RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 MAML3Q96JK9 1138 aa10.93□□□□□ -0.66
SQSTM1P1-201ENST00000603451 VAT1LQ9HCJ6 419 aa10.93□□□□□ -0.66
SQSTM1P1-201ENST00000603451 GABRQQ9UN88 632 aa10.93□□□□□ -0.66
SQSTM1P1-201ENST00000603451 PTCH2Q9Y6C5 1203 aa10.93□□□□□ -0.66
SQSTM1P1-201ENST00000603451 FRMPD4Q14CM0 1322 aa10.92□□□□□ -0.66
SQSTM1P1-201ENST00000603451 SNAP25P60880 206 aa10.92□□□□□ -0.66
SQSTM1P1-201ENST00000603451 UBXN2AP68543 259 aa10.92□□□□□ -0.66
SQSTM1P1-201ENST00000603451 CCT2P78371 535 aaKnown RBP10.92□□□□□ -0.66
SQSTM1P1-201ENST00000603451 HMGN5P82970 282 aaKnown RBP10.92□□□□□ -0.66
SQSTM1P1-201ENST00000603451 MFSD14CQ5VZR4 134 aa10.92□□□□□ -0.66
SQSTM1P1-201ENST00000603451 GALNT17Q6IS24 598 aa10.92□□□□□ -0.66
SQSTM1P1-201ENST00000603451 NSMFQ6X4W1 530 aa10.92□□□□□ -0.66
SQSTM1P1-201ENST00000603451 HEATR3Q7Z4Q2 680 aa10.92□□□□□ -0.66
SQSTM1P1-201ENST00000603451 BICD2Q8TD16 824 aa10.92□□□□□ -0.66
SQSTM1P1-201ENST00000603451 MORC4Q8TE76 937 aa10.92□□□□□ -0.66
SQSTM1P1-201ENST00000603451 MCOLN1Q9GZU1 580 aa10.92□□□□□ -0.66
SQSTM1P1-201ENST00000603451 NCOA5Q9HCD5 579 aaKnown RBP10.92□□□□□ -0.66
SQSTM1P1-201ENST00000603451 KIF3AQ9Y496 699 aa10.92□□□□□ -0.66
SQSTM1P1-201ENST00000603451 V9GY48 417 aaPredicted RBP10.92□□□□□ -0.66
SQSTM1P1-201ENST00000603451 FRMPD3Q5JV73 1810 aa10.91□□□□□ -0.66
SQSTM1P1-201ENST00000603451 PTPDC1A2A3K4 754 aa10.91□□□□□ -0.66
SQSTM1P1-201ENST00000603451 GCOM1H8Y6P7 765 aaPredicted RBP10.91□□□□□ -0.66
SQSTM1P1-201ENST00000603451 OPLAHO14841 1288 aa10.91□□□□□ -0.66
SQSTM1P1-201ENST00000603451 FOSP01100 380 aaPredicted RBP10.91□□□□□ -0.66
SQSTM1P1-201ENST00000603451 POLR2MP0CAP2 368 aa10.91□□□□□ -0.66
SQSTM1P1-201ENST00000603451 GNA11P29992 359 aa10.91□□□□□ -0.66
SQSTM1P1-201ENST00000603451 NAPAP54920 295 aa10.91□□□□□ -0.66
SQSTM1P1-201ENST00000603451 RPS6P62753 249 aaKnown RBP10.91□□□□□ -0.66
SQSTM1P1-201ENST00000603451 STK3Q13188 491 aa10.91□□□□□ -0.66
SQSTM1P1-201ENST00000603451 AP3B2Q13367 1082 aa10.91□□□□□ -0.66
SQSTM1P1-201ENST00000603451 MAP3K21Q5TCX8 1036 aa10.91□□□□□ -0.66
SQSTM1P1-201ENST00000603451 WWC2Q6AWC2 1192 aa10.91□□□□□ -0.66
SQSTM1P1-201ENST00000603451 XRRA1Q6P2D8 792 aa10.91□□□□□ -0.66
SQSTM1P1-201ENST00000603451 CMTR1Q8N1G2 835 aaKnown RBP10.91□□□□□ -0.66
SQSTM1P1-201ENST00000603451 CCDC82Q8N4S0 544 aa10.91□□□□□ -0.66
SQSTM1P1-201ENST00000603451 TRIB2Q92519 343 aa10.91□□□□□ -0.66
SQSTM1P1-201ENST00000603451 CUL5Q93034 780 aa10.91□□□□□ -0.66
SQSTM1P1-201ENST00000603451 IWS1Q96ST2 819 aa10.91□□□□□ -0.66
SQSTM1P1-201ENST00000603451 TINF2Q9BSI4 451 aa10.91□□□□□ -0.66
SQSTM1P1-201ENST00000603451 SLC26A6Q9BXS9 759 aa10.91□□□□□ -0.66
SQSTM1P1-201ENST00000603451 ZMYND12Q9H0C1 365 aa10.91□□□□□ -0.66
SQSTM1P1-201ENST00000603451 EHMT1Q9H9B1 1298 aa10.91□□□□□ -0.66
SQSTM1P1-201ENST00000603451 HTTP42858 3142 aa10.91□□□□□ -0.66
SQSTM1P1-201ENST00000603451 KIAA1217Q5T5P2 1943 aa10.9□□□□□ -0.66
SQSTM1P1-201ENST00000603451 STXBP3O00186 592 aa10.9□□□□□ -0.66
SQSTM1P1-201ENST00000603451 MSCO60682 206 aa10.9□□□□□ -0.66
SQSTM1P1-201ENST00000603451 COBLO75128 1261 aa10.9□□□□□ -0.66
SQSTM1P1-201ENST00000603451 STAM2O75886 525 aa10.9□□□□□ -0.66
SQSTM1P1-201ENST00000603451 LARGE1O95461 756 aa10.9□□□□□ -0.66
SQSTM1P1-201ENST00000603451 CFBP00751 764 aa10.9□□□□□ -0.66
SQSTM1P1-201ENST00000603451 PGK2P07205 417 aa10.9□□□□□ -0.66
SQSTM1P1-201ENST00000603451 CYP2B6P20813 491 aa10.9□□□□□ -0.66
SQSTM1P1-201ENST00000603451 EDNRBP24530 442 aa10.9□□□□□ -0.66
SQSTM1P1-201ENST00000603451 CALML3P27482 149 aa10.9□□□□□ -0.66
SQSTM1P1-201ENST00000603451 SLC4A3P48751 1232 aa10.9□□□□□ -0.66
SQSTM1P1-201ENST00000603451 ADCY7P51828 1080 aa10.9□□□□□ -0.66
SQSTM1P1-201ENST00000603451 BAATQ14032 418 aaPredicted RBP10.9□□□□□ -0.66
SQSTM1P1-201ENST00000603451 PKN1Q16512 942 aa10.9□□□□□ -0.66
SQSTM1P1-201ENST00000603451 SLC30A10Q6XR72 485 aa10.9□□□□□ -0.66
SQSTM1P1-201ENST00000603451 NSUN7Q8NE18 718 aaKnown RBP10.9□□□□□ -0.66
SQSTM1P1-201ENST00000603451 SMARCC2Q8TAQ2 1214 aa10.9□□□□□ -0.66
SQSTM1P1-201ENST00000603451 NSUN6Q8TEA1 469 aaKnown RBP10.9□□□□□ -0.66
SQSTM1P1-201ENST00000603451 PHKBQ93100 1093 aa10.9□□□□□ -0.66
SQSTM1P1-201ENST00000603451 SNX21Q969T3 373 aa10.9□□□□□ -0.66
SQSTM1P1-201ENST00000603451 ZNF333Q96JL9 665 aa10.9□□□□□ -0.66
SQSTM1P1-201ENST00000603451 PSTPIP2Q9H939 334 aa10.9□□□□□ -0.66
SQSTM1P1-201ENST00000603451 C6orf50Q9HD87 102 aa10.9□□□□□ -0.66
SQSTM1P1-201ENST00000603451 RIC8AQ9NPQ8 531 aa10.9□□□□□ -0.66
SQSTM1P1-201ENST00000603451 CNPY2Q9Y2B0 182 aa10.9□□□□□ -0.66
SQSTM1P1-201ENST00000603451 MCM3APO60318 1980 aa10.9□□□□□ -0.66
SQSTM1P1-201ENST00000603451 RPTORQ8N122 1335 aa10.89□□□□□ -0.67
SQSTM1P1-201ENST00000603451 INHAP05111 366 aa10.89□□□□□ -0.67
SQSTM1P1-201ENST00000603451 CYBAP13498 195 aa10.89□□□□□ -0.67
SQSTM1P1-201ENST00000603451 ALDH5A1P51649 535 aaPredicted RBP10.89□□□□□ -0.67
SQSTM1P1-201ENST00000603451 COL13A1Q5TAT6 717 aaPredicted RBP10.89□□□□□ -0.67
SQSTM1P1-201ENST00000603451 DAGLBQ8NCG7 672 aa10.89□□□□□ -0.67
SQSTM1P1-201ENST00000603451 NPLOC4Q8TAT6 608 aa10.89□□□□□ -0.67
SQSTM1P1-201ENST00000603451 SYTL5Q8TDW5 730 aaPredicted RBP10.89□□□□□ -0.67
SQSTM1P1-201ENST00000603451 TMX3Q96JJ7 454 aa10.89□□□□□ -0.67
SQSTM1P1-201ENST00000603451 ABHD16BQ9H3Z7 469 aa10.89□□□□□ -0.67
SQSTM1P1-201ENST00000603451 VTA1Q9NP79 307 aa10.89□□□□□ -0.67
SQSTM1P1-201ENST00000603451 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.89□□□□□ -0.67
SQSTM1P1-201ENST00000603451 SPDYE3A6NKU9 549 aa10.88□□□□□ -0.67
SQSTM1P1-201ENST00000603451 MEIS2O14770 477 aa10.88□□□□□ -0.67
SQSTM1P1-201ENST00000603451 CTDNEP1O95476 244 aa10.88□□□□□ -0.67
SQSTM1P1-201ENST00000603451 PRKAR2AP13861 404 aaKnown RBP10.88□□□□□ -0.67
SQSTM1P1-201ENST00000603451 ELNP15502 786 aa10.88□□□□□ -0.67
SQSTM1P1-201ENST00000603451 CLK2P49760 499 aaKnown RBP10.88□□□□□ -0.67
SQSTM1P1-201ENST00000603451 CNTN2Q02246 1040 aa10.88□□□□□ -0.67
SQSTM1P1-201ENST00000603451 NOL8Q76FK4 1167 aaKnown RBP10.88□□□□□ -0.67
SQSTM1P1-201ENST00000603451 ARMCX2Q7L311 632 aa10.88□□□□□ -0.67
SQSTM1P1-201ENST00000603451 REXO1Q8N1G1 1221 aaKnown RBP10.88□□□□□ -0.67
SQSTM1P1-201ENST00000603451 PIBF1Q8WXW3 757 aa10.88□□□□□ -0.67
SQSTM1P1-201ENST00000603451 GPKOWQ92917 476 aaPredicted RBP eCLIP10.88□□□□□ -0.67
SQSTM1P1-201ENST00000603451 INTS4Q96HW7 963 aaKnown RBP10.88□□□□□ -0.67
SQSTM1P1-201ENST00000603451 FGD4Q96M96 766 aa10.88□□□□□ -0.67
SQSTM1P1-201ENST00000603451 RMDN3Q96TC7 470 aa10.88□□□□□ -0.67
SQSTM1P1-201ENST00000603451 HMX1Q9NP08 348 aaPredicted RBP10.88□□□□□ -0.67
SQSTM1P1-201ENST00000603451 PAK6Q9NQU5 681 aaPredicted RBP10.88□□□□□ -0.67
SQSTM1P1-201ENST00000603451 PXMP2Q9NR77 195 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms