RNA–Protein interactions for RNA: ENST00000608223.6

LINC00854-213, Long intergenic non-protein coding RNA 854, humanhuman

APPRIS ALT2 TSL 5

Gene LINC00854, Length 391 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00854-213ENST00000608223 CDX2Q99626 313 aaPredicted RBP16.66■□□□□ 0.26
LINC00854-213ENST00000608223 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.66■□□□□ 0.26
LINC00854-213ENST00000608223 UBA5Q9GZZ9 404 aa16.66■□□□□ 0.26
LINC00854-213ENST00000608223 TTYH1Q9H313 450 aaPredicted RBP16.66■□□□□ 0.26
LINC00854-213ENST00000608223 Q9Y3F1 56 aa16.66■□□□□ 0.26
LINC00854-213ENST00000608223 EYSQ5T1H1 3165 aa16.65■□□□□ 0.26
LINC00854-213ENST00000608223 CDH23Q9H251 3354 aa16.65■□□□□ 0.26
LINC00854-213ENST00000608223 B4E1Z4 1266 aa16.65■□□□□ 0.26
LINC00854-213ENST00000608223 HIP1O00291 1037 aa16.65■□□□□ 0.26
LINC00854-213ENST00000608223 CD4P01730 458 aa16.65■□□□□ 0.26
LINC00854-213ENST00000608223 CSF2RAP15509 400 aa16.65■□□□□ 0.26
LINC00854-213ENST00000608223 PSMC6P62333 389 aa16.65■□□□□ 0.26
LINC00854-213ENST00000608223 PPIGQ13427 754 aaKnown RBP eCLIP16.65■□□□□ 0.26
LINC00854-213ENST00000608223 USH1GQ495M9 461 aa16.65■□□□□ 0.26
LINC00854-213ENST00000608223 IQCA1Q86XH1 822 aa16.65■□□□□ 0.26
LINC00854-213ENST00000608223 DGKHQ86XP1 1220 aa16.65■□□□□ 0.26
LINC00854-213ENST00000608223 TMEM199Q8N511 208 aa16.65■□□□□ 0.26
LINC00854-213ENST00000608223 PNMA1Q8ND90 353 aa16.65■□□□□ 0.26
LINC00854-213ENST00000608223 WDR11Q9BZH6 1224 aa16.65■□□□□ 0.26
LINC00854-213ENST00000608223 PNMA2Q9UL42 364 aa16.65■□□□□ 0.26
LINC00854-213ENST00000608223 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.64■□□□□ 0.25
LINC00854-213ENST00000608223 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.64■□□□□ 0.25
LINC00854-213ENST00000608223 ACRP10323 421 aa16.64■□□□□ 0.25
LINC00854-213ENST00000608223 CYP2C18P33260 490 aa16.64■□□□□ 0.25
LINC00854-213ENST00000608223 RPS6P62753 249 aaKnown RBP16.64■□□□□ 0.25
LINC00854-213ENST00000608223 DUSP28Q4G0W2 176 aa16.64■□□□□ 0.25
LINC00854-213ENST00000608223 CCDC178Q5BJE1 867 aa16.64■□□□□ 0.25
LINC00854-213ENST00000608223 GPATCH4Q5T3I0 446 aaKnown RBP16.64■□□□□ 0.25
LINC00854-213ENST00000608223 C16orf59Q7L2K0 433 aa16.64■□□□□ 0.25
LINC00854-213ENST00000608223 SLC43A3Q8NBI5 491 aa16.64■□□□□ 0.25
LINC00854-213ENST00000608223 DSCC1Q9BVC3 393 aa16.64■□□□□ 0.25
LINC00854-213ENST00000608223 KAT14Q9H8E8 782 aa16.64■□□□□ 0.25
LINC00854-213ENST00000608223 ZSWIM5Q9P217 1185 aa16.64■□□□□ 0.25
LINC00854-213ENST00000608223 GRIN2DO15399 1336 aa16.64■□□□□ 0.25
LINC00854-213ENST00000608223 WDR19Q8NEZ3 1342 aa16.64■□□□□ 0.25
LINC00854-213ENST00000608223 LOC102724159A0A0B4J2E5 919 aa16.63■□□□□ 0.25
LINC00854-213ENST00000608223 PDE4DQ08499 809 aa16.63■□□□□ 0.25
LINC00854-213ENST00000608223 PWP2Q15269 919 aaKnown RBP16.63■□□□□ 0.25
LINC00854-213ENST00000608223 IMMTQ16891 758 aaKnown RBP16.63■□□□□ 0.25
LINC00854-213ENST00000608223 TMEM240Q5SV17 173 aa16.63■□□□□ 0.25
LINC00854-213ENST00000608223 MYLIPQ8WY64 445 aa16.63■□□□□ 0.25
LINC00854-213ENST00000608223 ZSCAN10Q96SZ4 725 aaPredicted RBP16.63■□□□□ 0.25
LINC00854-213ENST00000608223 TRPV6Q9H1D0 765 aa16.63■□□□□ 0.25
LINC00854-213ENST00000608223 PRUNE2Q8WUY3 3088 aa16.62■□□□□ 0.25
LINC00854-213ENST00000608223 CDC37Q16543 378 aaPredicted RBP16.62■□□□□ 0.25
LINC00854-213ENST00000608223 ZNF365Q70YC5 407 aa16.62■□□□□ 0.25
LINC00854-213ENST00000608223 MPHOSPH6Q99547 160 aaKnown RBP16.62■□□□□ 0.25
LINC00854-213ENST00000608223 HIPK3Q9H422 1215 aa16.62■□□□□ 0.25
LINC00854-213ENST00000608223 CTNNA3Q9UI47 895 aa16.62■□□□□ 0.25
LINC00854-213ENST00000608223 SUPT16HQ9Y5B9 1047 aaKnown RBP16.62■□□□□ 0.25
LINC00854-213ENST00000608223 GBF1Q92538 1859 aa16.62■□□□□ 0.25
LINC00854-213ENST00000608223 UMODL1Q5DID0 1318 aa16.62■□□□□ 0.25
LINC00854-213ENST00000608223 BAZ2BQ9UIF8 2168 aaKnown RBP16.61■□□□□ 0.25
LINC00854-213ENST00000608223 KIAA1217Q5T5P2 1943 aa16.61■□□□□ 0.25
LINC00854-213ENST00000608223 RBM47A0AV96 593 aaKnown RBP16.61■□□□□ 0.25
LINC00854-213ENST00000608223 B4GALT4O60513 344 aa16.61■□□□□ 0.25
LINC00854-213ENST00000608223 MYL3P08590 195 aa16.61■□□□□ 0.25
LINC00854-213ENST00000608223 DNAJB2P25686 324 aa16.61■□□□□ 0.25
LINC00854-213ENST00000608223 NT5C2P49902 561 aa16.61■□□□□ 0.25
LINC00854-213ENST00000608223 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.61■□□□□ 0.25
LINC00854-213ENST00000608223 ADGRF4Q8IZF3 695 aa16.61■□□□□ 0.25
LINC00854-213ENST00000608223 ENAHQ8N8S7 591 aaPredicted RBP16.61■□□□□ 0.25
LINC00854-213ENST00000608223 DNERQ8NFT8 737 aa16.61■□□□□ 0.25
LINC00854-213ENST00000608223 OR6J1Q8NGC5 347 aa16.61■□□□□ 0.25
LINC00854-213ENST00000608223 TBC1D5Q92609 795 aa16.61■□□□□ 0.25
LINC00854-213ENST00000608223 ANKS1AQ92625 1134 aa16.61■□□□□ 0.25
LINC00854-213ENST00000608223 SEZ6LQ9BYH1 1024 aa16.61■□□□□ 0.25
LINC00854-213ENST00000608223 KRT23Q9C075 422 aa16.61■□□□□ 0.25
LINC00854-213ENST00000608223 IL25Q9H293 177 aa16.61■□□□□ 0.25
LINC00854-213ENST00000608223 VAT1LQ9HCJ6 419 aa16.61■□□□□ 0.25
LINC00854-213ENST00000608223 POLR3EQ9NVU0 708 aa16.61■□□□□ 0.25
LINC00854-213ENST00000608223 TNKSO95271 1327 aa16.61■□□□□ 0.25
LINC00854-213ENST00000608223 MYH7BA7E2Y1 1941 aa16.6■□□□□ 0.25
LINC00854-213ENST00000608223 GRXCR1A8MXD5 290 aa16.6■□□□□ 0.25
LINC00854-213ENST00000608223 DHX16O60231 1041 aaKnown RBP16.6■□□□□ 0.25
LINC00854-213ENST00000608223 PARP1P09874 1014 aaKnown RBP16.6■□□□□ 0.25
LINC00854-213ENST00000608223 EDNRBP24530 442 aa16.6■□□□□ 0.25
LINC00854-213ENST00000608223 PDE4AP27815 886 aa16.6■□□□□ 0.25
LINC00854-213ENST00000608223 CPT1AP50416 773 aa16.6■□□□□ 0.25
LINC00854-213ENST00000608223 CCL23P55773 120 aa16.6■□□□□ 0.25
LINC00854-213ENST00000608223 PPP2R5BQ15173 497 aa16.6■□□□□ 0.25
LINC00854-213ENST00000608223 ASPRV1Q53RT3 343 aa16.6■□□□□ 0.25
LINC00854-213ENST00000608223 PSRC1Q6PGN9 363 aaPredicted RBP16.6■□□□□ 0.25
LINC00854-213ENST00000608223 MAFAQ8NHW3 353 aaPredicted RBP16.6■□□□□ 0.25
LINC00854-213ENST00000608223 COPS5Q92905 334 aa16.6■□□□□ 0.25
LINC00854-213ENST00000608223 UBAC1Q9BSL1 405 aa16.6■□□□□ 0.25
LINC00854-213ENST00000608223 IL23AQ9NPF7 189 aa16.6■□□□□ 0.25
LINC00854-213ENST00000608223 GPHNQ9NQX3 736 aaPredicted RBP16.6■□□□□ 0.25
LINC00854-213ENST00000608223 TRIP12Q14669 1992 aaPredicted RBP16.6■□□□□ 0.25
LINC00854-213ENST00000608223 SCN10AQ9Y5Y9 1956 aa16.6■□□□□ 0.25
LINC00854-213ENST00000608223 SCN5AQ14524 2016 aa16.6■□□□□ 0.25
LINC00854-213ENST00000608223 TMEM265A0A087WTH1 108 aa16.59■□□□□ 0.25
LINC00854-213ENST00000608223 B4DLN1 442 aa16.59■□□□□ 0.25
LINC00854-213ENST00000608223 FOSL2P15408 326 aa16.59■□□□□ 0.25
LINC00854-213ENST00000608223 MRPL12P52815 198 aaKnown RBP16.59■□□□□ 0.25
LINC00854-213ENST00000608223 PURAQ00577 322 aaKnown RBP16.59■□□□□ 0.25
LINC00854-213ENST00000608223 RGS22Q8NE09 1264 aa16.59■□□□□ 0.25
LINC00854-213ENST00000608223 SCFD2Q8WU76 684 aa16.59■□□□□ 0.25
LINC00854-213ENST00000608223 NOC4LQ9BVI4 516 aaKnown RBP16.59■□□□□ 0.25
LINC00854-213ENST00000608223 ALDH8A1Q9H2A2 487 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms