RNA–Protein interactions for RNA: ENST00000604859.1

NEK4P3-201, Transcript of NIMA-related kinase 4 pseudogene 3, humanhuman

BASIC

Gene NEK4P3, Length 544 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P3-201ENST00000604859 SUPT20HL2P0C7V6 817 aa15.15■□□□□ 0.02
NEK4P3-201ENST00000604859 TOP1P11387 765 aaKnown RBP15.15■□□□□ 0.02
NEK4P3-201ENST00000604859 IGFBP4P22692 258 aa15.15■□□□□ 0.02
NEK4P3-201ENST00000604859 ALDH5A1P51649 535 aaPredicted RBP15.15■□□□□ 0.02
NEK4P3-201ENST00000604859 ADGRE1Q14246 886 aa15.15■□□□□ 0.02
NEK4P3-201ENST00000604859 PWP2Q15269 919 aaKnown RBP15.15■□□□□ 0.02
NEK4P3-201ENST00000604859 EVI5LQ96CN4 794 aa15.15■□□□□ 0.02
NEK4P3-201ENST00000604859 TMEM47Q9BQJ4 181 aa15.15■□□□□ 0.02
NEK4P3-201ENST00000604859 WNT8AQ9H1J5 351 aa15.15■□□□□ 0.02
NEK4P3-201ENST00000604859 ALDH8A1Q9H2A2 487 aaPredicted RBP15.15■□□□□ 0.02
NEK4P3-201ENST00000604859 HELLSQ9NRZ9 838 aa15.15■□□□□ 0.02
NEK4P3-201ENST00000604859 YBX2Q9Y2T7 364 aaKnown RBP15.15■□□□□ 0.02
NEK4P3-201ENST00000604859 SALL3Q9BXA9 1300 aa15.15■□□□□ 0.02
NEK4P3-201ENST00000604859 CHD9Q3L8U1 2897 aa15.14■□□□□ 0.01
NEK4P3-201ENST00000604859 TNFRSF10AO00220 468 aa15.14■□□□□ 0.01
NEK4P3-201ENST00000604859 FGAP02671 866 aa15.14■□□□□ 0.01
NEK4P3-201ENST00000604859 CCDC85BQ15834 202 aaPredicted RBP15.14■□□□□ 0.01
NEK4P3-201ENST00000604859 SYDE2Q5VT97 1194 aa15.14■□□□□ 0.01
NEK4P3-201ENST00000604859 SCLYQ96I15 445 aa15.14■□□□□ 0.01
NEK4P3-201ENST00000604859 GPCPD1Q9NPB8 672 aa15.14■□□□□ 0.01
NEK4P3-201ENST00000604859 TOMM22Q9NS69 142 aa15.14■□□□□ 0.01
NEK4P3-201ENST00000604859 TCP11L1Q9NUJ3 509 aa15.14■□□□□ 0.01
NEK4P3-201ENST00000604859 POLR3EQ9NVU0 708 aa15.14■□□□□ 0.01
NEK4P3-201ENST00000604859 ZBTB47Q9UFB7 747 aaPredicted RBP15.14■□□□□ 0.01
NEK4P3-201ENST00000604859 SLC4A7Q9Y6M7 1214 aa15.14■□□□□ 0.01
NEK4P3-201ENST00000604859 RBM47A0AV96 593 aaKnown RBP15.13■□□□□ 0.01
NEK4P3-201ENST00000604859 PTPDC1A2A3K4 754 aa15.13■□□□□ 0.01
NEK4P3-201ENST00000604859 NFIBO00712 420 aa15.13■□□□□ 0.01
NEK4P3-201ENST00000604859 CPT1AP50416 773 aa15.13■□□□□ 0.01
NEK4P3-201ENST00000604859 RABGGTBP53611 331 aa15.13■□□□□ 0.01
NEK4P3-201ENST00000604859 MRPS5P82675 430 aaKnown RBP15.13■□□□□ 0.01
NEK4P3-201ENST00000604859 PURAQ00577 322 aaKnown RBP15.13■□□□□ 0.01
NEK4P3-201ENST00000604859 RRP12Q5JTH9 1297 aaKnown RBP15.13■□□□□ 0.01
NEK4P3-201ENST00000604859 ANKRD45Q5TZF3 282 aa15.13■□□□□ 0.01
NEK4P3-201ENST00000604859 VWCEQ96DN2 955 aa15.13■□□□□ 0.01
NEK4P3-201ENST00000604859 ASB2Q96Q27 587 aa15.13■□□□□ 0.01
NEK4P3-201ENST00000604859 GPHNQ9NQX3 736 aaPredicted RBP15.13■□□□□ 0.01
NEK4P3-201ENST00000604859 TRMT13Q9NUP7 481 aaKnown RBP15.13■□□□□ 0.01
NEK4P3-201ENST00000604859 THEGQ9P2T0 379 aa15.13■□□□□ 0.01
NEK4P3-201ENST00000604859 FRMPD2Q68DX3 1309 aaPredicted RBP15.13■□□□□ 0.01
NEK4P3-201ENST00000604859 ZBBXA8MT70 800 aa15.12■□□□□ 0.01
NEK4P3-201ENST00000604859 PFKMP08237 780 aa15.12■□□□□ 0.01
NEK4P3-201ENST00000604859 MYL3P08590 195 aa15.12■□□□□ 0.01
NEK4P3-201ENST00000604859 CALML3P27482 149 aa15.12■□□□□ 0.01
NEK4P3-201ENST00000604859 MCMDC2Q4G0Z9 681 aa15.12■□□□□ 0.01
NEK4P3-201ENST00000604859 RNF207Q6ZRF8 634 aa15.12■□□□□ 0.01
NEK4P3-201ENST00000604859 OR6J1Q8NGC5 347 aa15.12■□□□□ 0.01
NEK4P3-201ENST00000604859 CLEC4DQ8WXI8 215 aa15.12■□□□□ 0.01
NEK4P3-201ENST00000604859 MTG1Q9BT17 334 aaPredicted RBP15.12■□□□□ 0.01
NEK4P3-201ENST00000604859 PNMA2Q9UL42 364 aa15.12■□□□□ 0.01
NEK4P3-201ENST00000604859 PCDHA11Q9Y5I1 949 aa15.12■□□□□ 0.01
NEK4P3-201ENST00000604859 SCN5AQ14524 2016 aa15.12■□□□□ 0.01
NEK4P3-201ENST00000604859 TNKSO95271 1327 aa15.12■□□□□ 0.01
NEK4P3-201ENST00000604859 CHD7Q9P2D1 2997 aa15.11■□□□□ 0.01
NEK4P3-201ENST00000604859 NKRFO15226 690 aaKnown RBP eCLIP15.11■□□□□ 0.01
NEK4P3-201ENST00000604859 PDHBP11177 359 aa15.11■□□□□ 0.01
NEK4P3-201ENST00000604859 CYP2C9P11712 490 aa15.11■□□□□ 0.01
NEK4P3-201ENST00000604859 MYOGP15173 224 aa15.11■□□□□ 0.01
NEK4P3-201ENST00000604859 ATP2A2P16615 1042 aaKnown RBP15.11■□□□□ 0.01
NEK4P3-201ENST00000604859 BRDTQ58F21 947 aaPredicted RBP15.11■□□□□ 0.01
NEK4P3-201ENST00000604859 SLC30A10Q6XR72 485 aa15.11■□□□□ 0.01
NEK4P3-201ENST00000604859 TICAM2Q86XR7 235 aa15.11■□□□□ 0.01
NEK4P3-201ENST00000604859 FAM227BQ96M60 508 aa15.11■□□□□ 0.01
NEK4P3-201ENST00000604859 TTC14Q96N46 770 aa15.11■□□□□ 0.01
NEK4P3-201ENST00000604859 MPHOSPH6Q99547 160 aaKnown RBP15.11■□□□□ 0.01
NEK4P3-201ENST00000604859 SCN10AQ9Y5Y9 1956 aa15.11■□□□□ 0.01
NEK4P3-201ENST00000604859 KPNA6O60684 536 aa15.1■□□□□ 0.01
NEK4P3-201ENST00000604859 HSPD1P10809 573 aaKnown RBP15.1■□□□□ 0.01
NEK4P3-201ENST00000604859 PDE1AP54750 535 aa15.1■□□□□ 0.01
NEK4P3-201ENST00000604859 PDE4DQ08499 809 aa15.1■□□□□ 0.01
NEK4P3-201ENST00000604859 TTLL4Q14679 1199 aa15.1■□□□□ 0.01
NEK4P3-201ENST00000604859 NBPF20Q3BBV1 942 aa15.1■□□□□ 0.01
NEK4P3-201ENST00000604859 PPP2R2DQ66LE6 453 aa15.1■□□□□ 0.01
NEK4P3-201ENST00000604859 DEFB128Q7Z7B8 93 aa15.1■□□□□ 0.01
NEK4P3-201ENST00000604859 DNERQ8NFT8 737 aa15.1■□□□□ 0.01
NEK4P3-201ENST00000604859 TRIP12Q14669 1992 aaPredicted RBP15.1■□□□□ 0.01
NEK4P3-201ENST00000604859 RAD50Q92878 1312 aa15.1■□□□□ 0.01
NEK4P3-201ENST00000604859 A0A0D9SFI3 127 aa15.09■□□□□ 0.01
NEK4P3-201ENST00000604859 A6NJR5 290 aa15.09■□□□□ 0.01
NEK4P3-201ENST00000604859 B4DLN1 442 aa15.09■□□□□ 0.01
NEK4P3-201ENST00000604859 EDNRBP24530 442 aa15.09■□□□□ 0.01
NEK4P3-201ENST00000604859 MRPL12P52815 198 aaKnown RBP15.09■□□□□ 0.01
NEK4P3-201ENST00000604859 RPS6P62753 249 aaKnown RBP15.09■□□□□ 0.01
NEK4P3-201ENST00000604859 ZNF543Q08ER8 600 aa15.09■□□□□ 0.01
NEK4P3-201ENST00000604859 PPP2R5BQ15173 497 aa15.09■□□□□ 0.01
NEK4P3-201ENST00000604859 FAM47CQ5HY64 1035 aa15.09■□□□□ 0.01
NEK4P3-201ENST00000604859 TMEM67Q5HYA8 995 aa15.09■□□□□ 0.01
NEK4P3-201ENST00000604859 NFRKBQ6P4R8 1299 aa15.09■□□□□ 0.01
NEK4P3-201ENST00000604859 MFSD6Q6ZSS7 791 aa15.09■□□□□ 0.01
NEK4P3-201ENST00000604859 SCFD2Q8WU76 684 aa15.09■□□□□ 0.01
NEK4P3-201ENST00000604859 TSPYL2Q9H2G4 693 aaPredicted RBP15.09■□□□□ 0.01
NEK4P3-201ENST00000604859 NCOR1O75376 2440 aa15.09■□□□□ 0.01
NEK4P3-201ENST00000604859 ZMYM6O95789 1325 aa15.09■□□□□ 0.01
NEK4P3-201ENST00000604859 XIRP2A4UGR9 3374 aa15.08■□□□□ 0.01
NEK4P3-201ENST00000604859 TCF20Q9UGU0 1960 aaKnown RBP15.08■□□□□ 0
NEK4P3-201ENST00000604859 SNHG28P0DPA3 235 aa15.08■□□□□ 0
NEK4P3-201ENST00000604859 TXNP10599 105 aaKnown RBP15.08■□□□□ 0
NEK4P3-201ENST00000604859 PCP11498 1178 aaKnown RBP15.08■□□□□ 0
NEK4P3-201ENST00000604859 ACTN1P12814 892 aa15.08■□□□□ 0
NEK4P3-201ENST00000604859 RFC2P35250 354 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms