RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 PANX2Q96RD6 677 aa22.31■■□□□ 1.16
MMP28-201ENST00000605424 PSMD1Q99460 953 aa22.31■■□□□ 1.16
MMP28-201ENST00000605424 MMTAG2Q9BU76 263 aaKnown RBP22.31■■□□□ 1.16
MMP28-201ENST00000605424 TDRD3Q9H7E2 651 aaKnown RBP22.31■■□□□ 1.16
MMP28-201ENST00000605424 LRWD1Q9UFC0 647 aa22.31■■□□□ 1.16
MMP28-201ENST00000605424 PSMA7O14818 248 aa22.31■■□□□ 1.16
MMP28-201ENST00000605424 SYCP1Q15431 976 aa22.31■■□□□ 1.16
MMP28-201ENST00000605424 DHTKD1Q96HY7 919 aaPredicted RBP22.31■■□□□ 1.16
MMP28-201ENST00000605424 TRIM9Q9C026 710 aa22.31■■□□□ 1.16
MMP28-201ENST00000605424 VPS33BQ9H267 617 aa22.31■■□□□ 1.16
MMP28-201ENST00000605424 GDAQ9Y2T3 454 aa22.31■■□□□ 1.16
MMP28-201ENST00000605424 YDJCA8MPS7 323 aa22.3■■□□□ 1.16
MMP28-201ENST00000605424 AKR1B15C9JRZ8 316 aaPredicted RBP22.3■■□□□ 1.16
MMP28-201ENST00000605424 EDIL3O43854 480 aa22.3■■□□□ 1.16
MMP28-201ENST00000605424 SEPT2Q15019 361 aa22.3■■□□□ 1.16
MMP28-201ENST00000605424 COBLL1Q53SF7 1204 aa22.3■■□□□ 1.16
MMP28-201ENST00000605424 PPFIBP1Q86W92 1011 aa22.3■■□□□ 1.16
MMP28-201ENST00000605424 SIAH1Q8IUQ4 282 aa22.3■■□□□ 1.16
MMP28-201ENST00000605424 TTLL6Q8N841 843 aa22.3■■□□□ 1.16
MMP28-201ENST00000605424 NOC3LQ8WTT2 800 aaKnown RBP22.3■■□□□ 1.16
MMP28-201ENST00000605424 NAA15Q9BXJ9 866 aaKnown RBP22.3■■□□□ 1.16
MMP28-201ENST00000605424 TMOD2Q9NZR1 351 aa22.3■■□□□ 1.16
MMP28-201ENST00000605424 HERC5Q9UII4 1024 aaKnown RBP22.3■■□□□ 1.16
MMP28-201ENST00000605424 GOLGA6L9A6NEM1 432 aa22.29■■□□□ 1.16
MMP28-201ENST00000605424 C21orf2O43822 256 aa22.29■■□□□ 1.16
MMP28-201ENST00000605424 TNNI2P48788 182 aa22.29■■□□□ 1.16
MMP28-201ENST00000605424 KRT31Q15323 416 aa22.29■■□□□ 1.16
MMP28-201ENST00000605424 TCP11X2Q5H9J9 407 aa22.29■■□□□ 1.16
MMP28-201ENST00000605424 RBM26Q5T8P6 1007 aaKnown RBP22.29■■□□□ 1.16
MMP28-201ENST00000605424 PRMT6Q96LA8 375 aaPredicted RBP22.29■■□□□ 1.16
MMP28-201ENST00000605424 LRRC27Q9C0I9 530 aa22.29■■□□□ 1.16
MMP28-201ENST00000605424 TEX33O43247 280 aa22.29■■□□□ 1.16
MMP28-201ENST00000605424 SLC37A4O43826 429 aa22.29■■□□□ 1.16
MMP28-201ENST00000605424 TDP2O95551 362 aa22.29■■□□□ 1.16
MMP28-201ENST00000605424 QRICH1Q2TAL8 776 aa22.29■■□□□ 1.16
MMP28-201ENST00000605424 RSBN1LQ6PCB5 846 aaPredicted RBP22.29■■□□□ 1.16
MMP28-201ENST00000605424 LRRC15Q8TF66 581 aa22.29■■□□□ 1.16
MMP28-201ENST00000605424 ZNF592Q92610 1267 aa22.29■■□□□ 1.16
MMP28-201ENST00000605424 CCDC51Q96ER9 411 aa22.29■■□□□ 1.16
MMP28-201ENST00000605424 PLIN2Q99541 437 aa22.29■■□□□ 1.16
MMP28-201ENST00000605424 THAP9Q9H5L6 903 aa22.29■■□□□ 1.16
MMP28-201ENST00000605424 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.29■■□□□ 1.16
MMP28-201ENST00000605424 FAM196BA6NMK8 535 aa22.28■■□□□ 1.16
MMP28-201ENST00000605424 KCNJ18B7U540 433 aa22.28■■□□□ 1.16
MMP28-201ENST00000605424 F5H6K3 240 aa22.28■■□□□ 1.16
MMP28-201ENST00000605424 SLC26A4O43511 780 aa22.28■■□□□ 1.16
MMP28-201ENST00000605424 USP11P51784 963 aa22.28■■□□□ 1.16
MMP28-201ENST00000605424 KLRC3Q07444 240 aa22.28■■□□□ 1.16
MMP28-201ENST00000605424 KCNJ12Q14500 433 aa22.28■■□□□ 1.16
MMP28-201ENST00000605424 SV2BQ7L1I2 683 aa22.28■■□□□ 1.16
MMP28-201ENST00000605424 EXOC1Q9NV70 894 aa22.28■■□□□ 1.16
MMP28-201ENST00000605424 DDX25Q9UHL0 483 aaKnown RBP22.28■■□□□ 1.16
MMP28-201ENST00000605424 HDAC9Q9UKV0 1011 aa22.28■■□□□ 1.16
MMP28-201ENST00000605424 N4BP3O15049 544 aa22.27■■□□□ 1.16
MMP28-201ENST00000605424 TPM1P09493 284 aa22.27■■□□□ 1.16
MMP28-201ENST00000605424 SLURP2P0DP57 97 aa22.27■■□□□ 1.16
MMP28-201ENST00000605424 EEF1GP26641 437 aaKnown RBP22.27■■□□□ 1.16
MMP28-201ENST00000605424 COPB1P53618 953 aaKnown RBP22.27■■□□□ 1.16
MMP28-201ENST00000605424 AP3B2Q13367 1082 aa22.27■■□□□ 1.16
MMP28-201ENST00000605424 TRIM14Q14142 442 aa22.27■■□□□ 1.16
MMP28-201ENST00000605424 CDC37Q16543 378 aaPredicted RBP22.27■■□□□ 1.16
MMP28-201ENST00000605424 UBE2SQ16763 222 aa22.27■■□□□ 1.16
MMP28-201ENST00000605424 KRT79Q5XKE5 535 aa22.27■■□□□ 1.16
MMP28-201ENST00000605424 TEX2Q8IWB9 1127 aa22.27■■□□□ 1.16
MMP28-201ENST00000605424 CDK5RAP3Q96JB5 506 aa22.27■■□□□ 1.16
MMP28-201ENST00000605424 PCDHA1Q9Y5I3 950 aa22.27■■□□□ 1.16
MMP28-201ENST00000605424 BICDL2A1A5D9 508 aa22.27■■□□□ 1.16
MMP28-201ENST00000605424 VIL1P09327 827 aaKnown RBP22.27■■□□□ 1.16
MMP28-201ENST00000605424 ADKP55263 362 aaKnown RBP22.27■■□□□ 1.16
MMP28-201ENST00000605424 GRB10Q13322 594 aa22.27■■□□□ 1.16
MMP28-201ENST00000605424 CNNM4Q6P4Q7 775 aa22.27■■□□□ 1.16
MMP28-201ENST00000605424 MOXD1Q6UVY6 613 aa22.27■■□□□ 1.16
MMP28-201ENST00000605424 CNGA4Q8IV77 575 aa22.27■■□□□ 1.16
MMP28-201ENST00000605424 ARFGEF1Q9Y6D6 1849 aa22.26■■□□□ 1.15
MMP28-201ENST00000605424 PVALEFA0A1B0GWK0 134 aa22.26■■□□□ 1.15
MMP28-201ENST00000605424 PDE4DQ08499 809 aa22.26■■□□□ 1.15
MMP28-201ENST00000605424 PTPN21Q16825 1174 aa22.26■■□□□ 1.15
MMP28-201ENST00000605424 CSRNP1Q96S65 589 aa22.26■■□□□ 1.15
MMP28-201ENST00000605424 AMNQ9BXJ7 453 aa22.26■■□□□ 1.15
MMP28-201ENST00000605424 CYP3A7-CYP3A51PA0A087WV96 503 aa22.25■■□□□ 1.15
MMP28-201ENST00000605424 SPDYE2BA6NHP3 402 aa22.25■■□□□ 1.15
MMP28-201ENST00000605424 SPDYE6P0CI01 402 aa22.25■■□□□ 1.15
MMP28-201ENST00000605424 CYP3A7P24462 503 aa22.25■■□□□ 1.15
MMP28-201ENST00000605424 ASIC1P78348 528 aa22.25■■□□□ 1.15
MMP28-201ENST00000605424 HSP90AA2PQ14568 343 aaPredicted RBP22.25■■□□□ 1.15
MMP28-201ENST00000605424 BTNL9Q6UXG8 535 aa22.25■■□□□ 1.15
MMP28-201ENST00000605424 PDCL3Q9H2J4 239 aa22.25■■□□□ 1.15
MMP28-201ENST00000605424 POLD1P28340 1107 aa22.25■■□□□ 1.15
MMP28-201ENST00000605424 ETF1P62495 437 aaKnown RBP22.25■■□□□ 1.15
MMP28-201ENST00000605424 GOLGA8FQ08AF8 430 aa22.25■■□□□ 1.15
MMP28-201ENST00000605424 GOLGA8DPQ0D2H9 430 aa22.25■■□□□ 1.15
MMP28-201ENST00000605424 REXO1L1PQ8IX06 675 aa22.25■■□□□ 1.15
MMP28-201ENST00000605424 LARP4BQ92615 738 aaKnown RBP22.25■■□□□ 1.15
MMP28-201ENST00000605424 GMLQ99445 158 aa22.25■■□□□ 1.15
MMP28-201ENST00000605424 BLOC1S4Q9NUP1 217 aa22.25■■□□□ 1.15
MMP28-201ENST00000605424 MAPK8IP1Q9UQF2 711 aa22.25■■□□□ 1.15
MMP28-201ENST00000605424 PPP2R2CQ9Y2T4 447 aa22.25■■□□□ 1.15
MMP28-201ENST00000605424 RAD21O60216 631 aa22.24■■□□□ 1.15
MMP28-201ENST00000605424 GDF11O95390 407 aa22.24■■□□□ 1.15
MMP28-201ENST00000605424 NDUFB10O96000 172 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms