RNA–Protein interactions for RNA: ENST00000609959.1

CCDC144B-206, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 5

Gene CCDC144B, Length 808 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-206ENST00000609959 GDF5P43026 501 aa5.76□□□□□ -1.49
CCDC144B-206ENST00000609959 CACNB2Q08289 660 aaPredicted RBP5.76□□□□□ -1.49
CCDC144B-206ENST00000609959 BORAQ6PGQ7 559 aa5.76□□□□□ -1.49
CCDC144B-206ENST00000609959 ZNF761Q86XN6 746 aaPredicted RBP5.76□□□□□ -1.49
CCDC144B-206ENST00000609959 SMARCC2Q8TAQ2 1214 aa5.76□□□□□ -1.49
CCDC144B-206ENST00000609959 RNF34Q969K3 372 aa5.76□□□□□ -1.49
CCDC144B-206ENST00000609959 ZBTB8AQ96BR9 441 aa5.76□□□□□ -1.49
CCDC144B-206ENST00000609959 FCRL3Q96P31 734 aaPredicted RBP5.76□□□□□ -1.49
CCDC144B-206ENST00000609959 SORCS2Q96PQ0 1159 aa5.76□□□□□ -1.49
CCDC144B-206ENST00000609959 GP6Q9HCN6 339 aa5.76□□□□□ -1.49
CCDC144B-206ENST00000609959 GGT7Q9UJ14 662 aa5.76□□□□□ -1.49
CCDC144B-206ENST00000609959 C9IYK1 514 aa5.75□□□□□ -1.49
CCDC144B-206ENST00000609959 ITGA4P13612 1032 aa5.75□□□□□ -1.49
CCDC144B-206ENST00000609959 ZNF20P17024 532 aa5.75□□□□□ -1.49
CCDC144B-206ENST00000609959 ZNF445P59923 1031 aa5.75□□□□□ -1.49
CCDC144B-206ENST00000609959 SLITRK4Q8IW52 837 aa5.75□□□□□ -1.49
CCDC144B-206ENST00000609959 LGI4Q8N135 537 aa5.75□□□□□ -1.49
CCDC144B-206ENST00000609959 FIBCD1Q8N539 461 aa5.75□□□□□ -1.49
CCDC144B-206ENST00000609959 LZTR1Q8N653 840 aa5.75□□□□□ -1.49
CCDC144B-206ENST00000609959 NETO2Q8NC67 525 aa5.75□□□□□ -1.49
CCDC144B-206ENST00000609959 BRF1Q92994 677 aa5.75□□□□□ -1.49
CCDC144B-206ENST00000609959 C8orf49Q96NF6 230 aa5.75□□□□□ -1.49
CCDC144B-206ENST00000609959 NT5C1AQ9BXI3 368 aa5.75□□□□□ -1.49
CCDC144B-206ENST00000609959 PLA2G2DQ9UNK4 145 aa5.75□□□□□ -1.49
CCDC144B-206ENST00000609959 A0A087WZG4 1122 aa5.74□□□□□ -1.49
CCDC144B-206ENST00000609959 FAM86C2PA6NEL3 165 aa5.74□□□□□ -1.49
CCDC144B-206ENST00000609959 SHOXO15266 292 aa5.74□□□□□ -1.49
CCDC144B-206ENST00000609959 CD3EP07766 207 aa5.74□□□□□ -1.49
CCDC144B-206ENST00000609959 ERCC3P19447 782 aa5.74□□□□□ -1.49
CCDC144B-206ENST00000609959 CD247P20963 164 aa5.74□□□□□ -1.49
CCDC144B-206ENST00000609959 HMGA2P52926 109 aa5.74□□□□□ -1.49
CCDC144B-206ENST00000609959 TCEAL1Q15170 157 aa5.74□□□□□ -1.49
CCDC144B-206ENST00000609959 EEF1DP3Q658K8 133 aa5.74□□□□□ -1.49
CCDC144B-206ENST00000609959 GLB1LQ6UWU2 654 aa5.74□□□□□ -1.49
CCDC144B-206ENST00000609959 TAB3Q8N5C8 712 aaPredicted RBP5.74□□□□□ -1.49
CCDC144B-206ENST00000609959 ADAMTS17Q8TE56 1095 aa5.74□□□□□ -1.49
CCDC144B-206ENST00000609959 DVL3Q92997 716 aaPredicted RBP5.74□□□□□ -1.49
CCDC144B-206ENST00000609959 ADAMTS1Q9UHI8 967 aa5.74□□□□□ -1.49
CCDC144B-206ENST00000609959 DIS3Q9Y2L1 958 aaKnown RBP5.74□□□□□ -1.49
CCDC144B-206ENST00000609959 ZNF536O15090 1300 aa5.74□□□□□ -1.49
CCDC144B-206ENST00000609959 CYP2C8P10632 490 aa5.73□□□□□ -1.49
CCDC144B-206ENST00000609959 TBC1D10BQ4KMP7 808 aaPredicted RBP5.73□□□□□ -1.49
CCDC144B-206ENST00000609959 TDRD10Q5VZ19 366 aaKnown RBP5.73□□□□□ -1.49
CCDC144B-206ENST00000609959 DCAF15Q66K64 600 aa5.73□□□□□ -1.49
CCDC144B-206ENST00000609959 USP33Q8TEY7 942 aa5.73□□□□□ -1.49
CCDC144B-206ENST00000609959 TM9SF2Q99805 663 aa5.73□□□□□ -1.49
CCDC144B-206ENST00000609959 NOL6Q9H6R4 1146 aaKnown RBP5.73□□□□□ -1.49
CCDC144B-206ENST00000609959 SPATA6Q9NWH7 488 aaPredicted RBP5.73□□□□□ -1.49
CCDC144B-206ENST00000609959 RGL3Q3MIN7 710 aa5.72□□□□□ -1.49
CCDC144B-206ENST00000609959 FAM26FQ5R3K3 315 aa5.72□□□□□ -1.49
CCDC144B-206ENST00000609959 AXDND1Q5T1B0 1012 aaPredicted RBP5.72□□□□□ -1.49
CCDC144B-206ENST00000609959 RCSD1Q6JBY9 416 aa5.72□□□□□ -1.49
CCDC144B-206ENST00000609959 USP51Q70EK9 711 aa5.72□□□□□ -1.49
CCDC144B-206ENST00000609959 LINC00482Q8N8I6 264 aa5.72□□□□□ -1.49
CCDC144B-206ENST00000609959 KISS1RQ969F8 398 aaPredicted RBP5.72□□□□□ -1.49
CCDC144B-206ENST00000609959 NOX5Q96PH1 765 aa5.72□□□□□ -1.49
CCDC144B-206ENST00000609959 GZF1Q9H116 711 aaPredicted RBP5.72□□□□□ -1.49
CCDC144B-206ENST00000609959 TRBV23OR9-2A0A075B6M9 112 aa5.71□□□□□ -1.5
CCDC144B-206ENST00000609959 TP53P04637 393 aaPredicted RBP5.71□□□□□ -1.5
CCDC144B-206ENST00000609959 ACRP10323 421 aa5.71□□□□□ -1.5
CCDC144B-206ENST00000609959 C6P13671 934 aa5.71□□□□□ -1.5
CCDC144B-206ENST00000609959 IFNGR1P15260 489 aa5.71□□□□□ -1.5
CCDC144B-206ENST00000609959 SURF1Q15526 300 aa5.71□□□□□ -1.5
CCDC144B-206ENST00000609959 ZDHHC15Q96MV8 337 aa5.71□□□□□ -1.5
CCDC144B-206ENST00000609959 CDK5RAP1Q96SZ6 601 aaKnown RBP5.71□□□□□ -1.5
CCDC144B-206ENST00000609959 RXFP1Q9HBX9 757 aa5.71□□□□□ -1.5
CCDC144B-206ENST00000609959 ZNRF3Q9ULT6 936 aa5.71□□□□□ -1.5
CCDC144B-206ENST00000609959 MROH6A6NGR9 719 aa5.7□□□□□ -1.5
CCDC144B-206ENST00000609959 CYR61O00622 381 aa5.7□□□□□ -1.5
CCDC144B-206ENST00000609959 TACR2P21452 398 aa5.7□□□□□ -1.5
CCDC144B-206ENST00000609959 RPL13P26373 211 aaKnown RBP5.7□□□□□ -1.5
CCDC144B-206ENST00000609959 SEPHS1P49903 392 aa5.7□□□□□ -1.5
CCDC144B-206ENST00000609959 SMAD4Q13485 552 aaKnown RBP5.7□□□□□ -1.5
CCDC144B-206ENST00000609959 CCDC27Q2M243 656 aa5.7□□□□□ -1.5
CCDC144B-206ENST00000609959 KIAA0825Q8IV33 1275 aa5.7□□□□□ -1.5
CCDC144B-206ENST00000609959 DDX11Q96FC9 970 aa5.7□□□□□ -1.5
CCDC144B-206ENST00000609959 FERD3LQ96RJ6 166 aa5.7□□□□□ -1.5
CCDC144B-206ENST00000609959 KRTAP3-1Q9BYR8 98 aa5.7□□□□□ -1.5
CCDC144B-206ENST00000609959 BCAS3Q9H6U6 928 aa5.7□□□□□ -1.5
CCDC144B-206ENST00000609959 INVSQ9Y283 1065 aa5.7□□□□□ -1.5
CCDC144B-206ENST00000609959 RWDD3Q9Y3V2 267 aa5.7□□□□□ -1.5
CCDC144B-206ENST00000609959 ZNF451Q9Y4E5 1061 aa5.7□□□□□ -1.5
CCDC144B-206ENST00000609959 WWC2Q6AWC2 1192 aa5.69□□□□□ -1.5
CCDC144B-206ENST00000609959 PPFIBP1Q86W92 1011 aa5.69□□□□□ -1.5
CCDC144B-206ENST00000609959 TTLL6Q8N841 843 aa5.69□□□□□ -1.5
CCDC144B-206ENST00000609959 C11orf84Q9BUA3 381 aaPredicted RBP5.69□□□□□ -1.5
CCDC144B-206ENST00000609959 SPON2Q9BUD6 331 aa5.69□□□□□ -1.5
CCDC144B-206ENST00000609959 MRIQ9BWK5 157 aa5.69□□□□□ -1.5
CCDC144B-206ENST00000609959 OVOL3O00110 214 aa5.68□□□□□ -1.5
CCDC144B-206ENST00000609959 AURKAO14965 403 aa5.68□□□□□ -1.5
CCDC144B-206ENST00000609959 PPP2R5DQ14738 602 aa5.68□□□□□ -1.5
CCDC144B-206ENST00000609959 PLEKHH3Q7Z736 793 aa5.68□□□□□ -1.5
CCDC144B-206ENST00000609959 ZC3H18Q86VM9 953 aaKnown RBP5.68□□□□□ -1.5
CCDC144B-206ENST00000609959 KYQ8NBH2 561 aa5.68□□□□□ -1.5
CCDC144B-206ENST00000609959 SH3RF3Q8TEJ3 882 aaPredicted RBP5.68□□□□□ -1.5
CCDC144B-206ENST00000609959 GBP3Q9H0R5 595 aa5.68□□□□□ -1.5
CCDC144B-206ENST00000609959 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.68□□□□□ -1.5
CCDC144B-206ENST00000609959 WHRNQ9P202 907 aa5.68□□□□□ -1.5
CCDC144B-206ENST00000609959 TSC22D4Q9Y3Q8 395 aa5.68□□□□□ -1.5
CCDC144B-206ENST00000609959 NPHS1O60500 1241 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms