHGA3-202ENST00000612467 ARHGAP25P42331 645 aa15.78■□□□□ 0.12
PCDHGA3-202ENST00000612467 CACNB1Q02641 598 aaPredicted RBP15.78■□□□□ 0.12
PCDHGA3-202ENST00000612467 KCNB1Q14721 858 aa15.78■□□□□ 0.12
PCDHGA3-202ENST00000612467 ANKRD20A12PQ8NF67 263 aa15.78■□□□□ 0.12
PCDHGA3-202ENST00000612467 ZNF507Q8TCN5 953 aa15.78■□□□□ 0.12
PCDHGA3-202ENST00000612467 CNOT6LQ96LI5 555 aaKnown RBP15.78■□□□□ 0.12
PCDHGA3-202ENST00000612467 MTMR9Q96QG7 549 aa15.78■□□□□ 0.12
PCDHGA3-202ENST00000612467 SEMA6BQ9H3T3 888 aa15.78■□□□□ 0.12
PCDHGA3-202ENST00000612467 LGALS16A8MUM7 142 aa15.77■□□□□ 0.12
PCDHGA3-202ENST00000612467 RAD51AP2Q09MP3 1159 aa15.77■□□□□ 0.12
PCDHGA3-202ENST00000612467 SLC27A3Q5K4L6 730 aa15.77■□□□□ 0.12
PCDHGA3-202ENST00000612467 P2RX5Q93086 422 aa15.77■□□□□ 0.12
PCDHGA3-202ENST00000612467 TUBGCP2Q9BSJ2 902 aa15.77■□□□□ 0.12
PCDHGA3-202ENST00000612467 LAD1O00515 517 aa15.77■□□□□ 0.11
PCDHGA3-202ENST00000612467 TPM1P09493 284 aa15.77■□□□□ 0.11
PCDHGA3-202ENST00000612467 SPAG1Q07617 926 aa15.77■□□□□ 0.11
PCDHGA3-202ENST00000612467 WDR59Q6PJI9 974 aa15.77■□□□□ 0.11
PCDHGA3-202ENST00000612467 GOLGA6L9A6NEM1 432 aa15.76■□□□□ 0.11
PCDHGA3-202ENST00000612467 GDF11O95390 407 aa15.76■□□□□ 0.11
PCDHGA3-202ENST00000612467 SNHG28P0DPA3 235 aa15.76■□□□□ 0.11
PCDHGA3-202ENST00000612467 SNX29Q8TEQ0 813 aa15.76■□□□□ 0.11
PCDHGA3-202ENST00000612467 PCMTD1Q96MG8 357 aaPredicted RBP15.76■□□□□ 0.11
PCDHGA3-202ENST00000612467 FGFBP2Q9BYJ0 223 aa15.76■□□□□ 0.11
PCDHGA3-202ENST00000612467 TBC1D7Q9P0N9 293 aa15.76■□□□□ 0.11
PCDHGA3-202ENST00000612467 GUCA1BQ9UMX6 200 aa15.76■□□□□ 0.11
PCDHGA3-202ENST00000612467 FHOD1Q9Y613 1164 aa15.76■□□□□ 0.11
PCDHGA3-202ENST00000612467 FOCADQ5VW36 1801 aa15.76■□□□□ 0.11
PCDHGA3-202ENST00000612467 ENC1O14682 589 aa15.76■□□□□ 0.11
PCDHGA3-202ENST00000612467 KIF5CO60282 957 aa15.76■□□□□ 0.11
PCDHGA3-202ENST00000612467 TUBB4AP04350 444 aa15.76■□□□□ 0.11
PCDHGA3-202ENST00000612467 CRKP46108 304 aa15.76■□□□□ 0.11
PCDHGA3-202ENST00000612467 KIF4BQ2VIQ3 1234 aa15.76■□□□□ 0.11
PCDHGA3-202ENST00000612467 ZSCAN29Q8IWY8 852 aaPredicted RBP15.76■□□□□ 0.11
PCDHGA3-202ENST00000612467 EFCAB8A8MWE9 144 aa15.75■□□□□ 0.11
PCDHGA3-202ENST00000612467 SSBP05455 408 aaKnown RBP eCLIP15.75■□□□□ 0.11
PCDHGA3-202ENST00000612467 MTIF2P46199 727 aaKnown RBP15.75■□□□□ 0.11
PCDHGA3-202ENST00000612467 STIM1Q13586 685 aa15.75■□□□□ 0.11
PCDHGA3-202ENST00000612467 ASPRV1Q53RT3 343 aa15.75■□□□□ 0.11
PCDHGA3-202ENST00000612467 SH3BP5LQ7L8J4 393 aa15.75■□□□□ 0.11
PCDHGA3-202ENST00000612467 CCDC155Q8N6L0 562 aa15.75■□□□□ 0.11
PCDHGA3-202ENST00000612467 HAS1Q92839 578 aa15.75■□□□□ 0.11
PCDHGA3-202ENST00000612467 CALML4Q96GE6 196 aa15.75■□□□□ 0.11
PCDHGA3-202ENST00000612467 C7orf25Q9BPX7 421 aa15.75■□□□□ 0.11
PCDHGA3-202ENST00000612467 NAA15Q9BXJ9 866 aaKnown RBP15.75■□□□□ 0.11
PCDHGA3-202ENST00000612467 MAGEC2Q9UBF1 373 aaPredicted RBP15.75■□□□□ 0.11
PCDHGA3-202ENST00000612467 HDAC6Q9UBN7 1215 aa15.75■□□□□ 0.11
PCDHGA3-202ENST00000612467 MYH7BA7E2Y1 1941 aa15.75■□□□□ 0.11
PCDHGA3-202ENST00000612467 EPHB6O15197 1021 aa15.75■□□□□ 0.11
PCDHGA3-202ENST00000612467 CCNE1P24864 410 aa15.75■□□□□ 0.11
PCDHGA3-202ENST00000612467 CYP26C1Q6V0L0 522 aa15.75■□□□□ 0.11
PCDHGA3-202ENST00000612467 TMTC1Q8IUR5 882 aa15.75■□□□□ 0.11
PCDHGA3-202ENST00000612467 TEKT1Q969V4 418 aa15.75■□□□□ 0.11
PCDHGA3-202ENST00000612467 AK8Q96MA6 479 aa15.75■□□□□ 0.11
PCDHGA3-202ENST00000612467 P2RX7Q99572 595 aaKnown RBP15.75■□□□□ 0.11
PCDHGA3-202ENST00000612467 KANSL2Q9H9L4 492 aa15.75■□□□□ 0.11
PCDHGA3-202ENST00000612467 POLD4Q9HCU8 107 aa15.75■□□□□ 0.11
PCDHGA3-202ENST00000612467 NPHP3-ACAD11A0A0J9YXS1 232 aa15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 PLEKP08567 350 aaPredicted RBP15.74■□□□□ 0.11
PCDHGA3-202ENST00000612467 CHRNA5P30532 468 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms