RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 ZIC5Q96T25 663 aa12.74□□□□□ -0.37
CTCFL-214ENST00000608108 TMEM260Q9NX78 707 aa12.74□□□□□ -0.37
CTCFL-214ENST00000608108 RBPJLQ9UBG7 517 aa12.74□□□□□ -0.37
CTCFL-214ENST00000608108 RABGAP1Q9Y3P9 1069 aa12.74□□□□□ -0.37
CTCFL-214ENST00000608108 RIPK3Q9Y572 518 aa12.74□□□□□ -0.37
CTCFL-214ENST00000608108 PIK3CDO00329 1044 aa12.73□□□□□ -0.37
CTCFL-214ENST00000608108 MEIS2O14770 477 aa12.73□□□□□ -0.37
CTCFL-214ENST00000608108 NCLP19338 710 aaKnown RBP12.73□□□□□ -0.37
CTCFL-214ENST00000608108 HOXA13P31271 388 aaPredicted RBP12.73□□□□□ -0.37
CTCFL-214ENST00000608108 DNM1Q05193 864 aaKnown RBP12.73□□□□□ -0.37
CTCFL-214ENST00000608108 TKFCQ3LXA3 575 aa12.73□□□□□ -0.37
CTCFL-214ENST00000608108 KRT25Q7Z3Z0 450 aa12.73□□□□□ -0.37
CTCFL-214ENST00000608108 MCF2L2Q86YR7 1114 aa12.73□□□□□ -0.37
CTCFL-214ENST00000608108 RIOX2Q8IUF8 465 aa12.73□□□□□ -0.37
CTCFL-214ENST00000608108 TEX2Q8IWB9 1127 aa12.73□□□□□ -0.37
CTCFL-214ENST00000608108 GBP4Q96PP9 640 aa12.73□□□□□ -0.37
CTCFL-214ENST00000608108 ACAD9Q9H845 621 aa12.73□□□□□ -0.37
CTCFL-214ENST00000608108 SSUH2Q9Y2M2 353 aa12.73□□□□□ -0.37
CTCFL-214ENST00000608108 GCOM1H8Y6P7 765 aaPredicted RBP12.73□□□□□ -0.37
CTCFL-214ENST00000608108 BAG4O95429 457 aaKnown RBP12.73□□□□□ -0.37
CTCFL-214ENST00000608108 POLR2MP0CAP2 368 aa12.73□□□□□ -0.37
CTCFL-214ENST00000608108 GCLCP48506 637 aaPredicted RBP12.73□□□□□ -0.37
CTCFL-214ENST00000608108 ERVK-9P63128 1117 aa12.73□□□□□ -0.37
CTCFL-214ENST00000608108 ERVK-24P63145 666 aa12.73□□□□□ -0.37
CTCFL-214ENST00000608108 AP3B2Q13367 1082 aa12.73□□□□□ -0.37
CTCFL-214ENST00000608108 NONOQ15233 471 aaKnown RBP eCLIP12.73□□□□□ -0.37
CTCFL-214ENST00000608108 TAF1CQ15572 869 aaPredicted RBP12.73□□□□□ -0.37
CTCFL-214ENST00000608108 RILPL1Q5EBL4 403 aa12.73□□□□□ -0.37
CTCFL-214ENST00000608108 ANKRD13CQ8N6S4 541 aa12.73□□□□□ -0.37
CTCFL-214ENST00000608108 PGBD1Q96JS3 809 aa12.73□□□□□ -0.37
CTCFL-214ENST00000608108 ZNF396Q96N95 335 aaPredicted RBP12.73□□□□□ -0.37
CTCFL-214ENST00000608108 SPDYE3A6NKU9 549 aa12.72□□□□□ -0.37
CTCFL-214ENST00000608108 AOC2O75106 756 aa12.72□□□□□ -0.37
CTCFL-214ENST00000608108 COPB2P35606 906 aa12.72□□□□□ -0.37
CTCFL-214ENST00000608108 TM4SF4P48230 202 aa12.72□□□□□ -0.37
CTCFL-214ENST00000608108 KRT85P78386 507 aa12.72□□□□□ -0.37
CTCFL-214ENST00000608108 HTRA3P83110 453 aa12.72□□□□□ -0.37
CTCFL-214ENST00000608108 GHRHRQ02643 423 aa12.72□□□□□ -0.37
CTCFL-214ENST00000608108 INF2Q27J81 1249 aa12.72□□□□□ -0.37
CTCFL-214ENST00000608108 NSMFQ6X4W1 530 aa12.72□□□□□ -0.37
CTCFL-214ENST00000608108 CLEC17AQ6ZS10 378 aa12.72□□□□□ -0.37
CTCFL-214ENST00000608108 NCAPG2Q86XI2 1143 aa12.72□□□□□ -0.37
CTCFL-214ENST00000608108 CHST13Q8NET6 341 aa12.72□□□□□ -0.37
CTCFL-214ENST00000608108 GPRC5AQ8NFJ5 357 aa12.72□□□□□ -0.37
CTCFL-214ENST00000608108 TBC1D5Q92609 795 aa12.72□□□□□ -0.37
CTCFL-214ENST00000608108 MOV10L1Q9BXT6 1211 aaKnown RBP12.72□□□□□ -0.37
CTCFL-214ENST00000608108 NOL7Q9UMY1 257 aaKnown RBP12.72□□□□□ -0.37
CTCFL-214ENST00000608108 LCTP09848 1927 aa12.72□□□□□ -0.37
CTCFL-214ENST00000608108 PLXNB2O15031 1838 aa12.71□□□□□ -0.37
CTCFL-214ENST00000608108 ZNFX1Q9P2E3 1918 aaKnown RBP12.71□□□□□ -0.37
CTCFL-214ENST00000608108 FIBPO43427 364 aa12.71□□□□□ -0.37
CTCFL-214ENST00000608108 SLC25A27O95847 323 aa12.71□□□□□ -0.37
CTCFL-214ENST00000608108 FOSP01100 380 aaPredicted RBP12.71□□□□□ -0.37
CTCFL-214ENST00000608108 ERCC3P19447 782 aa12.71□□□□□ -0.37
CTCFL-214ENST00000608108 ATP2B1P20020 1258 aa12.71□□□□□ -0.37
CTCFL-214ENST00000608108 HSD17B4P51659 736 aa12.71□□□□□ -0.37
CTCFL-214ENST00000608108 Q3C1V9 767 aa12.71□□□□□ -0.37
CTCFL-214ENST00000608108 MCTP2Q6DN12 878 aa12.71□□□□□ -0.37
CTCFL-214ENST00000608108 SLC30A10Q6XR72 485 aa12.71□□□□□ -0.37
CTCFL-214ENST00000608108 RNF207Q6ZRF8 634 aa12.71□□□□□ -0.37
CTCFL-214ENST00000608108 FCHSD1Q86WN1 690 aa12.71□□□□□ -0.37
CTCFL-214ENST00000608108 TBCKQ8TEA7 893 aa12.71□□□□□ -0.37
CTCFL-214ENST00000608108 USP28Q96RU2 1077 aa12.71□□□□□ -0.37
CTCFL-214ENST00000608108 ANO3Q9BYT9 981 aa12.71□□□□□ -0.37
CTCFL-214ENST00000608108 FTOQ9C0B1 505 aaKnown RBP eCLIP12.71□□□□□ -0.37
CTCFL-214ENST00000608108 FBXO40Q9UH90 709 aa12.71□□□□□ -0.37
CTCFL-214ENST00000608108 CFAP45Q9UL16 551 aa12.71□□□□□ -0.37
CTCFL-214ENST00000608108 CNPY2Q9Y2B0 182 aa12.71□□□□□ -0.37
CTCFL-214ENST00000608108 ADGRA2Q96PE1 1338 aa12.71□□□□□ -0.38
CTCFL-214ENST00000608108 TRAPPC10P48553 1259 aa12.7□□□□□ -0.38
CTCFL-214ENST00000608108 TOB1P50616 345 aaPredicted RBP12.7□□□□□ -0.38
CTCFL-214ENST00000608108 RPS6P62753 249 aaKnown RBP12.7□□□□□ -0.38
CTCFL-214ENST00000608108 CCNA1P78396 465 aa12.7□□□□□ -0.38
CTCFL-214ENST00000608108 CEBPZQ03701 1054 aaKnown RBP12.7□□□□□ -0.38
CTCFL-214ENST00000608108 NBR1Q14596 966 aa12.7□□□□□ -0.38
CTCFL-214ENST00000608108 FAM110CQ1W6H9 321 aa12.7□□□□□ -0.38
CTCFL-214ENST00000608108 ATL3Q6DD88 541 aa12.7□□□□□ -0.38
CTCFL-214ENST00000608108 SAMD3Q8N6K7 520 aa12.7□□□□□ -0.38
CTCFL-214ENST00000608108 A1CFQ9NQ94 594 aaKnown RBP12.7□□□□□ -0.38
CTCFL-214ENST00000608108 POLR3EQ9NVU0 708 aa12.7□□□□□ -0.38
CTCFL-214ENST00000608108 MAP3K20Q9NYL2 800 aaKnown RBP12.7□□□□□ -0.38
CTCFL-214ENST00000608108 TFIP11Q9UBB9 837 aaKnown RBP12.7□□□□□ -0.38
CTCFL-214ENST00000608108 MORF4L1Q9UBU8 362 aa12.7□□□□□ -0.38
CTCFL-214ENST00000608108 THSD7BQ9C0I4 1608 aa12.7□□□□□ -0.38
CTCFL-214ENST00000608108 ALDH1A1P00352 501 aa12.7□□□□□ -0.38
CTCFL-214ENST00000608108 VEGFBP49765 207 aa12.7□□□□□ -0.38
CTCFL-214ENST00000608108 TTC38Q5R3I4 469 aa12.7□□□□□ -0.38
CTCFL-214ENST00000608108 WDR78Q5VTH9 848 aa12.7□□□□□ -0.38
CTCFL-214ENST00000608108 ANO1Q5XXA6 986 aa12.7□□□□□ -0.38
CTCFL-214ENST00000608108 NEK8Q86SG6 692 aa12.7□□□□□ -0.38
CTCFL-214ENST00000608108 SHCBP1Q8NEM2 672 aa12.7□□□□□ -0.38
CTCFL-214ENST00000608108 SYTL5Q8TDW5 730 aaPredicted RBP12.7□□□□□ -0.38
CTCFL-214ENST00000608108 MAF1Q9H063 256 aa12.7□□□□□ -0.38
CTCFL-214ENST00000608108 GDPD2Q9HCC8 539 aa12.7□□□□□ -0.38
CTCFL-214ENST00000608108 ZFYVE28Q9HCC9 887 aa12.7□□□□□ -0.38
CTCFL-214ENST00000608108 CYP39A1Q9NYL5 469 aa12.7□□□□□ -0.38
CTCFL-214ENST00000608108 CPA4Q9UI42 421 aa12.7□□□□□ -0.38
CTCFL-214ENST00000608108 PCDHB6Q9Y5E3 794 aa12.7□□□□□ -0.38
CTCFL-214ENST00000608108 CEP350Q5VT06 3117 aa12.69□□□□□ -0.38
CTCFL-214ENST00000608108 WNT7AO00755 349 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms