RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 IDEP14735 1019 aa7.19□□□□□ -1.26
SRGAP2-211ENST00000604423 KRT9P35527 623 aa7.19□□□□□ -1.26
SRGAP2-211ENST00000604423 IARSP41252 1262 aaKnown RBP7.19□□□□□ -1.26
SRGAP2-211ENST00000604423 SARSP49591 514 aaKnown RBP7.19□□□□□ -1.26
SRGAP2-211ENST00000604423 CLNS1AP54105 237 aaKnown RBP7.19□□□□□ -1.26
SRGAP2-211ENST00000604423 EPHB4P54760 987 aa7.19□□□□□ -1.26
SRGAP2-211ENST00000604423 C2orf54Q08AI8 447 aa7.19□□□□□ -1.26
SRGAP2-211ENST00000604423 AKAP4Q5JQC9 854 aa7.19□□□□□ -1.26
SRGAP2-211ENST00000604423 ALS2CLQ60I27 953 aa7.19□□□□□ -1.26
SRGAP2-211ENST00000604423 NFXL1Q6ZNB6 911 aa7.19□□□□□ -1.26
SRGAP2-211ENST00000604423 UBE3BQ7Z3V4 1068 aa7.19□□□□□ -1.26
SRGAP2-211ENST00000604423 YTHDF3Q7Z739 585 aaKnown RBP7.19□□□□□ -1.26
SRGAP2-211ENST00000604423 MICU3Q86XE3 530 aa7.19□□□□□ -1.26
SRGAP2-211ENST00000604423 CEP57Q86XR8 500 aa7.19□□□□□ -1.26
SRGAP2-211ENST00000604423 MB21D2Q8IYB1 491 aaPredicted RBP7.19□□□□□ -1.26
SRGAP2-211ENST00000604423 GRAMD1CQ8IYS0 662 aa7.19□□□□□ -1.26
SRGAP2-211ENST00000604423 AENQ8WTP8 325 aaKnown RBP7.19□□□□□ -1.26
SRGAP2-211ENST00000604423 AIFM3Q96NN9 605 aa7.19□□□□□ -1.26
SRGAP2-211ENST00000604423 MYD88Q99836 296 aa7.19□□□□□ -1.26
SRGAP2-211ENST00000604423 RBM28Q9NW13 759 aaKnown RBP7.19□□□□□ -1.26
SRGAP2-211ENST00000604423 CTNND2Q9UQB3 1225 aa7.19□□□□□ -1.26
SRGAP2-211ENST00000604423 EPN1Q9Y6I3 576 aaPredicted RBP7.19□□□□□ -1.26
SRGAP2-211ENST00000604423 MYH13Q9UKX3 1938 aa7.19□□□□□ -1.26
SRGAP2-211ENST00000604423 RGPD8O14715 1765 aaPredicted RBP7.19□□□□□ -1.26
SRGAP2-211ENST00000604423 WDR17Q8IZU2 1322 aa7.19□□□□□ -1.26
SRGAP2-211ENST00000604423 ANO9A1A5B4 782 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 ABL1P00519 1130 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 EPB41P11171 864 aaKnown RBP7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 IBSPP21815 317 aaPredicted RBP7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 CYLC1P35663 651 aaPredicted RBP7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 FNTAP49354 379 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 ATP1A2P50993 1020 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 NAP1L1P55209 391 aaKnown RBP7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 PTPN12Q05209 780 aaKnown RBP7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 DRP2Q13474 957 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 GCKRQ14397 625 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 CRYMQ14894 314 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 RILPL1Q5EBL4 403 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 CCDC181Q5TID7 509 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 CDKAL1Q5VV42 579 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 PAPD7Q5XG87 772 aaKnown RBP7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 CCDC121Q6ZUS5 278 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 NOSTRINQ8IVI9 506 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 PHKBQ93100 1093 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 AIDAQ96BJ3 306 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 CCDC114Q96M63 670 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 SH3GL2Q99962 352 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 TRIM6Q9C030 488 aaPredicted RBP7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 ACTR5Q9H9F9 607 aaPredicted RBP7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 DDX21Q9NR30 783 aaKnown RBP eCLIP7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 BCCIPQ9P287 314 aaKnown RBP eCLIP7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 CEP126Q9P2H0 1117 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 TRIM10Q9UDY6 481 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 ANGEL1Q9UNK9 670 aaKnown RBP7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 GOLGA8AA7E2F4 631 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 PES1O00541 588 aaKnown RBP7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 IGKV5-2P06315 115 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 MYBL2P10244 700 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 AFMP43652 599 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 SMTNP53814 917 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 IRX1P78414 480 aaPredicted RBP7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 APBA1Q02410 837 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 ACTN3Q08043 901 aaPredicted RBP7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 SSRP1Q08945 709 aaKnown RBP7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 EPHA10Q5JZY3 1008 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 NAA35Q5VZE5 725 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 CC2D2BQ6DHV5 1058 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 EMBQ6PCB8 327 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 MPRIPQ6WCQ1 1025 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 APTXQ7Z2E3 356 aaKnown RBP7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 C14orf37Q86TY3 774 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 FNBP4Q8N3X1 1017 aaPredicted RBP7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 ZNF473Q8WTR7 871 aaKnown RBP7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 RRP36Q96EU6 259 aaKnown RBP7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 XAGE2Q96GT9 111 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 SCLT1Q96NL6 688 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 CDCA7Q9BWT1 371 aaPredicted RBP7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 EPN3Q9H201 632 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 VPS16Q9H269 839 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 ZNHIT6Q9NWK9 470 aaKnown RBP7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 FBXO2Q9UK22 296 aaPredicted RBP7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 MYH7P12883 1935 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 PLEKHG1Q9ULL1 1385 aa7.18□□□□□ -1.26
SRGAP2-211ENST00000604423 USP54Q70EL1 1684 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 GOLGA6L10A6NI86 522 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 ATP5J2-PTCD1G3V325 749 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 MEN1O00255 615 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 ZBTB43O43298 467 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 ZFYP08048 801 aaPredicted RBP7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 MYL6BP14649 208 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 RXRAP19793 462 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 SLC8A1P32418 973 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 GBP2P32456 591 aaPredicted RBP7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 LSP1P33241 339 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 PTGIRP43119 386 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 COPB1P53618 953 aaKnown RBP7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 SARNPP82979 210 aaKnown RBP7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 ATP2B2Q01814 1243 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 PTSQ03393 145 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms