RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 ZNF180Q9UJW8 692 aa9.75□□□□□ -0.85
COMMD3-215ENST00000602574 SCINQ9Y6U3 715 aa9.75□□□□□ -0.85
COMMD3-215ENST00000602574 BCL9O00512 1426 aa9.74□□□□□ -0.85
COMMD3-215ENST00000602574 ANKRD26Q9UPS8 1709 aa9.74□□□□□ -0.85
COMMD3-215ENST00000602574 C5orf60A6NFR6 353 aa9.74□□□□□ -0.85
COMMD3-215ENST00000602574 AGPSO00116 658 aa9.74□□□□□ -0.85
COMMD3-215ENST00000602574 DNM1LO00429 736 aa9.74□□□□□ -0.85
COMMD3-215ENST00000602574 CYP1A2P05177 515 aa9.74□□□□□ -0.85
COMMD3-215ENST00000602574 ACADSP16219 412 aa9.74□□□□□ -0.85
COMMD3-215ENST00000602574 ATP6V1C1P21283 382 aa9.74□□□□□ -0.85
COMMD3-215ENST00000602574 LSP1P33241 339 aa9.74□□□□□ -0.85
COMMD3-215ENST00000602574 COG2Q14746 738 aa9.74□□□□□ -0.85
COMMD3-215ENST00000602574 NDUFA5Q16718 116 aa9.74□□□□□ -0.85
COMMD3-215ENST00000602574 ME3Q16798 604 aa9.74□□□□□ -0.85
COMMD3-215ENST00000602574 ARHGAP27Q6ZUM4 889 aa9.74□□□□□ -0.85
COMMD3-215ENST00000602574 UBE3BQ7Z3V4 1068 aa9.74□□□□□ -0.85
COMMD3-215ENST00000602574 NDUFAF2Q8N183 169 aa9.74□□□□□ -0.85
COMMD3-215ENST00000602574 TMCO5AQ8N6Q1 288 aa9.74□□□□□ -0.85
COMMD3-215ENST00000602574 LINC00469Q8N7U9 141 aa9.74□□□□□ -0.85
COMMD3-215ENST00000602574 ZC3H15Q8WU90 426 aaKnown RBP9.74□□□□□ -0.85
COMMD3-215ENST00000602574 DHX58Q96C10 678 aa9.74□□□□□ -0.85
COMMD3-215ENST00000602574 SDCCAG3Q96C92 435 aa9.74□□□□□ -0.85
COMMD3-215ENST00000602574 GDAP1L1Q96MZ0 367 aa9.74□□□□□ -0.85
COMMD3-215ENST00000602574 OSBPL7Q9BZF2 842 aa9.74□□□□□ -0.85
COMMD3-215ENST00000602574 SEMA4AQ9H3S1 761 aa9.74□□□□□ -0.85
COMMD3-215ENST00000602574 SUGCTQ9HAC7 445 aa9.74□□□□□ -0.85
COMMD3-215ENST00000602574 KCNMB3Q9NPA1 279 aa9.74□□□□□ -0.85
COMMD3-215ENST00000602574 TYW1Q9NV66 732 aaKnown RBP9.74□□□□□ -0.85
COMMD3-215ENST00000602574 NR2E3Q9Y5X4 410 aa9.74□□□□□ -0.85
COMMD3-215ENST00000602574 SSH2Q76I76 1423 aa9.74□□□□□ -0.85
COMMD3-215ENST00000602574 TRAPPC8Q9Y2L5 1435 aa9.74□□□□□ -0.85
COMMD3-215ENST00000602574 SYCP2Q9BX26 1530 aa9.74□□□□□ -0.85
COMMD3-215ENST00000602574 A0A0J9YVX5 310 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 TNFRSF10AO00220 468 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 ARHGAP6O43182 974 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 PPIP5K2O43314 1243 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 B3GALNT1O75752 331 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 KRT14P02533 472 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 PTPN2P17706 415 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 GSTT1P30711 240 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 GGCXP38435 758 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 ETV3P41162 512 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 HALP42357 657 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 STX1AQ16623 288 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 SKIDA1Q1XH10 827 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 SHROOM1Q2M3G4 852 aaPredicted RBP9.73□□□□□ -0.85
COMMD3-215ENST00000602574 DEPDC1Q5TB30 811 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 IL23RQ5VWK5 629 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 ZNF662Q6ZS27 426 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 C3orf67Q6ZVT6 689 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 NLRP14Q86W24 1093 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 AGAP11Q8TF27 550 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 LENG1Q96BZ8 264 aaPredicted RBP9.73□□□□□ -0.85
COMMD3-215ENST00000602574 SYT15Q9BQS2 421 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 CHMP3Q9Y3E7 222 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 TMEM94Q12767 1356 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 ARAP3Q8WWN8 1544 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 KANSL1LA0AUZ9 987 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 OPLAHO14841 1288 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 PPP1R37O75864 691 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 LDHBP07195 334 aaKnown RBP9.73□□□□□ -0.85
COMMD3-215ENST00000602574 GSTT2P0CG29 244 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 GSTT2BP0CG30 244 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 GNAT2P19087 354 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 APBA1Q02410 837 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 ZNF713Q8N859 430 aaPredicted RBP9.73□□□□□ -0.85
COMMD3-215ENST00000602574 HIC2Q96JB3 615 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 SRPK1Q96SB4 655 aaKnown RBP9.73□□□□□ -0.85
COMMD3-215ENST00000602574 EHD4Q9H223 541 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 TPK1Q9H3S4 243 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 AASDHPPTQ9NRN7 309 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 KRT82Q9NSB4 513 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 PDP2Q9P2J9 529 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 SAP30BPQ9UHR5 308 aaKnown RBP9.73□□□□□ -0.85
COMMD3-215ENST00000602574 FAM184BQ9ULE4 1060 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 KDM6AO15550 1401 aaPredicted RBP9.73□□□□□ -0.85
COMMD3-215ENST00000602574 VWDEQ8N2E2 1590 aa9.73□□□□□ -0.85
COMMD3-215ENST00000602574 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.72□□□□□ -0.85
COMMD3-215ENST00000602574 SPECC1L-ADORA2AF8WAN1 911 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 MAP3K13O43283 966 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 FBXO21O94952 628 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 ATP2A2P16615 1042 aaKnown RBP9.72□□□□□ -0.85
COMMD3-215ENST00000602574 PDE6CP51160 858 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 HPCAP84074 193 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 DR1Q01658 176 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 P3H1Q32P28 736 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 TMEM259Q4ZIN3 620 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 FAM209AQ5JX71 171 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 CFAP58Q5T655 872 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 SYDE2Q5VT97 1194 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 ITPRIPQ8IWB1 547 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 CHCHD4Q8N4Q1 142 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 MAML1Q92585 1016 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 CCDC42Q96M95 316 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 CCT8L2Q96SF2 557 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 HGH1Q9BTY7 390 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 NPHP4O75161 1426 aaPredicted RBP9.72□□□□□ -0.85
COMMD3-215ENST00000602574 KAT6BQ8WYB5 2073 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 MAP3K7O43318 606 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 FOXD2O60548 495 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms