RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 KDM4AO75164 1064 aa8.94□□□□□ -0.98
CUX1-219ENST00000606749 GOLGA8HP0CJ92 632 aa8.94□□□□□ -0.98
CUX1-219ENST00000606749 CALML3P27482 149 aa8.94□□□□□ -0.98
CUX1-219ENST00000606749 NT5C2P49902 561 aa8.94□□□□□ -0.98
CUX1-219ENST00000606749 RPS6P62753 249 aaKnown RBP8.94□□□□□ -0.98
CUX1-219ENST00000606749 ITGA7Q13683 1181 aa8.94□□□□□ -0.98
CUX1-219ENST00000606749 PWP2Q15269 919 aaKnown RBP8.94□□□□□ -0.98
CUX1-219ENST00000606749 DUSP28Q4G0W2 176 aa8.94□□□□□ -0.98
CUX1-219ENST00000606749 CCDC178Q5BJE1 867 aa8.94□□□□□ -0.98
CUX1-219ENST00000606749 GPATCH4Q5T3I0 446 aaKnown RBP8.94□□□□□ -0.98
CUX1-219ENST00000606749 RNF207Q6ZRF8 634 aa8.94□□□□□ -0.98
CUX1-219ENST00000606749 C16orf59Q7L2K0 433 aa8.94□□□□□ -0.98
CUX1-219ENST00000606749 IQCA1Q86XH1 822 aa8.94□□□□□ -0.98
CUX1-219ENST00000606749 CDX2Q99626 313 aaPredicted RBP8.94□□□□□ -0.98
CUX1-219ENST00000606749 WDR11Q9BZH6 1224 aa8.94□□□□□ -0.98
CUX1-219ENST00000606749 CPVLQ9H3G5 476 aa8.94□□□□□ -0.98
CUX1-219ENST00000606749 CTNNA3Q9UI47 895 aa8.94□□□□□ -0.98
CUX1-219ENST00000606749 SUPT16HQ9Y5B9 1047 aaKnown RBP8.94□□□□□ -0.98
CUX1-219ENST00000606749 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.93□□□□□ -0.98
CUX1-219ENST00000606749 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.93□□□□□ -0.98
CUX1-219ENST00000606749 B4E1Z4 1266 aa8.93□□□□□ -0.98
CUX1-219ENST00000606749 TLR3O15455 904 aaKnown RBP8.93□□□□□ -0.98
CUX1-219ENST00000606749 CSF2RAP15509 400 aa8.93□□□□□ -0.98
CUX1-219ENST00000606749 PDE4AP27815 886 aa8.93□□□□□ -0.98
CUX1-219ENST00000606749 IMMTQ16891 758 aaKnown RBP8.93□□□□□ -0.98
CUX1-219ENST00000606749 TMEM240Q5SV17 173 aa8.93□□□□□ -0.98
CUX1-219ENST00000606749 SLC30A10Q6XR72 485 aa8.93□□□□□ -0.98
CUX1-219ENST00000606749 TMEM199Q8N511 208 aa8.93□□□□□ -0.98
CUX1-219ENST00000606749 ENAHQ8N8S7 591 aaPredicted RBP8.93□□□□□ -0.98
CUX1-219ENST00000606749 PNMA1Q8ND90 353 aa8.93□□□□□ -0.98
CUX1-219ENST00000606749 RGS22Q8NE09 1264 aa8.93□□□□□ -0.98
CUX1-219ENST00000606749 DNERQ8NFT8 737 aa8.93□□□□□ -0.98
CUX1-219ENST00000606749 ZSCAN10Q96SZ4 725 aaPredicted RBP8.93□□□□□ -0.98
CUX1-219ENST00000606749 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.93□□□□□ -0.987e-7■■□□□ 11.7
CUX1-219ENST00000606749 SEZ6LQ9BYH1 1024 aa8.93□□□□□ -0.98
CUX1-219ENST00000606749 TTYH1Q9H313 450 aaPredicted RBP8.93□□□□□ -0.98
CUX1-219ENST00000606749 KAT14Q9H8E8 782 aa8.93□□□□□ -0.98
CUX1-219ENST00000606749 WDR19Q8NEZ3 1342 aa8.93□□□□□ -0.98
CUX1-219ENST00000606749 B4GALT4O60513 344 aa8.92□□□□□ -0.98
CUX1-219ENST00000606749 ACRP10323 421 aa8.92□□□□□ -0.98
CUX1-219ENST00000606749 EDNRBP24530 442 aa8.92□□□□□ -0.98
CUX1-219ENST00000606749 CYP2C18P33260 490 aa8.92□□□□□ -0.98
CUX1-219ENST00000606749 PSMC6P62333 389 aa8.92□□□□□ -0.98
CUX1-219ENST00000606749 PDE4DQ08499 809 aa8.92□□□□□ -0.98
CUX1-219ENST00000606749 PPIGQ13427 754 aaKnown RBP eCLIP8.92□□□□□ -0.985e-7■■■□□ 16.3
CUX1-219ENST00000606749 USH1GQ495M9 461 aa8.92□□□□□ -0.98
CUX1-219ENST00000606749 ADGRF4Q8IZF3 695 aa8.92□□□□□ -0.98
CUX1-219ENST00000606749 TBC1D5Q92609 795 aa8.92□□□□□ -0.98
CUX1-219ENST00000606749 PPP1R12CQ9BZL4 782 aa8.92□□□□□ -0.98
CUX1-219ENST00000606749 KRT23Q9C075 422 aa8.92□□□□□ -0.98
CUX1-219ENST00000606749 MAF1Q9H063 256 aa8.92□□□□□ -0.98
CUX1-219ENST00000606749 TRPV6Q9H1D0 765 aa8.92□□□□□ -0.98
CUX1-219ENST00000606749 IL25Q9H293 177 aa8.92□□□□□ -0.98
CUX1-219ENST00000606749 TNKSO95271 1327 aa8.91□□□□□ -0.98
CUX1-219ENST00000606749 B4DLN1 442 aa8.91□□□□□ -0.98
CUX1-219ENST00000606749 NKRFO15226 690 aaKnown RBP eCLIP8.91□□□□□ -0.987e-6■■□□□ 12.8
CUX1-219ENST00000606749 PARP1P09874 1014 aaKnown RBP8.91□□□□□ -0.98
CUX1-219ENST00000606749 GSPT1P15170 499 aaKnown RBP8.91□□□□□ -0.98
CUX1-219ENST00000606749 MRPL12P52815 198 aaKnown RBP8.91□□□□□ -0.98
CUX1-219ENST00000606749 PURAQ00577 322 aaKnown RBP8.91□□□□□ -0.98
CUX1-219ENST00000606749 CDC37Q16543 378 aaPredicted RBP8.91□□□□□ -0.98
CUX1-219ENST00000606749 ASPRV1Q53RT3 343 aa8.91□□□□□ -0.98
CUX1-219ENST00000606749 TTC22Q5TAA0 569 aa8.91□□□□□ -0.98
CUX1-219ENST00000606749 RASIP1Q5U651 963 aa8.91□□□□□ -0.98
CUX1-219ENST00000606749 ZNF365Q70YC5 407 aa8.91□□□□□ -0.98
CUX1-219ENST00000606749 TAAR1Q96RJ0 339 aa8.91□□□□□ -0.98
CUX1-219ENST00000606749 MPHOSPH6Q99547 160 aaKnown RBP8.91□□□□□ -0.98
CUX1-219ENST00000606749 HIPK3Q9H422 1215 aa8.91□□□□□ -0.98
CUX1-219ENST00000606749 CNNM2Q9H8M5 875 aa8.91□□□□□ -0.98
CUX1-219ENST00000606749 VAT1LQ9HCJ6 419 aa8.91□□□□□ -0.98
CUX1-219ENST00000606749 POLR3EQ9NVU0 708 aa8.91□□□□□ -0.98
CUX1-219ENST00000606749 LCTP09848 1927 aa8.91□□□□□ -0.98
CUX1-219ENST00000606749 EYSQ5T1H1 3165 aa8.9□□□□□ -0.98
CUX1-219ENST00000606749 ABCB11O95342 1321 aa8.9□□□□□ -0.98
CUX1-219ENST00000606749 UMODL1Q5DID0 1318 aa8.9□□□□□ -0.98
CUX1-219ENST00000606749 TMEM265A0A087WTH1 108 aa8.9□□□□□ -0.98
CUX1-219ENST00000606749 FGBP02675 491 aa8.9□□□□□ -0.98
CUX1-219ENST00000606749 MYL3P08590 195 aa8.9□□□□□ -0.98
CUX1-219ENST00000606749 TXNP10599 105 aaKnown RBP8.9□□□□□ -0.98
CUX1-219ENST00000606749 DNAJB2P25686 324 aa8.9□□□□□ -0.98
CUX1-219ENST00000606749 CPT1AP50416 773 aa8.9□□□□□ -0.98
CUX1-219ENST00000606749 CCL23P55773 120 aa8.9□□□□□ -0.98
CUX1-219ENST00000606749 GRIN2CQ14957 1233 aa8.9□□□□□ -0.98
CUX1-219ENST00000606749 SEC23AQ15436 765 aa8.9□□□□□ -0.98
CUX1-219ENST00000606749 QRICH1Q2TAL8 776 aa8.9□□□□□ -0.98
CUX1-219ENST00000606749 IFIT1BQ5T764 474 aaKnown RBP8.9□□□□□ -0.98
CUX1-219ENST00000606749 CYB5R4Q7L1T6 521 aa8.9□□□□□ -0.98
CUX1-219ENST00000606749 FBXO11Q86XK2 927 aa8.9□□□□□ -0.98
CUX1-219ENST00000606749 MCF2L2Q86YR7 1114 aa8.9□□□□□ -0.98
CUX1-219ENST00000606749 STAG2Q8N3U4 1231 aa8.9□□□□□ -0.98
CUX1-219ENST00000606749 OR6J1Q8NGC5 347 aa8.9□□□□□ -0.98
CUX1-219ENST00000606749 SYTL5Q8TDW5 730 aaPredicted RBP8.9□□□□□ -0.98
CUX1-219ENST00000606749 SCFD2Q8WU76 684 aa8.9□□□□□ -0.98
CUX1-219ENST00000606749 MYLIPQ8WY64 445 aa8.9□□□□□ -0.98
CUX1-219ENST00000606749 HERVK_113Q902F9 699 aa8.9□□□□□ -0.98
CUX1-219ENST00000606749 COPS5Q92905 334 aa8.9□□□□□ -0.98
CUX1-219ENST00000606749 UBAC1Q9BSL1 405 aa8.9□□□□□ -0.98
CUX1-219ENST00000606749 MTG1Q9BT17 334 aaPredicted RBP8.9□□□□□ -0.98
CUX1-219ENST00000606749 NOC4LQ9BVI4 516 aaKnown RBP8.9□□□□□ -0.98
CUX1-219ENST00000606749 ALDH8A1Q9H2A2 487 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms