RNA–Protein interactions for RNA: ENST00000608945.1

ITGB5-213, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 267 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-213ENST00000608945 LRRC14Q15048 493 aa3.15□□□□□ -1.91
ITGB5-213ENST00000608945 SCARA3Q6AZY7 606 aa3.15□□□□□ -1.91
ITGB5-213ENST00000608945 MBD6Q96DN6 1003 aa3.15□□□□□ -1.91
ITGB5-213ENST00000608945 IMPACTQ9P2X3 320 aa3.15□□□□□ -1.91
ITGB5-213ENST00000608945 NOTCH2Q04721 2471 aa3.15□□□□□ -1.91
ITGB5-213ENST00000608945 SRGAP3O43295 1099 aa3.14□□□□□ -1.91
ITGB5-213ENST00000608945 FBXO24O75426 580 aa3.14□□□□□ -1.91
ITGB5-213ENST00000608945 PROZP22891 400 aa3.14□□□□□ -1.91
ITGB5-213ENST00000608945 PMLP29590 882 aa3.14□□□□□ -1.91
ITGB5-213ENST00000608945 CCDC85BQ15834 202 aaPredicted RBP3.14□□□□□ -1.91
ITGB5-213ENST00000608945 SLFN13Q68D06 897 aa3.14□□□□□ -1.91
ITGB5-213ENST00000608945 LLGL2Q6P1M3 1020 aa3.14□□□□□ -1.91
ITGB5-213ENST00000608945 PAQR3Q6TCH7 311 aa3.14□□□□□ -1.91
ITGB5-213ENST00000608945 SV2BQ7L1I2 683 aa3.14□□□□□ -1.91
ITGB5-213ENST00000608945 TMC4Q7Z404 712 aa3.14□□□□□ -1.91
ITGB5-213ENST00000608945 ULK2Q8IYT8 1036 aa3.14□□□□□ -1.91
ITGB5-213ENST00000608945 C3orf58Q8NDZ4 430 aa3.14□□□□□ -1.91
ITGB5-213ENST00000608945 GPR150Q8NGU9 434 aa3.14□□□□□ -1.91
ITGB5-213ENST00000608945 ANKRD24Q8TF21 1146 aa3.14□□□□□ -1.91
ITGB5-213ENST00000608945 ZNF483Q8TF39 744 aaPredicted RBP3.14□□□□□ -1.91
ITGB5-213ENST00000608945 GIPC2Q8TF65 315 aa3.14□□□□□ -1.91
ITGB5-213ENST00000608945 LCORQ96JN0 433 aaPredicted RBP3.14□□□□□ -1.91
ITGB5-213ENST00000608945 BCAS3Q9H6U6 928 aa3.14□□□□□ -1.91
ITGB5-213ENST00000608945 VTI1BQ9UEU0 232 aa3.14□□□□□ -1.91
ITGB5-213ENST00000608945 CYP8B1Q9UNU6 501 aa3.14□□□□□ -1.91
ITGB5-213ENST00000608945 SETD1BQ9UPS6 1966 aaKnown RBP3.13□□□□□ -1.91
ITGB5-213ENST00000608945 ERVV-2B6SEH9 535 aa3.13□□□□□ -1.91
ITGB5-213ENST00000608945 FOXS1O43638 330 aa3.13□□□□□ -1.91
ITGB5-213ENST00000608945 SMARCA5O60264 1052 aaPredicted RBP3.13□□□□□ -1.91
ITGB5-213ENST00000608945 FKTNO75072 461 aa3.13□□□□□ -1.91
ITGB5-213ENST00000608945 CYBBP04839 570 aa3.13□□□□□ -1.91
ITGB5-213ENST00000608945 CDK8P49336 464 aa3.13□□□□□ -1.91
ITGB5-213ENST00000608945 PTPN11Q06124 597 aaPredicted RBP3.13□□□□□ -1.91
ITGB5-213ENST00000608945 SCRN1Q12765 414 aa3.13□□□□□ -1.91
ITGB5-213ENST00000608945 TAF1CQ15572 869 aaPredicted RBP3.13□□□□□ -1.91
ITGB5-213ENST00000608945 FBXO33Q7Z6M2 555 aa3.13□□□□□ -1.91
ITGB5-213ENST00000608945 FCRL2Q96LA5 508 aaPredicted RBP3.13□□□□□ -1.91
ITGB5-213ENST00000608945 TJP2Q9UDY2 1190 aa3.13□□□□□ -1.91
ITGB5-213ENST00000608945 ENC1O14682 589 aa3.12□□□□□ -1.91
ITGB5-213ENST00000608945 MAKP20794 623 aa3.12□□□□□ -1.91
ITGB5-213ENST00000608945 GRK4P32298 578 aa3.12□□□□□ -1.91
ITGB5-213ENST00000608945 ST13P50502 369 aaKnown RBP3.12□□□□□ -1.91
ITGB5-213ENST00000608945 TRIM26Q12899 539 aaPredicted RBP3.12□□□□□ -1.91
ITGB5-213ENST00000608945 TUBA3CQ13748 450 aa3.12□□□□□ -1.91
ITGB5-213ENST00000608945 PCNX4Q63HM2 1172 aa3.12□□□□□ -1.91
ITGB5-213ENST00000608945 TTBK2Q6IQ55 1244 aa3.12□□□□□ -1.91
ITGB5-213ENST00000608945 TUBA3EQ6PEY2 450 aa3.12□□□□□ -1.91
ITGB5-213ENST00000608945 MRPL41Q8IXM3 137 aaKnown RBP3.12□□□□□ -1.91
ITGB5-213ENST00000608945 IL17DQ8TAD2 202 aa3.12□□□□□ -1.91
ITGB5-213ENST00000608945 SCARB1Q8WTV0 552 aa3.12□□□□□ -1.91
ITGB5-213ENST00000608945 SMARCC1Q92922 1105 aaPredicted RBP3.12□□□□□ -1.91
ITGB5-213ENST00000608945 FAM161BQ96MY7 647 aa3.12□□□□□ -1.91
ITGB5-213ENST00000608945 PLEKHG4BQ96PX9 1271 aa3.12□□□□□ -1.91
ITGB5-213ENST00000608945 HDAC8Q9BY41 377 aa3.12□□□□□ -1.91
ITGB5-213ENST00000608945 TCFL5Q9UL49 500 aa3.12□□□□□ -1.91
ITGB5-213ENST00000608945 CCDC9Q9Y3X0 531 aaKnown RBP3.12□□□□□ -1.91
ITGB5-213ENST00000608945 CELA3AP09093 270 aa3.11□□□□□ -1.91
ITGB5-213ENST00000608945 RPS26P62854 115 aaKnown RBP3.11□□□□□ -1.91
ITGB5-213ENST00000608945 PWP1Q13610 501 aa3.11□□□□□ -1.91
ITGB5-213ENST00000608945 HS1BP3Q53T59 392 aa3.11□□□□□ -1.91
ITGB5-213ENST00000608945 PRR31Q5SQ13 230 aa3.11□□□□□ -1.91
ITGB5-213ENST00000608945 PKN3Q6P5Z2 889 aa3.11□□□□□ -1.91
ITGB5-213ENST00000608945 ZNF366Q8N895 744 aa3.11□□□□□ -1.91
ITGB5-213ENST00000608945 ALG3Q92685 438 aa3.11□□□□□ -1.91
ITGB5-213ENST00000608945 SYT3Q9BQG1 590 aa3.11□□□□□ -1.91
ITGB5-213ENST00000608945 GORASP1Q9BQQ3 440 aa3.11□□□□□ -1.91
ITGB5-213ENST00000608945 NOC4LQ9BVI4 516 aaKnown RBP3.11□□□□□ -1.91
ITGB5-213ENST00000608945 JADE2Q9NQC1 790 aa3.11□□□□□ -1.91
ITGB5-213ENST00000608945 PAGE1O75459 146 aa3.1□□□□□ -1.91
ITGB5-213ENST00000608945 LIG3P49916 1009 aa3.1□□□□□ -1.91
ITGB5-213ENST00000608945 FSTL1Q12841 308 aa3.1□□□□□ -1.91
ITGB5-213ENST00000608945 MAP3K11Q16584 847 aa3.1□□□□□ -1.91
ITGB5-213ENST00000608945 MEI1Q5TIA1 1274 aa3.1□□□□□ -1.91
ITGB5-213ENST00000608945 CRELD2Q6UXH1 353 aaPredicted RBP3.1□□□□□ -1.91
ITGB5-213ENST00000608945 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.1□□□□□ -1.91
ITGB5-213ENST00000608945 ARHGEF18Q6ZSZ5 1173 aa3.1□□□□□ -1.91
ITGB5-213ENST00000608945 RELL1Q8IUW5 271 aa3.1□□□□□ -1.91
ITGB5-213ENST00000608945 C1orf210Q8IVY1 113 aa3.1□□□□□ -1.91
ITGB5-213ENST00000608945 RNF141Q8WVD5 230 aa3.1□□□□□ -1.91
ITGB5-213ENST00000608945 EDAQ92838 391 aa3.1□□□□□ -1.91
ITGB5-213ENST00000608945 CLIP3Q96DZ5 547 aa3.1□□□□□ -1.91
ITGB5-213ENST00000608945 JMJD8Q96S16 334 aa3.1□□□□□ -1.91
ITGB5-213ENST00000608945 MIR1-1HGQ9H1L0 117 aa3.1□□□□□ -1.91
ITGB5-213ENST00000608945 RNF19AQ9NV58 838 aa3.1□□□□□ -1.91
ITGB5-213ENST00000608945 ERVK13-1Q9NX77 482 aa3.1□□□□□ -1.91
ITGB5-213ENST00000608945 A0A1W2PQ45 241 aaPredicted RBP3.09□□□□□ -1.91
ITGB5-213ENST00000608945 A0A1W2PQY0 241 aa3.09□□□□□ -1.91
ITGB5-213ENST00000608945 C9orf118A6NHY6 69 aa3.09□□□□□ -1.91
ITGB5-213ENST00000608945 BPNT1O95861 308 aa3.09□□□□□ -1.91
ITGB5-213ENST00000608945 LMNAP02545 664 aaKnown RBP3.09□□□□□ -1.91
ITGB5-213ENST00000608945 ZNF16P17020 682 aaPredicted RBP3.09□□□□□ -1.91
ITGB5-213ENST00000608945 TAGLNQ01995 201 aaKnown RBP3.09□□□□□ -1.91
ITGB5-213ENST00000608945 CLEC16AQ2KHT3 1053 aa3.09□□□□□ -1.91
ITGB5-213ENST00000608945 AGMOQ6ZNB7 445 aa3.09□□□□□ -1.91
ITGB5-213ENST00000608945 HDXQ7Z353 690 aa3.09□□□□□ -1.91
ITGB5-213ENST00000608945 RPUSD2Q8IZ73 545 aaKnown RBP3.09□□□□□ -1.91
ITGB5-213ENST00000608945 Q8N9P0 234 aaPredicted RBP3.09□□□□□ -1.91
ITGB5-213ENST00000608945 TCTN2Q96GX1 697 aa3.09□□□□□ -1.91
ITGB5-213ENST00000608945 USP31Q70CQ4 1352 aa3.09□□□□□ -1.92
ITGB5-213ENST00000608945 DDX3XO00571 662 aaKnown RBP eCLIP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms