RNA–Protein interactions for RNA: ENST00000612355.1

PPARGC1A-216, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 5 BASIC

Gene PPARGC1A, Length 936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-216ENST00000612355 CLASRPQ8N2M8 674 aaKnown RBP11.77□□□□□ -0.53
PPARGC1A-216ENST00000612355 GDPD5Q8WTR4 605 aa11.77□□□□□ -0.53
PPARGC1A-216ENST00000612355 MTMR4Q9NYA4 1195 aa11.77□□□□□ -0.53
PPARGC1A-216ENST00000612355 CLIP2Q9UDT6 1046 aa11.77□□□□□ -0.53
PPARGC1A-216ENST00000612355 DDX49Q9Y6V7 483 aaKnown RBP11.77□□□□□ -0.53
PPARGC1A-216ENST00000612355 PTPRZ1P23471 2315 aaPredicted RBP11.76□□□□□ -0.53
PPARGC1A-216ENST00000612355 LOC102724159A0A0B4J2E5 919 aa11.76□□□□□ -0.53
PPARGC1A-216ENST00000612355 LCHNA4D1U4 455 aa11.76□□□□□ -0.53
PPARGC1A-216ENST00000612355 RLBP1P12271 317 aa11.76□□□□□ -0.53
PPARGC1A-216ENST00000612355 WDR5P61964 334 aaKnown RBP11.76□□□□□ -0.53
PPARGC1A-216ENST00000612355 PWP2Q15269 919 aaKnown RBP11.76□□□□□ -0.53
PPARGC1A-216ENST00000612355 LRRFIP1Q32MZ4 808 aaKnown RBP11.76□□□□□ -0.53
PPARGC1A-216ENST00000612355 GIMAP6Q6P9H5 292 aa11.76□□□□□ -0.53
PPARGC1A-216ENST00000612355 ITPRIPQ8IWB1 547 aa11.76□□□□□ -0.53
PPARGC1A-216ENST00000612355 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.76□□□□□ -0.53
PPARGC1A-216ENST00000612355 CEP95Q96GE4 821 aa11.76□□□□□ -0.53
PPARGC1A-216ENST00000612355 PUS7LQ9H0K6 701 aaKnown RBP11.76□□□□□ -0.53
PPARGC1A-216ENST00000612355 CYP39A1Q9NYL5 469 aa11.76□□□□□ -0.53
PPARGC1A-216ENST00000612355 DMDP11532 3685 aa11.75□□□□□ -0.53
PPARGC1A-216ENST00000612355 RBM47A0AV96 593 aaKnown RBP11.75□□□□□ -0.53
PPARGC1A-216ENST00000612355 PLA2G6O60733 806 aa11.75□□□□□ -0.53
PPARGC1A-216ENST00000612355 TTLL1O95922 423 aa11.75□□□□□ -0.53
PPARGC1A-216ENST00000612355 BMP3P12645 472 aa11.75□□□□□ -0.53
PPARGC1A-216ENST00000612355 ATP5JP18859 108 aa11.75□□□□□ -0.53
PPARGC1A-216ENST00000612355 CPT1AP50416 773 aa11.75□□□□□ -0.53
PPARGC1A-216ENST00000612355 STAT2P52630 851 aa11.75□□□□□ -0.53
PPARGC1A-216ENST00000612355 ERVK-21P61565 698 aa11.75□□□□□ -0.53
PPARGC1A-216ENST00000612355 PTPN11Q06124 597 aaPredicted RBP11.75□□□□□ -0.53
PPARGC1A-216ENST00000612355 BFSP2Q13515 415 aa11.75□□□□□ -0.53
PPARGC1A-216ENST00000612355 KIAA1211Q6ZU35 1233 aa11.75□□□□□ -0.53
PPARGC1A-216ENST00000612355 FAM160B2Q86V87 743 aa11.75□□□□□ -0.53
PPARGC1A-216ENST00000612355 FTSJ3Q8IY81 847 aaKnown RBP11.75□□□□□ -0.53
PPARGC1A-216ENST00000612355 KIF1BPQ96EK5 621 aa11.75□□□□□ -0.53
PPARGC1A-216ENST00000612355 FBXL18Q96ME1 805 aa11.75□□□□□ -0.53
PPARGC1A-216ENST00000612355 TRERF1Q96PN7 1200 aa11.75□□□□□ -0.53
PPARGC1A-216ENST00000612355 HAUS7Q99871 368 aa11.75□□□□□ -0.53
PPARGC1A-216ENST00000612355 MTG1Q9BT17 334 aaPredicted RBP11.75□□□□□ -0.53
PPARGC1A-216ENST00000612355 MKNK2Q9HBH9 465 aa11.75□□□□□ -0.53
PPARGC1A-216ENST00000612355 ATG2AQ2TAZ0 1938 aa11.75□□□□□ -0.53
PPARGC1A-216ENST00000612355 FAM186AA6NE01 2351 aa11.75□□□□□ -0.53
PPARGC1A-216ENST00000612355 POTEB3A0JP26 581 aa11.74□□□□□ -0.53
PPARGC1A-216ENST00000612355 ZNF316A6NFI3 1004 aaPredicted RBP11.74□□□□□ -0.53
PPARGC1A-216ENST00000612355 GSG1L2A8MUP6 293 aa11.74□□□□□ -0.53
PPARGC1A-216ENST00000612355 TMEM232C9JQI7 657 aa11.74□□□□□ -0.53
PPARGC1A-216ENST00000612355 IFIT2P09913 472 aaKnown RBP11.74□□□□□ -0.53
PPARGC1A-216ENST00000612355 IL9P15248 144 aa11.74□□□□□ -0.53
PPARGC1A-216ENST00000612355 KCNJ6P48051 423 aa11.74□□□□□ -0.53
PPARGC1A-216ENST00000612355 NBPF20Q3BBV1 942 aa11.74□□□□□ -0.53
PPARGC1A-216ENST00000612355 SLFN13Q68D06 897 aa11.74□□□□□ -0.53
PPARGC1A-216ENST00000612355 POTEBQ6S5H4 581 aa11.74□□□□□ -0.53
PPARGC1A-216ENST00000612355 EEPD1Q7L9B9 569 aa11.74□□□□□ -0.53
PPARGC1A-216ENST00000612355 LRRC47Q8N1G4 583 aaKnown RBP11.74□□□□□ -0.53
PPARGC1A-216ENST00000612355 RETREG2Q8NC44 543 aa11.74□□□□□ -0.53
PPARGC1A-216ENST00000612355 CAGE1Q8TC20 777 aa11.74□□□□□ -0.53
PPARGC1A-216ENST00000612355 NEK9Q8TD19 979 aa11.74□□□□□ -0.53
PPARGC1A-216ENST00000612355 GMCL1Q96IK5 515 aa11.74□□□□□ -0.53
PPARGC1A-216ENST00000612355 STRBPQ96SI9 672 aaKnown RBP11.74□□□□□ -0.53
PPARGC1A-216ENST00000612355 FTOQ9C0B1 505 aaKnown RBP eCLIP11.74□□□□□ -0.53
PPARGC1A-216ENST00000612355 SUGCTQ9HAC7 445 aa11.74□□□□□ -0.53
PPARGC1A-216ENST00000612355 NLRC5Q86WI3 1866 aa11.74□□□□□ -0.53
PPARGC1A-216ENST00000612355 GRXCR2A6NFK2 248 aa11.73□□□□□ -0.53
PPARGC1A-216ENST00000612355 A6NJR5 290 aa11.73□□□□□ -0.53
PPARGC1A-216ENST00000612355 DCXO43602 365 aa11.73□□□□□ -0.53
PPARGC1A-216ENST00000612355 GJB5O95377 273 aa11.73□□□□□ -0.53
PPARGC1A-216ENST00000612355 KCNA5P22460 613 aa11.73□□□□□ -0.53
PPARGC1A-216ENST00000612355 SSTR3P32745 418 aaPredicted RBP11.73□□□□□ -0.53
PPARGC1A-216ENST00000612355 RBL2Q08999 1139 aa11.73□□□□□ -0.53
PPARGC1A-216ENST00000612355 COL4A6Q14031 1691 aa11.73□□□□□ -0.53
PPARGC1A-216ENST00000612355 GPNMBQ14956 572 aa11.73□□□□□ -0.53
PPARGC1A-216ENST00000612355 CSPP1Q1MSJ5 1256 aa11.73□□□□□ -0.53
PPARGC1A-216ENST00000612355 PUS10Q3MIT2 529 aaKnown RBP11.73□□□□□ -0.53
PPARGC1A-216ENST00000612355 MUM1L1Q5H9M0 696 aa11.73□□□□□ -0.53
PPARGC1A-216ENST00000612355 PTCRAQ6ISU1 281 aaPredicted RBP11.73□□□□□ -0.53
PPARGC1A-216ENST00000612355 ZSCAN25Q6NSZ9 544 aa11.73□□□□□ -0.53
PPARGC1A-216ENST00000612355 AFAP1L1Q8TED9 768 aa11.73□□□□□ -0.53
PPARGC1A-216ENST00000612355 CHURC1Q8WUH1 139 aa11.73□□□□□ -0.53
PPARGC1A-216ENST00000612355 STAG1Q8WVM7 1258 aa11.73□□□□□ -0.53
PPARGC1A-216ENST00000612355 TGS1Q96RS0 853 aaKnown RBP11.73□□□□□ -0.53
PPARGC1A-216ENST00000612355 CTAGE1Q96RT6 745 aa11.73□□□□□ -0.53
PPARGC1A-216ENST00000612355 WDR11Q9BZH6 1224 aa11.73□□□□□ -0.53
PPARGC1A-216ENST00000612355 BOLA2Q9H3K6 86 aa11.73□□□□□ -0.53
PPARGC1A-216ENST00000612355 ZNF287Q9HBT7 754 aa11.73□□□□□ -0.53
PPARGC1A-216ENST00000612355 GVINP1Q7Z2Y8 2422 aa11.72□□□□□ -0.53
PPARGC1A-216ENST00000612355 RAD50Q92878 1312 aa11.72□□□□□ -0.53
PPARGC1A-216ENST00000612355 LINC01553A4QN01 128 aa11.72□□□□□ -0.53
PPARGC1A-216ENST00000612355 NKRFO15226 690 aaKnown RBP eCLIP11.72□□□□□ -0.53
PPARGC1A-216ENST00000612355 KPNA6O60684 536 aa11.72□□□□□ -0.53
PPARGC1A-216ENST00000612355 PARNO95453 639 aaKnown RBP11.72□□□□□ -0.53
PPARGC1A-216ENST00000612355 CXCL10P02778 98 aa11.72□□□□□ -0.53
PPARGC1A-216ENST00000612355 MYL3P08590 195 aa11.72□□□□□ -0.53
PPARGC1A-216ENST00000612355 ALAS1P13196 640 aa11.72□□□□□ -0.53
PPARGC1A-216ENST00000612355 ALDH5A1P51649 535 aaPredicted RBP11.72□□□□□ -0.53
PPARGC1A-216ENST00000612355 DEFB103AP81534 67 aa11.72□□□□□ -0.53
PPARGC1A-216ENST00000612355 COL19A1Q14993 1142 aa11.72□□□□□ -0.53
PPARGC1A-216ENST00000612355 FAM47CQ5HY64 1035 aa11.72□□□□□ -0.53
PPARGC1A-216ENST00000612355 CNKSR3Q6P9H4 555 aa11.72□□□□□ -0.53
PPARGC1A-216ENST00000612355 NEDD1Q8NHV4 660 aa11.72□□□□□ -0.53
PPARGC1A-216ENST00000612355 RAD9AQ99638 391 aa11.72□□□□□ -0.53
PPARGC1A-216ENST00000612355 EPB41L4AQ9HCS5 686 aaPredicted RBP11.72□□□□□ -0.53
PPARGC1A-216ENST00000612355 GPHNQ9NQX3 736 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms