RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 JMJD4Q9H9V9 463 aa22.35■■□□□ 1.17
CTSA-217ENST00000607482 PDGFCQ9NRA1 345 aa22.35■■□□□ 1.17
CTSA-217ENST00000607482 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.34■■□□□ 1.17
CTSA-217ENST00000607482 MYADML2A6NDP7 307 aa22.34■■□□□ 1.17
CTSA-217ENST00000607482 CLTBP09497 229 aa22.34■■□□□ 1.17
CTSA-217ENST00000607482 CST5P28325 142 aaPredicted RBP22.34■■□□□ 1.17
CTSA-217ENST00000607482 SNX17Q15036 470 aa22.34■■□□□ 1.17
CTSA-217ENST00000607482 FSCN1Q16658 493 aaKnown RBP22.34■■□□□ 1.17
CTSA-217ENST00000607482 HOMER1Q86YM7 354 aa22.34■■□□□ 1.17
CTSA-217ENST00000607482 STAG2Q8N3U4 1231 aa22.34■■□□□ 1.17
CTSA-217ENST00000607482 RGS22Q8NE09 1264 aa22.34■■□□□ 1.17
CTSA-217ENST00000607482 KATNBL1Q9H079 304 aa22.34■■□□□ 1.17
CTSA-217ENST00000607482 UPF3AQ9H1J1 476 aaKnown RBP22.34■■□□□ 1.17
CTSA-217ENST00000607482 TMEM39AQ9NV64 488 aa22.34■■□□□ 1.17
CTSA-217ENST00000607482 MCM3APO60318 1980 aa22.34■■□□□ 1.17
CTSA-217ENST00000607482 MROH7Q68CQ1 1323 aa22.33■■□□□ 1.17
CTSA-217ENST00000607482 ADCY6O43306 1168 aa22.33■■□□□ 1.17
CTSA-217ENST00000607482 SMPD1P17405 629 aa22.33■■□□□ 1.17
CTSA-217ENST00000607482 MCM5P33992 734 aa22.33■■□□□ 1.17
CTSA-217ENST00000607482 BEX3Q00994 111 aa22.33■■□□□ 1.17
CTSA-217ENST00000607482 BRDTQ58F21 947 aaPredicted RBP22.33■■□□□ 1.17
CTSA-217ENST00000607482 SKAP1Q86WV1 359 aa22.33■■□□□ 1.17
CTSA-217ENST00000607482 WDR11Q9BZH6 1224 aa22.33■■□□□ 1.17
CTSA-217ENST00000607482 RANBP2P49792 3224 aaKnown RBP22.33■■□□□ 1.17
CTSA-217ENST00000607482 ASTN1O14525 1302 aa22.32■■□□□ 1.16
CTSA-217ENST00000607482 ELP1O95163 1332 aa22.32■■□□□ 1.16
CTSA-217ENST00000607482 RAG1P15918 1043 aa22.32■■□□□ 1.16
CTSA-217ENST00000607482 CTCFLQ8NI51 663 aaPredicted RBP22.32■■□□□ 1.16
CTSA-217ENST00000607482 MAF1Q9H063 256 aa22.32■■□□□ 1.16
CTSA-217ENST00000607482 LSG1Q9H089 658 aaKnown RBP22.32■■□□□ 1.16
CTSA-217ENST00000607482 PCDH10Q9P2E7 1040 aa22.32■■□□□ 1.16
CTSA-217ENST00000607482 MAD2L2Q9UI95 211 aa22.32■■□□□ 1.16
CTSA-217ENST00000607482 PCDHA1Q9Y5I3 950 aa22.32■■□□□ 1.16
CTSA-217ENST00000607482 TAF6LQ9Y6J9 622 aa22.32■■□□□ 1.16
CTSA-217ENST00000607482 A0A0U1RQG5 324 aaPredicted RBP22.31■■□□□ 1.16
CTSA-217ENST00000607482 CCDC69A6NI79 296 aa22.31■■□□□ 1.16
CTSA-217ENST00000607482 ZBTB5O15062 677 aa22.31■■□□□ 1.16
CTSA-217ENST00000607482 PRC1O43663 620 aa22.31■■□□□ 1.16
CTSA-217ENST00000607482 CDC45O75419 566 aa22.31■■□□□ 1.16
CTSA-217ENST00000607482 CABYRO75952 493 aa22.31■■□□□ 1.16
CTSA-217ENST00000607482 CFBP00751 764 aa22.31■■□□□ 1.16
CTSA-217ENST00000607482 KIF5BP33176 963 aa22.31■■□□□ 1.16
CTSA-217ENST00000607482 GRM4Q14833 912 aa22.31■■□□□ 1.16
CTSA-217ENST00000607482 PPP2R5BQ15173 497 aa22.31■■□□□ 1.16
CTSA-217ENST00000607482 ARHGEF16Q5VV41 709 aa22.31■■□□□ 1.16
CTSA-217ENST00000607482 TAPT1Q6NXT6 567 aa22.31■■□□□ 1.16
CTSA-217ENST00000607482 STOX1Q6ZVD7 989 aa22.31■■□□□ 1.16
CTSA-217ENST00000607482 TMTC2Q8N394 836 aa22.31■■□□□ 1.16
CTSA-217ENST00000607482 MORC4Q8TE76 937 aa22.31■■□□□ 1.16
CTSA-217ENST00000607482 NSUN6Q8TEA1 469 aaKnown RBP22.31■■□□□ 1.16
CTSA-217ENST00000607482 GPHNQ9NQX3 736 aaPredicted RBP22.31■■□□□ 1.16
CTSA-217ENST00000607482 PDLIM7Q9NR12 457 aa22.31■■□□□ 1.16
CTSA-217ENST00000607482 GNEQ9Y223 722 aaKnown RBP22.31■■□□□ 1.16
CTSA-217ENST00000607482 Q9Y3F1 56 aa22.31■■□□□ 1.16
CTSA-217ENST00000607482 PALM3A6NDB9 673 aaPredicted RBP22.3■■□□□ 1.16
CTSA-217ENST00000607482 SLC27A2O14975 620 aa22.3■■□□□ 1.16
CTSA-217ENST00000607482 TLR3O15455 904 aaKnown RBP22.3■■□□□ 1.16
CTSA-217ENST00000607482 IRX5P78411 483 aaPredicted RBP22.3■■□□□ 1.16
CTSA-217ENST00000607482 CREB3L3Q68CJ9 461 aa22.3■■□□□ 1.16
CTSA-217ENST00000607482 CCSAPQ6IQ19 270 aaPredicted RBP22.3■■□□□ 1.16
CTSA-217ENST00000607482 CXCL17Q6UXB2 119 aa22.3■■□□□ 1.16
CTSA-217ENST00000607482 SCFD2Q8WU76 684 aa22.3■■□□□ 1.16
CTSA-217ENST00000607482 BADQ92934 168 aa22.3■■□□□ 1.16
CTSA-217ENST00000607482 RMDN3Q96TC7 470 aa22.3■■□□□ 1.16
CTSA-217ENST00000607482 CPT1AP50416 773 aa22.29■■□□□ 1.16
CTSA-217ENST00000607482 DUSP28Q4G0W2 176 aa22.29■■□□□ 1.16
CTSA-217ENST00000607482 MB21D2Q8IYB1 491 aaPredicted RBP22.29■■□□□ 1.16
CTSA-217ENST00000607482 OR6J1Q8NGC5 347 aa22.29■■□□□ 1.16
CTSA-217ENST00000607482 PIBF1Q8WXW3 757 aa22.29■■□□□ 1.16
CTSA-217ENST00000607482 TOX2Q96NM4 488 aa22.29■■□□□ 1.16
CTSA-217ENST00000607482 ARVCFO00192 962 aa22.28■■□□□ 1.16
CTSA-217ENST00000607482 TTLL4Q14679 1199 aa22.28■■□□□ 1.16
CTSA-217ENST00000607482 SYNE3Q6ZMZ3 975 aa22.28■■□□□ 1.16
CTSA-217ENST00000607482 ANKRD33Q7Z3H0 272 aa22.28■■□□□ 1.16
CTSA-217ENST00000607482 SH3RF1Q7Z6J0 888 aa22.28■■□□□ 1.16
CTSA-217ENST00000607482 SYTL5Q8TDW5 730 aaPredicted RBP22.28■■□□□ 1.16
CTSA-217ENST00000607482 IGDCC4Q8TDY8 1250 aa22.28■■□□□ 1.16
CTSA-217ENST00000607482 TMEM87BQ96K49 555 aa22.28■■□□□ 1.16
CTSA-217ENST00000607482 PIGSQ96S52 555 aa22.28■■□□□ 1.16
CTSA-217ENST00000607482 SENP2Q9HC62 589 aa22.28■■□□□ 1.16
CTSA-217ENST00000607482 TRIM43BA6NCK2 446 aa22.27■■□□□ 1.16
CTSA-217ENST00000607482 NKRFO15226 690 aaKnown RBP eCLIP22.27■■□□□ 1.16
CTSA-217ENST00000607482 TXNP10599 105 aaKnown RBP22.27■■□□□ 1.16
CTSA-217ENST00000607482 STXBP2Q15833 593 aa22.27■■□□□ 1.16
CTSA-217ENST00000607482 SEPT14Q6ZU15 432 aa22.27■■□□□ 1.16
CTSA-217ENST00000607482 ZNF654Q8IZM8 581 aa22.27■■□□□ 1.16
CTSA-217ENST00000607482 TBC1D5Q92609 795 aa22.27■■□□□ 1.16
CTSA-217ENST00000607482 TRIM43Q96BQ3 446 aaPredicted RBP22.27■■□□□ 1.16
CTSA-217ENST00000607482 TAAR1Q96RJ0 339 aa22.27■■□□□ 1.16
CTSA-217ENST00000607482 IWS1Q96ST2 819 aa22.27■■□□□ 1.16
CTSA-217ENST00000607482 SEC63Q9UGP8 760 aaKnown RBP22.27■■□□□ 1.16
CTSA-217ENST00000607482 PNMA6FA0A0J9YX94 578 aa22.26■■□□□ 1.15
CTSA-217ENST00000607482 DDAH1O94760 285 aa22.26■■□□□ 1.15
CTSA-217ENST00000607482 MYL3P08590 195 aa22.26■■□□□ 1.15
CTSA-217ENST00000607482 EIF2AK2P19525 551 aaKnown RBP22.26■■□□□ 1.15
CTSA-217ENST00000607482 GNAQP50148 359 aa22.26■■□□□ 1.15
CTSA-217ENST00000607482 ANTXR2P58335 489 aa22.26■■□□□ 1.15
CTSA-217ENST00000607482 TROAPQ12815 778 aa22.26■■□□□ 1.15
CTSA-217ENST00000607482 RRP36Q96EU6 259 aaKnown RBP22.26■■□□□ 1.15
CTSA-217ENST00000607482 MTA3Q9BTC8 594 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms