RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 LSG1Q9H089 658 aaKnown RBP16.75■□□□□ 0.27
PKNOX1-210ENST00000607049 UPF3AQ9H1J1 476 aaKnown RBP16.75■□□□□ 0.27
PKNOX1-210ENST00000607049 JMJD4Q9H9V9 463 aa16.75■□□□□ 0.27
PKNOX1-210ENST00000607049 PALM3A6NDB9 673 aaPredicted RBP16.74■□□□□ 0.27
PKNOX1-210ENST00000607049 CCDC69A6NI79 296 aa16.74■□□□□ 0.27
PKNOX1-210ENST00000607049 ZBTB5O15062 677 aa16.74■□□□□ 0.27
PKNOX1-210ENST00000607049 PRC1O43663 620 aa16.74■□□□□ 0.27
PKNOX1-210ENST00000607049 CABYRO75952 493 aa16.74■□□□□ 0.27
PKNOX1-210ENST00000607049 ASGR1P07306 291 aa16.74■□□□□ 0.27
PKNOX1-210ENST00000607049 FXR1P51114 621 aaKnown RBP eCLIP16.74■□□□□ 0.27
PKNOX1-210ENST00000607049 GRM4Q14833 912 aa16.74■□□□□ 0.27
PKNOX1-210ENST00000607049 CHST3Q7LGC8 479 aa16.74■□□□□ 0.27
PKNOX1-210ENST00000607049 NSUN6Q8TEA1 469 aaKnown RBP16.74■□□□□ 0.27
PKNOX1-210ENST00000607049 TMEM87BQ96K49 555 aa16.74■□□□□ 0.27
PKNOX1-210ENST00000607049 KATNBL1Q9H079 304 aa16.74■□□□□ 0.27
PKNOX1-210ENST00000607049 PRO3102Q9H379 93 aa16.74■□□□□ 0.27
PKNOX1-210ENST00000607049 MAD2L2Q9UI95 211 aa16.74■□□□□ 0.27
PKNOX1-210ENST00000607049 FRMPD3Q5JV73 1810 aa16.74■□□□□ 0.27
PKNOX1-210ENST00000607049 SLC27A2O14975 620 aa16.73■□□□□ 0.27
PKNOX1-210ENST00000607049 DYNC1LI2O43237 492 aaPredicted RBP16.73■□□□□ 0.27
PKNOX1-210ENST00000607049 PQBP1O60828 265 aaKnown RBP16.73■□□□□ 0.27
PKNOX1-210ENST00000607049 CALM1P0DP23 149 aa16.73■□□□□ 0.27
PKNOX1-210ENST00000607049 CALM2P0DP24 149 aa16.73■□□□□ 0.27
PKNOX1-210ENST00000607049 CALM3P0DP25 149 aa16.73■□□□□ 0.27
PKNOX1-210ENST00000607049 GNAQP50148 359 aa16.73■□□□□ 0.27
PKNOX1-210ENST00000607049 MDM2Q00987 491 aaPredicted RBP16.73■□□□□ 0.27
PKNOX1-210ENST00000607049 TLE2Q04725 743 aa16.73■□□□□ 0.27
PKNOX1-210ENST00000607049 FSCN1Q16658 493 aaKnown RBP16.73■□□□□ 0.27
PKNOX1-210ENST00000607049 CREB3L3Q68CJ9 461 aa16.73■□□□□ 0.27
PKNOX1-210ENST00000607049 STOX1Q6ZVD7 989 aa16.73■□□□□ 0.27
PKNOX1-210ENST00000607049 HOMER1Q86YM7 354 aa16.73■□□□□ 0.27
PKNOX1-210ENST00000607049 MB21D2Q8IYB1 491 aaPredicted RBP16.73■□□□□ 0.27
PKNOX1-210ENST00000607049 STAG2Q8N3U4 1231 aa16.73■□□□□ 0.27
PKNOX1-210ENST00000607049 SAMD3Q8N6K7 520 aa16.73■□□□□ 0.27
PKNOX1-210ENST00000607049 MAP3K14Q99558 947 aa16.73■□□□□ 0.27
PKNOX1-210ENST00000607049 SEZ6LQ9BYH1 1024 aa16.73■□□□□ 0.27
PKNOX1-210ENST00000607049 WDR11Q9BZH6 1224 aa16.73■□□□□ 0.27
PKNOX1-210ENST00000607049 MAP3K20Q9NYL2 800 aaKnown RBP16.73■□□□□ 0.27
PKNOX1-210ENST00000607049 PCDHA1Q9Y5I3 950 aa16.73■□□□□ 0.27
PKNOX1-210ENST00000607049 TRIOBPQ9H2D6 2365 aa16.72■□□□□ 0.27
PKNOX1-210ENST00000607049 A0A0U1RQG5 324 aaPredicted RBP16.72■□□□□ 0.27
PKNOX1-210ENST00000607049 NKRFO15226 690 aaKnown RBP eCLIP16.72■□□□□ 0.27
PKNOX1-210ENST00000607049 TLR3O15455 904 aaKnown RBP16.72■□□□□ 0.27
PKNOX1-210ENST00000607049 DDAH1O94760 285 aa16.72■□□□□ 0.27
PKNOX1-210ENST00000607049 CLTBP09497 229 aa16.72■□□□□ 0.27
PKNOX1-210ENST00000607049 DUSP28Q4G0W2 176 aa16.72■□□□□ 0.27
PKNOX1-210ENST00000607049 TAPT1Q6NXT6 567 aa16.72■□□□□ 0.27
PKNOX1-210ENST00000607049 SYNE3Q6ZMZ3 975 aa16.72■□□□□ 0.27
PKNOX1-210ENST00000607049 TDHQ8IZJ6 230 aa16.72■□□□□ 0.27
PKNOX1-210ENST00000607049 SCFD2Q8WU76 684 aa16.72■□□□□ 0.27
PKNOX1-210ENST00000607049 TOX2Q96NM4 488 aa16.72■□□□□ 0.27
PKNOX1-210ENST00000607049 PURBQ96QR8 312 aaKnown RBP16.72■□□□□ 0.27
PKNOX1-210ENST00000607049 IWS1Q96ST2 819 aa16.72■□□□□ 0.27
PKNOX1-210ENST00000607049 LZTS2Q9BRK4 669 aa16.72■□□□□ 0.27
PKNOX1-210ENST00000607049 GPHNQ9NQX3 736 aaPredicted RBP16.72■□□□□ 0.27
PKNOX1-210ENST00000607049 GNEQ9Y223 722 aaKnown RBP16.72■□□□□ 0.27
PKNOX1-210ENST00000607049 ASTN1O14525 1302 aa16.71■□□□□ 0.27
PKNOX1-210ENST00000607049 SMCHD1A6NHR9 2005 aa16.71■□□□□ 0.27
PKNOX1-210ENST00000607049 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.71■□□□□ 0.27
PKNOX1-210ENST00000607049 CFBP00751 764 aa16.71■□□□□ 0.27
PKNOX1-210ENST00000607049 SMPD1P17405 629 aa16.71■□□□□ 0.27
PKNOX1-210ENST00000607049 CPT1AP50416 773 aa16.71■□□□□ 0.27
PKNOX1-210ENST00000607049 NKX3-2P78367 333 aa16.71■□□□□ 0.27
PKNOX1-210ENST00000607049 TROAPQ12815 778 aa16.71■□□□□ 0.27
PKNOX1-210ENST00000607049 KRT32Q14532 448 aa16.71■□□□□ 0.27
PKNOX1-210ENST00000607049 PPP2R5BQ15173 497 aa16.71■□□□□ 0.27
PKNOX1-210ENST00000607049 NECTIN1Q15223 517 aa16.71■□□□□ 0.27
PKNOX1-210ENST00000607049 STXBP2Q15833 593 aa16.71■□□□□ 0.27
PKNOX1-210ENST00000607049 ARHGEF16Q5VV41 709 aa16.71■□□□□ 0.27
PKNOX1-210ENST00000607049 CCSAPQ6IQ19 270 aaPredicted RBP16.71■□□□□ 0.27
PKNOX1-210ENST00000607049 ZNF654Q8IZM8 581 aa16.71■□□□□ 0.27
PKNOX1-210ENST00000607049 IGDCC4Q8TDY8 1250 aa16.71■□□□□ 0.27
PKNOX1-210ENST00000607049 RMDN3Q96TC7 470 aa16.71■□□□□ 0.27
PKNOX1-210ENST00000607049 PDGFCQ9NRA1 345 aa16.71■□□□□ 0.27
PKNOX1-210ENST00000607049 TMEM39AQ9NV64 488 aa16.71■□□□□ 0.27
PKNOX1-210ENST00000607049 SEC63Q9UGP8 760 aaKnown RBP16.71■□□□□ 0.27
PKNOX1-210ENST00000607049 TAF6LQ9Y6J9 622 aa16.71■□□□□ 0.27
PKNOX1-210ENST00000607049 PNMA6FA0A0J9YX94 578 aa16.7■□□□□ 0.26
PKNOX1-210ENST00000607049 MYADML2A6NDP7 307 aa16.7■□□□□ 0.26
PKNOX1-210ENST00000607049 ADCY6O43306 1168 aa16.7■□□□□ 0.26
PKNOX1-210ENST00000607049 RAG1P15918 1043 aa16.7■□□□□ 0.26
PKNOX1-210ENST00000607049 LIFRP42702 1097 aa16.7■□□□□ 0.26
PKNOX1-210ENST00000607049 BEX3Q00994 111 aa16.7■□□□□ 0.26
PKNOX1-210ENST00000607049 TTLL4Q14679 1199 aa16.7■□□□□ 0.26
PKNOX1-210ENST00000607049 ANKRD33Q7Z3H0 272 aa16.7■□□□□ 0.26
PKNOX1-210ENST00000607049 SYTL5Q8TDW5 730 aaPredicted RBP16.7■□□□□ 0.26
PKNOX1-210ENST00000607049 RRP36Q96EU6 259 aaKnown RBP16.7■□□□□ 0.26
PKNOX1-210ENST00000607049 RIOX1Q9H6W3 641 aa16.7■□□□□ 0.26
PKNOX1-210ENST00000607049 PDLIM7Q9NR12 457 aa16.7■□□□□ 0.26
PKNOX1-210ENST00000607049 POLR3EQ9NVU0 708 aa16.7■□□□□ 0.26
PKNOX1-210ENST00000607049 SLC12A7Q9Y666 1083 aa16.7■□□□□ 0.26
PKNOX1-210ENST00000607049 ALPK3Q96L96 1907 aa16.69■□□□□ 0.26
PKNOX1-210ENST00000607049 RBM47A0AV96 593 aaKnown RBP16.69■□□□□ 0.26
PKNOX1-210ENST00000607049 ARVCFO00192 962 aa16.69■□□□□ 0.26
PKNOX1-210ENST00000607049 HMGB1P09429 215 aaKnown RBP16.69■□□□□ 0.26
PKNOX1-210ENST00000607049 EDNRBP24530 442 aa16.69■□□□□ 0.26
PKNOX1-210ENST00000607049 SMARCA1P28370 1054 aa16.69■□□□□ 0.26
PKNOX1-210ENST00000607049 ANTXR2P58335 489 aa16.69■□□□□ 0.26
PKNOX1-210ENST00000607049 OR6J1Q8NGC5 347 aa16.69■□□□□ 0.26
PKNOX1-210ENST00000607049 MTMR8Q96EF0 704 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms