RNA–Protein interactions for RNA: ENST00000602351.5

PPFIA3-203, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 5 BASIC

Gene PPFIA3, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-203ENST00000602351 MIGA2Q7L4E1 593 aa16.4■□□□□ 0.22
PPFIA3-203ENST00000602351 CCDC50Q8IVM0 306 aa16.4■□□□□ 0.22
PPFIA3-203ENST00000602351 FMR1NBQ8N0W7 255 aaPredicted RBP16.4■□□□□ 0.22
PPFIA3-203ENST00000602351 TTLL6Q8N841 843 aa16.4■□□□□ 0.22
PPFIA3-203ENST00000602351 SAMSN1Q9NSI8 373 aaKnown RBP16.4■□□□□ 0.22
PPFIA3-203ENST00000602351 SMIM23A6NLE4 172 aa16.39■□□□□ 0.21
PPFIA3-203ENST00000602351 KIAA0753Q2KHM9 967 aa16.39■□□□□ 0.21
PPFIA3-203ENST00000602351 STOX1Q6ZVD7 989 aa16.39■□□□□ 0.21
PPFIA3-203ENST00000602351 SUPT20HQ8NEM7 779 aa16.39■□□□□ 0.21
PPFIA3-203ENST00000602351 SELENOSQ9BQE4 189 aa16.39■□□□□ 0.21
PPFIA3-203ENST00000602351 SELENOOQ9BVL4 669 aa16.39■□□□□ 0.21
PPFIA3-203ENST00000602351 PLA2G12BQ9BX93 195 aa16.39■□□□□ 0.21
PPFIA3-203ENST00000602351 PSD3Q9NYI0 1048 aa16.39■□□□□ 0.21
PPFIA3-203ENST00000602351 CHD2O14647 1828 aaKnown RBP16.39■□□□□ 0.21
PPFIA3-203ENST00000602351 MAP3K9P80192 1104 aa16.39■□□□□ 0.21
PPFIA3-203ENST00000602351 TBC1D31Q96DN5 1066 aa16.39■□□□□ 0.21
PPFIA3-203ENST00000602351 GOLGA8KD6RF30 607 aa16.39■□□□□ 0.21
PPFIA3-203ENST00000602351 GUCY2FP51841 1108 aa16.39■□□□□ 0.21
PPFIA3-203ENST00000602351 ZBTB21Q9ULJ3 1066 aa16.39■□□□□ 0.21
PPFIA3-203ENST00000602351 KNDC1Q76NI1 1749 aa16.39■□□□□ 0.21
PPFIA3-203ENST00000602351 COBLO75128 1261 aa16.38■□□□□ 0.21
PPFIA3-203ENST00000602351 CORO7P57737 925 aa16.38■□□□□ 0.21
PPFIA3-203ENST00000602351 SF3B3Q15393 1217 aaKnown RBP16.38■□□□□ 0.21
PPFIA3-203ENST00000602351 HOOK3Q86VS8 718 aa16.38■□□□□ 0.21
PPFIA3-203ENST00000602351 GPR162Q16538 588 aa16.38■□□□□ 0.21
PPFIA3-203ENST00000602351 BLIDQ8IZY5 108 aa16.38■□□□□ 0.21
PPFIA3-203ENST00000602351 RPGRIP1Q96KN7 1286 aa16.38■□□□□ 0.21
PPFIA3-203ENST00000602351 MED1Q15648 1581 aaPredicted RBP16.38■□□□□ 0.21
PPFIA3-203ENST00000602351 TNS2Q63HR2 1409 aa16.38■□□□□ 0.21
PPFIA3-203ENST00000602351 SMCO2A6NFE2 343 aa16.38■□□□□ 0.21
PPFIA3-203ENST00000602351 TULP2O00295 520 aa16.38■□□□□ 0.21
PPFIA3-203ENST00000602351 SCG2P13521 617 aa16.38■□□□□ 0.21
PPFIA3-203ENST00000602351 TACO1Q9BSH4 297 aaKnown RBP16.38■□□□□ 0.21
PPFIA3-203ENST00000602351 IMPG2Q9BZV3 1241 aa16.38■□□□□ 0.21
PPFIA3-203ENST00000602351 HOMER2Q9NSB8 354 aa16.38■□□□□ 0.21
PPFIA3-203ENST00000602351 ZNF609O15014 1411 aa16.38■□□□□ 0.21
PPFIA3-203ENST00000602351 H3BQF6 201 aa16.38■□□□□ 0.21
PPFIA3-203ENST00000602351 BACH1O14867 736 aa16.38■□□□□ 0.21
PPFIA3-203ENST00000602351 CETN3O15182 167 aa16.38■□□□□ 0.21
PPFIA3-203ENST00000602351 PRPHP41219 470 aa16.38■□□□□ 0.21
PPFIA3-203ENST00000602351 SP4Q02446 784 aa16.38■□□□□ 0.21
PPFIA3-203ENST00000602351 MTF1Q14872 753 aa16.38■□□□□ 0.21
PPFIA3-203ENST00000602351 ZRSR2Q15696 482 aaKnown RBP16.38■□□□□ 0.21
PPFIA3-203ENST00000602351 SNCBQ16143 134 aa16.38■□□□□ 0.21
PPFIA3-203ENST00000602351 CALCRLQ16602 461 aa16.38■□□□□ 0.21
PPFIA3-203ENST00000602351 LMBR1Q8WVP7 490 aa16.38■□□□□ 0.21
PPFIA3-203ENST00000602351 UBLCP1Q8WVY7 318 aaPredicted RBP16.38■□□□□ 0.21
PPFIA3-203ENST00000602351 EPN1Q9Y6I3 576 aaPredicted RBP16.38■□□□□ 0.21
PPFIA3-203ENST00000602351 CNTNAP4Q9C0A0 1308 aa16.37■□□□□ 0.21
PPFIA3-203ENST00000602351 SASH3O75995 380 aa16.37■□□□□ 0.21
PPFIA3-203ENST00000602351 ACTN3Q08043 901 aaPredicted RBP16.37■□□□□ 0.21
PPFIA3-203ENST00000602351 PDCLQ13371 301 aa16.37■□□□□ 0.21
PPFIA3-203ENST00000602351 HERC4Q5GLZ8 1057 aaPredicted RBP16.37■□□□□ 0.21
PPFIA3-203ENST00000602351 DCAF17Q5H9S7 520 aaPredicted RBP16.37■□□□□ 0.21
PPFIA3-203ENST00000602351 CABP7Q86V35 215 aa16.37■□□□□ 0.21
PPFIA3-203ENST00000602351 KLRF2D3W0D1 207 aa16.37■□□□□ 0.21
PPFIA3-203ENST00000602351 PPP1R7Q15435 360 aa16.37■□□□□ 0.21
PPFIA3-203ENST00000602351 PACS2Q86VP3 889 aa16.37■□□□□ 0.21
PPFIA3-203ENST00000602351 RIN2Q8WYP3 895 aaPredicted RBP16.37■□□□□ 0.21
PPFIA3-203ENST00000602351 TDRD3Q9H7E2 651 aaKnown RBP16.37■□□□□ 0.21
PPFIA3-203ENST00000602351 NEDD4P46934 1319 aa16.37■□□□□ 0.21
PPFIA3-203ENST00000602351 HGSO14964 777 aaPredicted RBP16.37■□□□□ 0.21
PPFIA3-203ENST00000602351 CHUKO15111 745 aa16.37■□□□□ 0.21
PPFIA3-203ENST00000602351 GGCXP38435 758 aa16.37■□□□□ 0.21
PPFIA3-203ENST00000602351 MRPS25P82663 173 aaKnown RBP16.37■□□□□ 0.21
PPFIA3-203ENST00000602351 SLC39A14Q15043 492 aa16.37■□□□□ 0.21
PPFIA3-203ENST00000602351 POLR3EQ9NVU0 708 aa16.37■□□□□ 0.21
PPFIA3-203ENST00000602351 DDAH1O94760 285 aa16.36■□□□□ 0.21
PPFIA3-203ENST00000602351 BRD2P25440 801 aaKnown RBP16.36■□□□□ 0.21
PPFIA3-203ENST00000602351 EAPPQ56P03 285 aaPredicted RBP16.36■□□□□ 0.21
PPFIA3-203ENST00000602351 AP1ARQ63HQ0 302 aa16.36■□□□□ 0.21
PPFIA3-203ENST00000602351 CYB5R4Q7L1T6 521 aa16.36■□□□□ 0.21
PPFIA3-203ENST00000602351 IFT20Q8IY31 132 aa16.36■□□□□ 0.21
PPFIA3-203ENST00000602351 GSPT2Q8IYD1 628 aaKnown RBP16.36■□□□□ 0.21
PPFIA3-203ENST00000602351 OR8K1Q8NGG5 319 aa16.36■□□□□ 0.21
PPFIA3-203ENST00000602351 CCDC51Q96ER9 411 aa16.36■□□□□ 0.21
PPFIA3-203ENST00000602351 BRIP1Q9BX63 1249 aa16.36■□□□□ 0.21
PPFIA3-203ENST00000602351 ZBTB12Q9Y330 459 aaPredicted RBP16.36■□□□□ 0.21
PPFIA3-203ENST00000602351 GCOM1H8Y6P7 765 aaPredicted RBP16.36■□□□□ 0.21
PPFIA3-203ENST00000602351 MYZAPP0CAP1 466 aa16.36■□□□□ 0.21
PPFIA3-203ENST00000602351 TBC1D16Q8TBP0 767 aa16.36■□□□□ 0.21
PPFIA3-203ENST00000602351 HAUS4Q9H6D7 363 aa16.36■□□□□ 0.21
PPFIA3-203ENST00000602351 CHMP2AO43633 222 aa16.36■□□□□ 0.21
PPFIA3-203ENST00000602351 GRAMD1CQ8IYS0 662 aa16.36■□□□□ 0.21
PPFIA3-203ENST00000602351 RASGRP4Q8TDF6 673 aa16.36■□□□□ 0.21
PPFIA3-203ENST00000602351 GSG1L2A8MUP6 293 aa16.35■□□□□ 0.21
PPFIA3-203ENST00000602351 SLC16A2P36021 539 aa16.35■□□□□ 0.21
PPFIA3-203ENST00000602351 FOXR1Q6PIV2 292 aa16.35■□□□□ 0.21
PPFIA3-203ENST00000602351 SPATS2Q86XZ4 545 aaKnown RBP16.35■□□□□ 0.21
PPFIA3-203ENST00000602351 CSRNP1Q96S65 589 aa16.35■□□□□ 0.21
PPFIA3-203ENST00000602351 VIMP08670 466 aaKnown RBP16.35■□□□□ 0.21
PPFIA3-203ENST00000602351 KCNJ6P48051 423 aa16.35■□□□□ 0.21
PPFIA3-203ENST00000602351 RAPGEF1Q13905 1077 aa16.35■□□□□ 0.21
PPFIA3-203ENST00000602351 DYMQ7RTS9 669 aa16.35■□□□□ 0.21
PPFIA3-203ENST00000602351 RNF26Q9BY78 433 aaPredicted RBP16.35■□□□□ 0.21
PPFIA3-203ENST00000602351 ABCC12Q96J65 1359 aa16.35■□□□□ 0.21
PPFIA3-203ENST00000602351 EPB41P11171 864 aaKnown RBP16.35■□□□□ 0.21
PPFIA3-203ENST00000602351 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.35■□□□□ 0.21
PPFIA3-203ENST00000602351 SAMD15Q9P1V8 674 aa16.35■□□□□ 0.21
PPFIA3-203ENST00000602351 CLTAP09496 248 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms