RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 U2AF1L4Q8WU68 220 aaKnown RBP9.98□□□□□ -0.81
COL25A1-208ENST00000610288 USP6NLQ92738 828 aa9.98□□□□□ -0.81
COL25A1-208ENST00000610288 FNBP1Q96RU3 617 aa9.98□□□□□ -0.81
COL25A1-208ENST00000610288 NT5C3AQ9H0P0 336 aa9.98□□□□□ -0.81
COL25A1-208ENST00000610288 PPP1R9AQ9ULJ8 1098 aa9.98□□□□□ -0.81
COL25A1-208ENST00000610288 CTSWP56202 376 aa9.98□□□□□ -0.81
COL25A1-208ENST00000610288 RASSF7Q02833 373 aa9.98□□□□□ -0.81
COL25A1-208ENST00000610288 PPARAQ07869 468 aa9.98□□□□□ -0.81
COL25A1-208ENST00000610288 FAM47AQ5JRC9 791 aa9.98□□□□□ -0.81
COL25A1-208ENST00000610288 ZNF354CQ86Y25 554 aa9.98□□□□□ -0.81
COL25A1-208ENST00000610288 DHX40Q8IX18 779 aaKnown RBP9.98□□□□□ -0.81
COL25A1-208ENST00000610288 RASSF10A6NK89 507 aa9.98□□□□□ -0.81
COL25A1-208ENST00000610288 USP17L12C9JPN9 530 aa9.98□□□□□ -0.81
COL25A1-208ENST00000610288 USP17L21D6R901 530 aa9.98□□□□□ -0.81
COL25A1-208ENST00000610288 TRIM37O94972 964 aa9.98□□□□□ -0.81
COL25A1-208ENST00000610288 SMTNP53814 917 aa9.98□□□□□ -0.81
COL25A1-208ENST00000610288 RPS8P62241 208 aaKnown RBP9.98□□□□□ -0.81
COL25A1-208ENST00000610288 TMED1Q13445 227 aa9.98□□□□□ -0.81
COL25A1-208ENST00000610288 CALCRLQ16602 461 aa9.98□□□□□ -0.81
COL25A1-208ENST00000610288 MAP3K21Q5TCX8 1036 aa9.98□□□□□ -0.81
COL25A1-208ENST00000610288 TGFBRAP1Q8WUH2 860 aa9.98□□□□□ -0.81
COL25A1-208ENST00000610288 RNF26Q9BY78 433 aaPredicted RBP9.98□□□□□ -0.81
COL25A1-208ENST00000610288 ALDH8A1Q9H2A2 487 aaPredicted RBP9.98□□□□□ -0.81
COL25A1-208ENST00000610288 VIPAS39Q9H9C1 493 aa9.98□□□□□ -0.81
COL25A1-208ENST00000610288 TYW1Q9NV66 732 aaKnown RBP9.98□□□□□ -0.81
COL25A1-208ENST00000610288 SRPRBQ9Y5M8 271 aaKnown RBP9.98□□□□□ -0.81
COL25A1-208ENST00000610288 ADGRG1Q9Y653 693 aa9.98□□□□□ -0.81
COL25A1-208ENST00000610288 ARHGEF35A5YM69 484 aa9.98□□□□□ -0.81
COL25A1-208ENST00000610288 PGRMC1O00264 195 aaKnown RBP9.98□□□□□ -0.81
COL25A1-208ENST00000610288 TXNDC9O14530 226 aa9.98□□□□□ -0.81
COL25A1-208ENST00000610288 KRT5P13647 590 aa9.98□□□□□ -0.81
COL25A1-208ENST00000610288 SESN3P58005 492 aa9.98□□□□□ -0.81
COL25A1-208ENST00000610288 ZYXQ15942 572 aaKnown RBP9.98□□□□□ -0.81
COL25A1-208ENST00000610288 WDR44Q5JSH3 913 aa9.98□□□□□ -0.81
COL25A1-208ENST00000610288 LGSNQ5TDP6 509 aa9.98□□□□□ -0.81
COL25A1-208ENST00000610288 LIN9Q5TKA1 542 aa9.98□□□□□ -0.81
COL25A1-208ENST00000610288 NELFCDQ8IXH7 590 aa9.98□□□□□ -0.81
COL25A1-208ENST00000610288 FMNL1O95466 1100 aaPredicted RBP9.97□□□□□ -0.81
COL25A1-208ENST00000610288 GGCXP38435 758 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 GALNT17Q6IS24 598 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 DPP8Q6V1X1 898 aaPredicted RBP9.97□□□□□ -0.81
COL25A1-208ENST00000610288 IFNL3Q8IZI9 196 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 SMC1BQ8NDV3 1235 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 COG1Q8WTW3 980 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 CENPKQ9BS16 269 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 GOLPH3LQ9H4A5 285 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 Q9H521 79 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 BCAP29Q9UHQ4 241 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 CFAP65Q6ZU64 1925 aaKnown RBP9.97□□□□□ -0.81
COL25A1-208ENST00000610288 XRCC5P13010 732 aaKnown RBP9.97□□□□□ -0.81
COL25A1-208ENST00000610288 PDE6AP16499 860 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 IFNAR2P48551 515 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 POLR2FP61218 127 aaKnown RBP9.97□□□□□ -0.81
COL25A1-208ENST00000610288 GNPTABQ3T906 1256 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 REXO1Q8N1G1 1221 aaKnown RBP9.97□□□□□ -0.81
COL25A1-208ENST00000610288 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.97□□□□□ -0.81
COL25A1-208ENST00000610288 PBKQ96KB5 322 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 TLR7Q9NYK1 1049 aaKnown RBP9.97□□□□□ -0.81
COL25A1-208ENST00000610288 TRPM1Q7Z4N2 1603 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 RXRBP28702 533 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 USP14P54578 494 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 CORO7P57737 925 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 RNASELQ05823 741 aaKnown RBP9.97□□□□□ -0.81
COL25A1-208ENST00000610288 CUL1Q13616 776 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 RESP18Q5W5W9 173 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 NYAP1Q6ZVC0 841 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 APBB1IPQ7Z5R6 666 aaPredicted RBP9.97□□□□□ -0.81
COL25A1-208ENST00000610288 CCDC13Q8IYE1 715 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 GRK7Q8WTQ7 553 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 ARMCX3Q9UH62 379 aaPredicted RBP9.97□□□□□ -0.81
COL25A1-208ENST00000610288 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.97□□□□□ -0.81
COL25A1-208ENST00000610288 IFNAR1P17181 557 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 HSPA1LP34931 641 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 UBE3CQ15386 1083 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 MORC4Q8TE76 937 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 P2RX5Q93086 422 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 VTI1AQ96AJ9 217 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 UIMC1Q96RL1 719 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 EPC1Q9H2F5 836 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 THAP9Q9H5L6 903 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 NHEJ1Q9H9Q4 299 aaPredicted RBP9.97□□□□□ -0.81
COL25A1-208ENST00000610288 KLC4Q9NSK0 619 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 TBC1D7Q9P0N9 293 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 TRPC5Q9UL62 973 aaPredicted RBP9.97□□□□□ -0.81
COL25A1-208ENST00000610288 DNM3Q9UQ16 869 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 DAAM1Q9Y4D1 1078 aa9.97□□□□□ -0.81
COL25A1-208ENST00000610288 TMEM94Q12767 1356 aa9.96□□□□□ -0.81
COL25A1-208ENST00000610288 RPAP1Q9BWH6 1393 aaPredicted RBP9.96□□□□□ -0.81
COL25A1-208ENST00000610288 TMEM232C9JQI7 657 aa9.96□□□□□ -0.81
COL25A1-208ENST00000610288 MMP1P03956 469 aa9.96□□□□□ -0.81
COL25A1-208ENST00000610288 SCG2P13521 617 aa9.96□□□□□ -0.81
COL25A1-208ENST00000610288 IL9RQ01113 521 aa9.96□□□□□ -0.81
COL25A1-208ENST00000610288 MAN2A1Q16706 1144 aa9.96□□□□□ -0.81
COL25A1-208ENST00000610288 LRRC24Q50LG9 513 aa9.96□□□□□ -0.81
COL25A1-208ENST00000610288 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.96□□□□□ -0.81
COL25A1-208ENST00000610288 TNKSO95271 1327 aa9.96□□□□□ -0.81
COL25A1-208ENST00000610288 PASKQ96RG2 1323 aa9.96□□□□□ -0.81
COL25A1-208ENST00000610288 TARSL2A2RTX5 802 aaKnown RBP9.96□□□□□ -0.82
COL25A1-208ENST00000610288 KRT31Q15323 416 aa9.96□□□□□ -0.82
COL25A1-208ENST00000610288 SMYD4Q8IYR2 804 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms