RNA–Protein interactions for RNA: ENST00000609099.1

LINC01396-201, Transcript of long intergenic non-protein coding RNA 1396, humanhuman

TSL 3 BASIC

Gene LINC01396, Length 527 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01396-201ENST00000609099 SMAD2Q15796 467 aaKnown RBP9.93□□□□□ -0.82
LINC01396-201ENST00000609099 RIOX2Q8IUF8 465 aa9.93□□□□□ -0.82
LINC01396-201ENST00000609099 SPICE1Q8N0Z3 855 aa9.93□□□□□ -0.82
LINC01396-201ENST00000609099 MRPL38Q96DV4 380 aaKnown RBP9.93□□□□□ -0.82
LINC01396-201ENST00000609099 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.93□□□□□ -0.82
LINC01396-201ENST00000609099 RALYQ9UKM9 306 aaKnown RBP9.93□□□□□ -0.82
LINC01396-201ENST00000609099 GNEQ9Y223 722 aaKnown RBP9.93□□□□□ -0.82
LINC01396-201ENST00000609099 GREB1LQ9C091 1923 aaPredicted RBP9.92□□□□□ -0.82
LINC01396-201ENST00000609099 BAIAP3O94812 1187 aa9.92□□□□□ -0.82
LINC01396-201ENST00000609099 PDGFBP01127 241 aaPredicted RBP9.92□□□□□ -0.82
LINC01396-201ENST00000609099 ACVR2BQ13705 512 aa9.92□□□□□ -0.82
LINC01396-201ENST00000609099 ABCB5Q2M3G0 1257 aa9.92□□□□□ -0.82
LINC01396-201ENST00000609099 RETREG2Q8NC44 543 aa9.92□□□□□ -0.82
LINC01396-201ENST00000609099 ASIC4Q96FT7 647 aa9.92□□□□□ -0.82
LINC01396-201ENST00000609099 C17orf80Q9BSJ5 609 aa9.92□□□□□ -0.82
LINC01396-201ENST00000609099 EHD4Q9H223 541 aa9.92□□□□□ -0.82
LINC01396-201ENST00000609099 ALDH8A1Q9H2A2 487 aaPredicted RBP9.92□□□□□ -0.82
LINC01396-201ENST00000609099 PIH1D3Q9NQM4 214 aaKnown RBP9.92□□□□□ -0.82
LINC01396-201ENST00000609099 CLDND1Q9NY35 253 aa9.92□□□□□ -0.82
LINC01396-201ENST00000609099 RAI14Q9P0K7 980 aa9.92□□□□□ -0.82
LINC01396-201ENST00000609099 NLRC5Q86WI3 1866 aa9.91□□□□□ -0.82
LINC01396-201ENST00000609099 TNKSO95271 1327 aa9.91□□□□□ -0.82
LINC01396-201ENST00000609099 FLOT1O75955 427 aa9.91□□□□□ -0.82
LINC01396-201ENST00000609099 CYP2E1P05181 493 aaPredicted RBP9.91□□□□□ -0.82
LINC01396-201ENST00000609099 HLA-DOAP06340 250 aa9.91□□□□□ -0.82
LINC01396-201ENST00000609099 IL15P40933 162 aaPredicted RBP9.91□□□□□ -0.82
LINC01396-201ENST00000609099 WDR5P61964 334 aaKnown RBP9.91□□□□□ -0.82
LINC01396-201ENST00000609099 CERKLQ49MI3 558 aaPredicted RBP9.91□□□□□ -0.82
LINC01396-201ENST00000609099 FRMD5Q7Z6J6 570 aa9.91□□□□□ -0.82
LINC01396-201ENST00000609099 MRPL50Q8N5N7 158 aaKnown RBP9.91□□□□□ -0.82
LINC01396-201ENST00000609099 BANK1Q8NDB2 785 aa9.91□□□□□ -0.82
LINC01396-201ENST00000609099 FBXO22Q8NEZ5 403 aa9.91□□□□□ -0.82
LINC01396-201ENST00000609099 CHAMP1Q96JM3 812 aa9.91□□□□□ -0.82
LINC01396-201ENST00000609099 RAD9AQ99638 391 aa9.91□□□□□ -0.82
LINC01396-201ENST00000609099 CABP5Q9NP86 173 aa9.91□□□□□ -0.82
LINC01396-201ENST00000609099 COPRSQ9NQ92 184 aa9.91□□□□□ -0.82
LINC01396-201ENST00000609099 SNRKQ9NRH2 765 aa9.91□□□□□ -0.82
LINC01396-201ENST00000609099 MICAL3Q7RTP6 2002 aa9.9□□□□□ -0.82
LINC01396-201ENST00000609099 VWA5AO00534 786 aa9.9□□□□□ -0.82
LINC01396-201ENST00000609099 BAG3O95817 575 aa9.9□□□□□ -0.82
LINC01396-201ENST00000609099 CYP2D6P10635 497 aa9.9□□□□□ -0.82
LINC01396-201ENST00000609099 TCEAL5Q5H9L2 206 aa9.9□□□□□ -0.82
LINC01396-201ENST00000609099 NOL8Q76FK4 1167 aaKnown RBP9.9□□□□□ -0.82
LINC01396-201ENST00000609099 KCNG4Q8TDN1 519 aa9.9□□□□□ -0.82
LINC01396-201ENST00000609099 PDGFCQ9NRA1 345 aa9.9□□□□□ -0.82
LINC01396-201ENST00000609099 SERPINB13Q9UIV8 391 aa9.9□□□□□ -0.82
LINC01396-201ENST00000609099 MYH8P13535 1937 aa9.9□□□□□ -0.83
LINC01396-201ENST00000609099 FAM208BQ5VWN6 2430 aa9.9□□□□□ -0.83
LINC01396-201ENST00000609099 MBTPS2O43462 519 aa9.89□□□□□ -0.83
LINC01396-201ENST00000609099 TBX10O75333 385 aa9.89□□□□□ -0.83
LINC01396-201ENST00000609099 SMPD1P17405 629 aa9.89□□□□□ -0.83
LINC01396-201ENST00000609099 GTF2F1P35269 517 aaKnown RBP eCLIP9.89□□□□□ -0.83
LINC01396-201ENST00000609099 COPB2P35606 906 aa9.89□□□□□ -0.83
LINC01396-201ENST00000609099 CNTN2Q02246 1040 aa9.89□□□□□ -0.83
LINC01396-201ENST00000609099 CLUL1Q15846 466 aa9.89□□□□□ -0.83
LINC01396-201ENST00000609099 CTC1Q2NKJ3 1217 aa9.89□□□□□ -0.83
LINC01396-201ENST00000609099 NAA16Q6N069 864 aaPredicted RBP9.89□□□□□ -0.83
LINC01396-201ENST00000609099 ARMCX2Q7L311 632 aa9.89□□□□□ -0.83
LINC01396-201ENST00000609099 MIGA1Q8NAN2 632 aa9.89□□□□□ -0.83
LINC01396-201ENST00000609099 NSUN3Q9H649 340 aaKnown RBP9.89□□□□□ -0.83
LINC01396-201ENST00000609099 CEP295Q9C0D2 2601 aa9.89□□□□□ -0.83
LINC01396-201ENST00000609099 NBEAQ8NFP9 2946 aa9.89□□□□□ -0.83
LINC01396-201ENST00000609099 IQCF3P0C7M6 154 aa9.88□□□□□ -0.83
LINC01396-201ENST00000609099 LINC00271P0C7V0 271 aa9.88□□□□□ -0.83
LINC01396-201ENST00000609099 HOXB3P14651 431 aaPredicted RBP9.88□□□□□ -0.83
LINC01396-201ENST00000609099 AKR1B1P15121 316 aa9.88□□□□□ -0.83
LINC01396-201ENST00000609099 SMAD4Q13485 552 aaKnown RBP9.88□□□□□ -0.83
LINC01396-201ENST00000609099 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.88□□□□□ -0.83
LINC01396-201ENST00000609099 CCDC144CPQ8IYA2 1237 aa9.88□□□□□ -0.83
LINC01396-201ENST00000609099 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.88□□□□□ -0.83
LINC01396-201ENST00000609099 DHX38Q92620 1227 aaKnown RBP9.88□□□□□ -0.83
LINC01396-201ENST00000609099 DDX11Q96FC9 970 aa9.88□□□□□ -0.83
LINC01396-201ENST00000609099 AP5M1Q9H0R1 490 aa9.88□□□□□ -0.83
LINC01396-201ENST00000609099 ABHD16BQ9H3Z7 469 aa9.88□□□□□ -0.83
LINC01396-201ENST00000609099 PPP1R9AQ9ULJ8 1098 aa9.88□□□□□ -0.83
LINC01396-201ENST00000609099 BOLA1Q9Y3E2 137 aa9.88□□□□□ -0.83
LINC01396-201ENST00000609099 BAZ2AQ9UIF9 1905 aaKnown RBP9.88□□□□□ -0.83
LINC01396-201ENST00000609099 LINC01565O15544 149 aa9.87□□□□□ -0.83
LINC01396-201ENST00000609099 GJB5O95377 273 aa9.87□□□□□ -0.83
LINC01396-201ENST00000609099 SDHBP21912 280 aa9.87□□□□□ -0.83
LINC01396-201ENST00000609099 STAT3P40763 770 aa9.87□□□□□ -0.83
LINC01396-201ENST00000609099 FSCN1Q16658 493 aaKnown RBP9.87□□□□□ -0.83
LINC01396-201ENST00000609099 TAPT1Q6NXT6 567 aa9.87□□□□□ -0.83
LINC01396-201ENST00000609099 TRAF7Q6Q0C0 670 aa9.87□□□□□ -0.83
LINC01396-201ENST00000609099 RPAINQ86UA6 219 aa9.87□□□□□ -0.83
LINC01396-201ENST00000609099 TLK2Q86UE8 772 aa9.87□□□□□ -0.83
LINC01396-201ENST00000609099 IFNLR1Q8IU57 520 aaPredicted RBP9.87□□□□□ -0.83
LINC01396-201ENST00000609099 KIAA2013Q8IYS2 634 aa9.87□□□□□ -0.83
LINC01396-201ENST00000609099 SAMD11Q96NU1 681 aa9.87□□□□□ -0.83
LINC01396-201ENST00000609099 NUP88Q99567 741 aaPredicted RBP9.87□□□□□ -0.83
LINC01396-201ENST00000609099 VCPKMTQ9H867 229 aa9.87□□□□□ -0.83
LINC01396-201ENST00000609099 PRKRIP1Q9H875 184 aaPredicted RBP9.87□□□□□ -0.83
LINC01396-201ENST00000609099 TMX2Q9Y320 296 aa9.87□□□□□ -0.83
LINC01396-201ENST00000609099 LOC400499M0QZD8 3231 aa9.87□□□□□ -0.83
LINC01396-201ENST00000609099 GCN1Q92616 2671 aaKnown RBP9.87□□□□□ -0.83
LINC01396-201ENST00000609099 NBNO60934 754 aa9.86□□□□□ -0.83
LINC01396-201ENST00000609099 BFSP2Q13515 415 aa9.86□□□□□ -0.83
LINC01396-201ENST00000609099 MBTPS1Q14703 1052 aa9.86□□□□□ -0.83
LINC01396-201ENST00000609099 MVPQ14764 893 aaKnown RBP9.86□□□□□ -0.83
LINC01396-201ENST00000609099 MAGEB6Q8N7X4 407 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms