RNA–Protein interactions for RNA: ENST00000601471.1

LINC00649-212, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-212ENST00000601471 SAMD3Q8N6K7 520 aa11.12□□□□□ -0.63
LINC00649-212ENST00000601471 IL17RAQ96F46 866 aa11.12□□□□□ -0.63
LINC00649-212ENST00000601471 PIGSQ96S52 555 aa11.12□□□□□ -0.63
LINC00649-212ENST00000601471 HTATIP2Q9BUP3 242 aa11.12□□□□□ -0.63
LINC00649-212ENST00000601471 C11orf49Q9H6J7 331 aa11.12□□□□□ -0.63
LINC00649-212ENST00000601471 MAP3K20Q9NYL2 800 aaKnown RBP11.12□□□□□ -0.63
LINC00649-212ENST00000601471 COL20A1Q9P218 1284 aa11.12□□□□□ -0.63
LINC00649-212ENST00000601471 BRPF3Q9ULD4 1205 aa11.12□□□□□ -0.63
LINC00649-212ENST00000601471 MRPL11Q9Y3B7 192 aaKnown RBP11.12□□□□□ -0.63
LINC00649-212ENST00000601471 SYNRGQ9UMZ2 1314 aa11.11□□□□□ -0.63
LINC00649-212ENST00000601471 RBM47A0AV96 593 aaKnown RBP11.11□□□□□ -0.63
LINC00649-212ENST00000601471 PTPDC1A2A3K4 754 aa11.11□□□□□ -0.63
LINC00649-212ENST00000601471 DHX16O60231 1041 aaKnown RBP11.11□□□□□ -0.63
LINC00649-212ENST00000601471 DUSP11O75319 330 aaKnown RBP11.11□□□□□ -0.63
LINC00649-212ENST00000601471 PLEKHA8P1O95397 391 aa11.11□□□□□ -0.63
LINC00649-212ENST00000601471 RARBP10826 455 aa11.11□□□□□ -0.63
LINC00649-212ENST00000601471 RPS6KB1P23443 525 aa11.11□□□□□ -0.63
LINC00649-212ENST00000601471 CST5P28325 142 aaPredicted RBP11.11□□□□□ -0.63
LINC00649-212ENST00000601471 GNAQP50148 359 aa11.11□□□□□ -0.63
LINC00649-212ENST00000601471 EVCP57679 992 aa11.11□□□□□ -0.63
LINC00649-212ENST00000601471 FUT2Q10981 343 aa11.11□□□□□ -0.63
LINC00649-212ENST00000601471 TRAF1Q13077 416 aa11.11□□□□□ -0.63
LINC00649-212ENST00000601471 CCDC144BQ3MJ40 725 aa11.11□□□□□ -0.63
LINC00649-212ENST00000601471 TAPT1Q6NXT6 567 aa11.11□□□□□ -0.63
LINC00649-212ENST00000601471 NFXL1Q6ZNB6 911 aa11.11□□□□□ -0.63
LINC00649-212ENST00000601471 MCF2L2Q86YR7 1114 aa11.11□□□□□ -0.63
LINC00649-212ENST00000601471 SRBD1Q8N5C6 995 aaKnown RBP11.11□□□□□ -0.63
LINC00649-212ENST00000601471 FANCBQ8NB91 859 aa11.11□□□□□ -0.63
LINC00649-212ENST00000601471 ARRDC4Q8NCT1 418 aa11.11□□□□□ -0.63
LINC00649-212ENST00000601471 SYTL5Q8TDW5 730 aaPredicted RBP11.11□□□□□ -0.63
LINC00649-212ENST00000601471 NUP133Q8WUM0 1156 aa11.11□□□□□ -0.63
LINC00649-212ENST00000601471 LENG1Q96BZ8 264 aaPredicted RBP11.11□□□□□ -0.63
LINC00649-212ENST00000601471 TCEANC2Q96MN5 208 aa11.11□□□□□ -0.63
LINC00649-212ENST00000601471 JAKMIP1Q96N16 626 aaKnown RBP11.11□□□□□ -0.63
LINC00649-212ENST00000601471 TM6SF1Q9BZW5 370 aa11.11□□□□□ -0.63
LINC00649-212ENST00000601471 UPF3AQ9H1J1 476 aaKnown RBP11.11□□□□□ -0.63
LINC00649-212ENST00000601471 ZSWIM6Q9HCJ5 1215 aa11.11□□□□□ -0.63
LINC00649-212ENST00000601471 VAT1LQ9HCJ6 419 aa11.11□□□□□ -0.63
LINC00649-212ENST00000601471 VTA1Q9NP79 307 aa11.11□□□□□ -0.63
LINC00649-212ENST00000601471 XPNPEP3Q9NQH7 507 aa11.11□□□□□ -0.63
LINC00649-212ENST00000601471 ZHX1Q9UKY1 873 aaPredicted RBP11.11□□□□□ -0.63
LINC00649-212ENST00000601471 FAM184BQ9ULE4 1060 aa11.11□□□□□ -0.63
LINC00649-212ENST00000601471 PCDHA1Q9Y5I3 950 aa11.11□□□□□ -0.63
LINC00649-212ENST00000601471 DDX49Q9Y6V7 483 aaKnown RBP11.11□□□□□ -0.63
LINC00649-212ENST00000601471 FRMPD4Q14CM0 1322 aa11.1□□□□□ -0.63
LINC00649-212ENST00000601471 CNTNAP5Q8WYK1 1306 aa11.1□□□□□ -0.63
LINC00649-212ENST00000601471 KIAA1217Q5T5P2 1943 aa11.1□□□□□ -0.63
LINC00649-212ENST00000601471 CTAGE5O15320 804 aa11.1□□□□□ -0.63
LINC00649-212ENST00000601471 CPA1P15085 419 aa11.1□□□□□ -0.63
LINC00649-212ENST00000601471 RXRAP19793 462 aa11.1□□□□□ -0.63
LINC00649-212ENST00000601471 CALML3P27482 149 aa11.1□□□□□ -0.63
LINC00649-212ENST00000601471 SNX17Q15036 470 aa11.1□□□□□ -0.63
LINC00649-212ENST00000601471 LRRC41Q15345 812 aa11.1□□□□□ -0.63
LINC00649-212ENST00000601471 C1orf53Q5VUE5 145 aa11.1□□□□□ -0.63
LINC00649-212ENST00000601471 ANO1Q5XXA6 986 aa11.1□□□□□ -0.63
LINC00649-212ENST00000601471 BLOC1S2Q6QNY1 142 aa11.1□□□□□ -0.63
LINC00649-212ENST00000601471 MICU3Q86XE3 530 aa11.1□□□□□ -0.63
LINC00649-212ENST00000601471 HOMER1Q86YM7 354 aa11.1□□□□□ -0.63
LINC00649-212ENST00000601471 KLHDC9Q8NEP7 349 aa11.1□□□□□ -0.63
LINC00649-212ENST00000601471 TBC1D5Q92609 795 aa11.1□□□□□ -0.63
LINC00649-212ENST00000601471 FAM217BQ9NTX9 383 aaPredicted RBP11.1□□□□□ -0.63
LINC00649-212ENST00000601471 PHF24Q9UPV7 400 aa11.1□□□□□ -0.63
LINC00649-212ENST00000601471 GNEQ9Y223 722 aaKnown RBP11.1□□□□□ -0.63
LINC00649-212ENST00000601471 ZBTB43O43298 467 aa11.09□□□□□ -0.63
LINC00649-212ENST00000601471 CASTP20810 708 aaKnown RBP11.09□□□□□ -0.63
LINC00649-212ENST00000601471 PSMA5P28066 241 aa11.09□□□□□ -0.63
LINC00649-212ENST00000601471 GJA9P57773 515 aa11.09□□□□□ -0.63
LINC00649-212ENST00000601471 ANAPC15P60006 121 aa11.09□□□□□ -0.63
LINC00649-212ENST00000601471 PPP2R5BQ15173 497 aa11.09□□□□□ -0.63
LINC00649-212ENST00000601471 RUFY3Q7L099 469 aa11.09□□□□□ -0.63
LINC00649-212ENST00000601471 RNF180Q86T96 592 aa11.09□□□□□ -0.63
LINC00649-212ENST00000601471 FBXO16Q8IX29 292 aaPredicted RBP11.09□□□□□ -0.63
LINC00649-212ENST00000601471 RRP36Q96EU6 259 aaKnown RBP11.09□□□□□ -0.63
LINC00649-212ENST00000601471 IWS1Q96ST2 819 aa11.09□□□□□ -0.63
LINC00649-212ENST00000601471 RBM28Q9NW13 759 aaKnown RBP11.09□□□□□ -0.63
LINC00649-212ENST00000601471 CDH23Q9H251 3354 aa11.09□□□□□ -0.63
LINC00649-212ENST00000601471 LTBP2Q14767 1821 aa11.08□□□□□ -0.64
LINC00649-212ENST00000601471 KLF18A0A0U1RQI7 1052 aa11.08□□□□□ -0.64
LINC00649-212ENST00000601471 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.08□□□□□ -0.64
LINC00649-212ENST00000601471 PIK3CDO00329 1044 aa11.08□□□□□ -0.64
LINC00649-212ENST00000601471 PGK1P00558 417 aa11.08□□□□□ -0.64
LINC00649-212ENST00000601471 SMPD1P17405 629 aa11.08□□□□□ -0.64
LINC00649-212ENST00000601471 ADCYAP1R1P41586 468 aa11.08□□□□□ -0.64
LINC00649-212ENST00000601471 RTN1Q16799 776 aa11.08□□□□□ -0.64
LINC00649-212ENST00000601471 GJC2Q5T442 439 aaPredicted RBP11.08□□□□□ -0.64
LINC00649-212ENST00000601471 IQSEC1Q6DN90 963 aa11.08□□□□□ -0.64
LINC00649-212ENST00000601471 Q6ZUG5 572 aa11.08□□□□□ -0.64
LINC00649-212ENST00000601471 RAB11FIP4Q86YS3 637 aa11.08□□□□□ -0.64
LINC00649-212ENST00000601471 TEX2Q8IWB9 1127 aa11.08□□□□□ -0.64
LINC00649-212ENST00000601471 CMTR1Q8N1G2 835 aaKnown RBP11.08□□□□□ -0.64
LINC00649-212ENST00000601471 NSUN6Q8TEA1 469 aaKnown RBP11.08□□□□□ -0.64
LINC00649-212ENST00000601471 BRF1Q92994 677 aa11.08□□□□□ -0.64
LINC00649-212ENST00000601471 TAAR1Q96RJ0 339 aa11.08□□□□□ -0.64
LINC00649-212ENST00000601471 RMDN3Q96TC7 470 aa11.08□□□□□ -0.64
LINC00649-212ENST00000601471 MPHOSPH6Q99547 160 aaKnown RBP11.08□□□□□ -0.64
LINC00649-212ENST00000601471 TSEN34Q9BSV6 310 aaKnown RBP11.08□□□□□ -0.64
LINC00649-212ENST00000601471 PXMP2Q9NR77 195 aa11.08□□□□□ -0.64
LINC00649-212ENST00000601471 PDGFCQ9NRA1 345 aa11.08□□□□□ -0.64
LINC00649-212ENST00000601471 Q9Y3F1 56 aa11.08□□□□□ -0.64
LINC00649-212ENST00000601471 MYADML2A6NDP7 307 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms